RNA–Protein interactions for RNA: ENST00000427494.6

APOBEC3D-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3D, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-202ENST00000427494 RPF1Q9H9Y2 349 aaKnown RBP14.92□□□□□ -0.02
APOBEC3D-202ENST00000427494 IFT122Q9HBG6 1241 aa14.92□□□□□ -0.02
APOBEC3D-202ENST00000427494 ZHX1Q9UKY1 873 aaPredicted RBP14.92□□□□□ -0.02
APOBEC3D-202ENST00000427494 MTUS1Q9ULD2 1270 aa14.92□□□□□ -0.02
APOBEC3D-202ENST00000427494 A0A087WZ62 844 aa14.91□□□□□ -0.02
APOBEC3D-202ENST00000427494 TCRBV7S2A1N4TA0A589 114 aa14.91□□□□□ -0.02
APOBEC3D-202ENST00000427494 B4GALT4O60513 344 aa14.91□□□□□ -0.02
APOBEC3D-202ENST00000427494 CSDE1O75534 798 aaKnown RBP14.91□□□□□ -0.02
APOBEC3D-202ENST00000427494 IL18RAPO95256 599 aa14.91□□□□□ -0.02
APOBEC3D-202ENST00000427494 SNAI1O95863 264 aaPredicted RBP14.91□□□□□ -0.02
APOBEC3D-202ENST00000427494 SLC1A1P43005 524 aa14.91□□□□□ -0.02
APOBEC3D-202ENST00000427494 TTMPQ5BVD1 217 aa14.91□□□□□ -0.02
APOBEC3D-202ENST00000427494 GPR142Q7Z601 462 aa14.91□□□□□ -0.02
APOBEC3D-202ENST00000427494 ZNF467Q7Z7K2 595 aaPredicted RBP14.91□□□□□ -0.02
APOBEC3D-202ENST00000427494 DPP9Q86TI2 863 aa14.91□□□□□ -0.02
APOBEC3D-202ENST00000427494 TMEM192Q8IY95 271 aa14.91□□□□□ -0.02
APOBEC3D-202ENST00000427494 ZDHHC14Q8IZN3 488 aa14.91□□□□□ -0.02
APOBEC3D-202ENST00000427494 LINC01465Q8N7H1 131 aa14.91□□□□□ -0.02
APOBEC3D-202ENST00000427494 EMID1Q96A84 441 aaPredicted RBP14.91□□□□□ -0.02
APOBEC3D-202ENST00000427494 VCPIP1Q96JH7 1222 aa14.91□□□□□ -0.02
APOBEC3D-202ENST00000427494 FDXACB1Q9BRP7 624 aaPredicted RBP14.91□□□□□ -0.02
APOBEC3D-202ENST00000427494 ERP44Q9BS26 406 aa14.91□□□□□ -0.02
APOBEC3D-202ENST00000427494 PLVAPQ9BX97 442 aa14.91□□□□□ -0.02
APOBEC3D-202ENST00000427494 KATNBL1Q9H079 304 aa14.91□□□□□ -0.02
APOBEC3D-202ENST00000427494 ZMYND15Q9H091 742 aa14.91□□□□□ -0.02
APOBEC3D-202ENST00000427494 CISHQ9NSE2 258 aa14.91□□□□□ -0.02
APOBEC3D-202ENST00000427494 PLAAQ9Y263 795 aa14.91□□□□□ -0.02
APOBEC3D-202ENST00000427494 COL1A2P08123 1366 aa14.91□□□□□ -0.02
APOBEC3D-202ENST00000427494 FLT3P36888 993 aa14.91□□□□□ -0.02
APOBEC3D-202ENST00000427494 POU5F1BQ06416 359 aa14.91□□□□□ -0.02
APOBEC3D-202ENST00000427494 C1QBPQ07021 282 aaKnown RBP14.91□□□□□ -0.02
APOBEC3D-202ENST00000427494 ZNF394Q53GI3 561 aa14.91□□□□□ -0.02
APOBEC3D-202ENST00000427494 DUPD1Q68J44 220 aa14.91□□□□□ -0.02
APOBEC3D-202ENST00000427494 TTC27Q6P3X3 843 aa14.91□□□□□ -0.02
APOBEC3D-202ENST00000427494 ARL8AQ96BM9 186 aa14.91□□□□□ -0.02
APOBEC3D-202ENST00000427494 GBA2Q9HCG7 927 aaPredicted RBP14.91□□□□□ -0.02
APOBEC3D-202ENST00000427494 MRPL47Q9HD33 250 aaKnown RBP14.91□□□□□ -0.02
APOBEC3D-202ENST00000427494 PCYOX1Q9UHG3 505 aa14.91□□□□□ -0.02
APOBEC3D-202ENST00000427494 SCINQ9Y6U3 715 aa14.91□□□□□ -0.02
APOBEC3D-202ENST00000427494 GPR25O00155 361 aa14.9□□□□□ -0.02
APOBEC3D-202ENST00000427494 KRT14P02533 472 aa14.9□□□□□ -0.02
APOBEC3D-202ENST00000427494 VTNP04004 478 aa14.9□□□□□ -0.02
APOBEC3D-202ENST00000427494 KRT19P08727 400 aa14.9□□□□□ -0.02
APOBEC3D-202ENST00000427494 WEE2P0C1S8 567 aa14.9□□□□□ -0.02
APOBEC3D-202ENST00000427494 CAPN2P17655 700 aa14.9□□□□□ -0.02
APOBEC3D-202ENST00000427494 BRD2P25440 801 aaKnown RBP14.9□□□□□ -0.02
APOBEC3D-202ENST00000427494 TMOD1P28289 359 aa14.9□□□□□ -0.02
APOBEC3D-202ENST00000427494 HSD17B3P37058 310 aa14.9□□□□□ -0.02
APOBEC3D-202ENST00000427494 PTGIRP43119 386 aa14.9□□□□□ -0.02
APOBEC3D-202ENST00000427494 PTP4A2Q12974 167 aa14.9□□□□□ -0.02
APOBEC3D-202ENST00000427494 MAMLD1Q13495 774 aa14.9□□□□□ -0.02
APOBEC3D-202ENST00000427494 SIX1Q15475 284 aaPredicted RBP14.9□□□□□ -0.02
APOBEC3D-202ENST00000427494 FAM187BQ17R55 369 aa14.9□□□□□ -0.02
APOBEC3D-202ENST00000427494 CCDC137Q6PK04 289 aaKnown RBP14.9□□□□□ -0.02
APOBEC3D-202ENST00000427494 CD302Q8IX05 232 aa14.9□□□□□ -0.02
APOBEC3D-202ENST00000427494 CPB2Q96IY4 423 aa14.9□□□□□ -0.02
APOBEC3D-202ENST00000427494 C16orf70Q9BSU1 422 aa14.9□□□□□ -0.02
APOBEC3D-202ENST00000427494 PROSCO94903 275 aa14.89□□□□□ -0.03
APOBEC3D-202ENST00000427494 NFICP08651 508 aa14.89□□□□□ -0.03
APOBEC3D-202ENST00000427494 RARAP10276 462 aa14.89□□□□□ -0.03
APOBEC3D-202ENST00000427494 MCF2P10911 925 aa14.89□□□□□ -0.03
APOBEC3D-202ENST00000427494 ASPAP45381 313 aa14.89□□□□□ -0.03
APOBEC3D-202ENST00000427494 TNFAIP2Q03169 654 aa14.89□□□□□ -0.03
APOBEC3D-202ENST00000427494 GRB14Q14449 540 aa14.89□□□□□ -0.03
APOBEC3D-202ENST00000427494 LLGL1Q15334 1064 aa14.89□□□□□ -0.03
APOBEC3D-202ENST00000427494 UAP1Q16222 522 aaPredicted RBP14.89□□□□□ -0.03
APOBEC3D-202ENST00000427494 AMHR2Q16671 573 aa14.89□□□□□ -0.03
APOBEC3D-202ENST00000427494 CYP1B1Q16678 543 aa14.89□□□□□ -0.03
APOBEC3D-202ENST00000427494 PLEKHA7Q6IQ23 1121 aa14.89□□□□□ -0.03
APOBEC3D-202ENST00000427494 MTHFD1LQ6UB35 978 aa14.89□□□□□ -0.03
APOBEC3D-202ENST00000427494 MAML3Q96JK9 1138 aa14.89□□□□□ -0.03
APOBEC3D-202ENST00000427494 PARK7Q99497 189 aaKnown RBP14.89□□□□□ -0.03
APOBEC3D-202ENST00000427494 XYLT2Q9H1B5 865 aa14.89□□□□□ -0.03
APOBEC3D-202ENST00000427494 PDZD7Q9H5P4 517 aa14.89□□□□□ -0.03
APOBEC3D-202ENST00000427494 NXF1Q9UBU9 619 aaKnown RBP14.89□□□□□ -0.03
APOBEC3D-202ENST00000427494 PRDM4Q9UKN5 801 aa14.89□□□□□ -0.03
APOBEC3D-202ENST00000427494 POLIQ9UNA4 740 aa14.89□□□□□ -0.03
APOBEC3D-202ENST00000427494 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.89□□□□□ -0.03
APOBEC3D-202ENST00000427494 LACTBL1A8MY62 500 aa14.89□□□□□ -0.03
APOBEC3D-202ENST00000427494 H3BRB1 525 aa14.89□□□□□ -0.03
APOBEC3D-202ENST00000427494 ZEB2O60315 1214 aa14.89□□□□□ -0.03
APOBEC3D-202ENST00000427494 GJB6O95452 261 aa14.89□□□□□ -0.03
APOBEC3D-202ENST00000427494 STAG3L1P0CL83 205 aa14.89□□□□□ -0.03
APOBEC3D-202ENST00000427494 SMPD1P17405 629 aa14.89□□□□□ -0.03
APOBEC3D-202ENST00000427494 COILP38432 576 aaPredicted RBP14.89□□□□□ -0.03
APOBEC3D-202ENST00000427494 YWHAEP62258 255 aaKnown RBP14.89□□□□□ -0.03
APOBEC3D-202ENST00000427494 FKBP1BP68106 108 aa14.89□□□□□ -0.03
APOBEC3D-202ENST00000427494 MTMR3Q13615 1198 aa14.89□□□□□ -0.03
APOBEC3D-202ENST00000427494 DAB2IPQ5VWQ8 1189 aa14.89□□□□□ -0.03
APOBEC3D-202ENST00000427494 TMC3Q7Z5M5 1100 aa14.89□□□□□ -0.03
APOBEC3D-202ENST00000427494 IFNLR1Q8IU57 520 aaPredicted RBP14.89□□□□□ -0.03
APOBEC3D-202ENST00000427494 CCDC105Q8IYK2 499 aa14.89□□□□□ -0.03
APOBEC3D-202ENST00000427494 C1orf131Q8NDD1 294 aaKnown RBP14.89□□□□□ -0.03
APOBEC3D-202ENST00000427494 OR6J1Q8NGC5 347 aa14.89□□□□□ -0.03
APOBEC3D-202ENST00000427494 UBLCP1Q8WVY7 318 aaPredicted RBP14.89□□□□□ -0.03
APOBEC3D-202ENST00000427494 NLRP7Q8WX94 980 aa14.89□□□□□ -0.03
APOBEC3D-202ENST00000427494 RUNDC3BQ96NL0 473 aa14.89□□□□□ -0.03
APOBEC3D-202ENST00000427494 SCLT1Q96NL6 688 aa14.89□□□□□ -0.03
APOBEC3D-202ENST00000427494 FMO2Q99518 471 aa14.89□□□□□ -0.03
APOBEC3D-202ENST00000427494 TUT1Q9H6E5 874 aaKnown RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms