RNA–Protein interactions for RNA: ENST00000426180.1

HERPUD2-204, Transcript of HERPUD family member 2, humanhuman

TSL 5

Gene HERPUD2, Length 757 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-204ENST00000426180 TMEM174Q8WUU8 243 aa6.2□□□□□ -1.42
HERPUD2-204ENST00000426180 BCL7CQ8WUZ0 217 aaPredicted RBP6.2□□□□□ -1.42
HERPUD2-204ENST00000426180 SYAP1Q96A49 352 aaPredicted RBP6.2□□□□□ -1.42
HERPUD2-204ENST00000426180 BORCS6Q96GS4 357 aa6.2□□□□□ -1.42
HERPUD2-204ENST00000426180 MFSD14AQ96MC6 490 aa6.2□□□□□ -1.42
HERPUD2-204ENST00000426180 PPP1R10Q96QC0 940 aaKnown RBP6.2□□□□□ -1.42
HERPUD2-204ENST00000426180 PAAF1Q9BRP4 392 aa6.2□□□□□ -1.42
HERPUD2-204ENST00000426180 C17orf80Q9BSJ5 609 aa6.2□□□□□ -1.42
HERPUD2-204ENST00000426180 GTPBP4Q9BZE4 634 aaKnown RBP6.2□□□□□ -1.42
HERPUD2-204ENST00000426180 NRDE2Q9H7Z3 1164 aa6.2□□□□□ -1.42
HERPUD2-204ENST00000426180 RPF1Q9H9Y2 349 aaKnown RBP6.2□□□□□ -1.42
HERPUD2-204ENST00000426180 CERS4Q9HA82 394 aa6.2□□□□□ -1.42
HERPUD2-204ENST00000426180 POLMQ9NP87 494 aaPredicted RBP6.2□□□□□ -1.42
HERPUD2-204ENST00000426180 UBN1Q9NPG3 1134 aa6.2□□□□□ -1.42
HERPUD2-204ENST00000426180 ANO10Q9NW15 660 aa6.2□□□□□ -1.42
HERPUD2-204ENST00000426180 RBAKQ9NYW8 714 aaPredicted RBP6.2□□□□□ -1.42
HERPUD2-204ENST00000426180 CNTN3Q9P232 1028 aa6.2□□□□□ -1.42
HERPUD2-204ENST00000426180 CGNQ9P2M7 1197 aaKnown RBP6.2□□□□□ -1.42
HERPUD2-204ENST00000426180 TUBGCP4Q9UGJ1 667 aa6.2□□□□□ -1.42
HERPUD2-204ENST00000426180 INSL6Q9Y581 213 aa6.2□□□□□ -1.42
HERPUD2-204ENST00000426180 PCDHA11Q9Y5I1 949 aa6.2□□□□□ -1.42
HERPUD2-204ENST00000426180 MYH11P35749 1972 aa6.2□□□□□ -1.42
HERPUD2-204ENST00000426180 A0A1W2PPC1 479 aa6.19□□□□□ -1.42
HERPUD2-204ENST00000426180 CASTOR2A6NHX0 329 aa6.19□□□□□ -1.42
HERPUD2-204ENST00000426180 ZNF233A6NK53 670 aa6.19□□□□□ -1.42
HERPUD2-204ENST00000426180 LRRIQ3A6PVS8 624 aaPredicted RBP6.19□□□□□ -1.42
HERPUD2-204ENST00000426180 RFXAPO00287 272 aa6.19□□□□□ -1.42
HERPUD2-204ENST00000426180 KIAA0391O15091 583 aaKnown RBP6.19□□□□□ -1.42
HERPUD2-204ENST00000426180 CETN3O15182 167 aa6.19□□□□□ -1.42
HERPUD2-204ENST00000426180 LETM1O95202 739 aaPredicted RBP6.19□□□□□ -1.42
HERPUD2-204ENST00000426180 LDHAP00338 332 aaKnown RBP6.19□□□□□ -1.42
HERPUD2-204ENST00000426180 ITGB1P05556 798 aa6.19□□□□□ -1.42
HERPUD2-204ENST00000426180 THP07101 528 aa6.19□□□□□ -1.42
HERPUD2-204ENST00000426180 TRIM49P0CI25 452 aa6.19□□□□□ -1.42
HERPUD2-204ENST00000426180 TRIM49CP0CI26 452 aa6.19□□□□□ -1.42
HERPUD2-204ENST00000426180 ERCC5P28715 1186 aaPredicted RBP6.19□□□□□ -1.42
HERPUD2-204ENST00000426180 SMAD3P84022 425 aaKnown RBP6.19□□□□□ -1.42
HERPUD2-204ENST00000426180 PTK2Q05397 1052 aa6.19□□□□□ -1.42
HERPUD2-204ENST00000426180 RNASELQ05823 741 aaKnown RBP6.19□□□□□ -1.42
HERPUD2-204ENST00000426180 LRRC63Q05C16 580 aa6.19□□□□□ -1.42
HERPUD2-204ENST00000426180 PPP2R3AQ06190 1150 aa6.19□□□□□ -1.42
HERPUD2-204ENST00000426180 DSC1Q08554 894 aa6.19□□□□□ -1.42
HERPUD2-204ENST00000426180 MYBPC2Q14324 1141 aa6.19□□□□□ -1.42
HERPUD2-204ENST00000426180 NCAPHQ15003 741 aa6.19□□□□□ -1.42
HERPUD2-204ENST00000426180 PSMD6Q15008 389 aa6.19□□□□□ -1.42
HERPUD2-204ENST00000426180 ZBTB6Q15916 424 aa6.19□□□□□ -1.42
HERPUD2-204ENST00000426180 LRIT3Q3SXY7 679 aa6.19□□□□□ -1.42
HERPUD2-204ENST00000426180 HSP90AA4PQ58FG1 418 aa6.19□□□□□ -1.42
HERPUD2-204ENST00000426180 INTS6LQ5JSJ4 861 aaKnown RBP6.19□□□□□ -1.42
HERPUD2-204ENST00000426180 HABP4Q5JVS0 413 aaKnown RBP6.19□□□□□ -1.42
HERPUD2-204ENST00000426180 TMEM173Q86WV6 379 aaPredicted RBP6.19□□□□□ -1.42
HERPUD2-204ENST00000426180 DHX40Q8IX18 779 aaKnown RBP6.19□□□□□ -1.42
HERPUD2-204ENST00000426180 COLGALT2Q8IYK4 626 aa6.19□□□□□ -1.42
HERPUD2-204ENST00000426180 FAM186BQ8IYM0 893 aa6.19□□□□□ -1.42
HERPUD2-204ENST00000426180 HACE1Q8IYU2 909 aa6.19□□□□□ -1.42
HERPUD2-204ENST00000426180 ABI1Q8IZP0 508 aa6.19□□□□□ -1.42
HERPUD2-204ENST00000426180 LRRC43Q8N309 656 aa6.19□□□□□ -1.42
HERPUD2-204ENST00000426180 FIBCD1Q8N539 461 aa6.19□□□□□ -1.42
HERPUD2-204ENST00000426180 CSGALNACT2Q8N6G5 542 aa6.19□□□□□ -1.42
HERPUD2-204ENST00000426180 COLGALT1Q8NBJ5 622 aa6.19□□□□□ -1.42
HERPUD2-204ENST00000426180 C3orf58Q8NDZ4 430 aa6.19□□□□□ -1.42
HERPUD2-204ENST00000426180 CXorf38Q8TB03 319 aa6.19□□□□□ -1.42
HERPUD2-204ENST00000426180 URGCPQ8TCY9 931 aa6.19□□□□□ -1.42
HERPUD2-204ENST00000426180 LRRN4Q8WUT4 740 aa6.19□□□□□ -1.42
HERPUD2-204ENST00000426180 ELMO3Q96BJ8 720 aa6.19□□□□□ -1.42
HERPUD2-204ENST00000426180 CCDC127Q96BQ5 260 aa6.19□□□□□ -1.42
HERPUD2-204ENST00000426180 TSG101Q99816 390 aa6.19□□□□□ -1.42
HERPUD2-204ENST00000426180 VN1R3Q9BXE9 311 aa6.19□□□□□ -1.42
HERPUD2-204ENST00000426180 SRRTQ9BXP5 876 aaKnown RBP6.19□□□□□ -1.42
HERPUD2-204ENST00000426180 HSD3B7Q9H2F3 369 aa6.19□□□□□ -1.42
HERPUD2-204ENST00000426180 TTYH1Q9H313 450 aaPredicted RBP6.19□□□□□ -1.42
HERPUD2-204ENST00000426180 ZNF395Q9H8N7 513 aaPredicted RBP6.19□□□□□ -1.42
HERPUD2-204ENST00000426180 PLEKHA5Q9HAU0 1116 aa6.19□□□□□ -1.42
HERPUD2-204ENST00000426180 SAMSN1Q9NSI8 373 aaKnown RBP6.19□□□□□ -1.42
HERPUD2-204ENST00000426180 MTUS1Q9ULD2 1270 aa6.19□□□□□ -1.42
HERPUD2-204ENST00000426180 PRG3Q9Y2Y8 225 aaPredicted RBP6.19□□□□□ -1.42
HERPUD2-204ENST00000426180 TTC3P53804 2025 aa6.18□□□□□ -1.42
HERPUD2-204ENST00000426180 BICDL2A1A5D9 508 aa6.18□□□□□ -1.42
HERPUD2-204ENST00000426180 I3L4J1 428 aa6.18□□□□□ -1.42
HERPUD2-204ENST00000426180 NRP1O14786 923 aa6.18□□□□□ -1.42
HERPUD2-204ENST00000426180 SLC16A3O15427 465 aaKnown RBP6.18□□□□□ -1.42
HERPUD2-204ENST00000426180 ZC3H11AO75152 810 aaKnown RBP eCLIP6.18□□□□□ -1.42
HERPUD2-204ENST00000426180 LRRN2O75325 713 aa6.18□□□□□ -1.42
HERPUD2-204ENST00000426180 IL18RAPO95256 599 aa6.18□□□□□ -1.42
HERPUD2-204ENST00000426180 VNN1O95497 513 aa6.18□□□□□ -1.42
HERPUD2-204ENST00000426180 IGHA1P01876 353 aa6.18□□□□□ -1.42
HERPUD2-204ENST00000426180 GALTP07902 379 aa6.18□□□□□ -1.42
HERPUD2-204ENST00000426180 CCDC192P0DO97 292 aa6.18□□□□□ -1.42
HERPUD2-204ENST00000426180 DLATP10515 647 aaKnown RBP6.18□□□□□ -1.42
HERPUD2-204ENST00000426180 RPL13P26373 211 aaKnown RBP6.18□□□□□ -1.42
HERPUD2-204ENST00000426180 PSMC2P35998 433 aaKnown RBP6.18□□□□□ -1.42
HERPUD2-204ENST00000426180 BMPR1AP36894 532 aa6.18□□□□□ -1.42
HERPUD2-204ENST00000426180 PPP1R2P41236 205 aa6.18□□□□□ -1.42
HERPUD2-204ENST00000426180 OR1G1P47890 313 aa6.18□□□□□ -1.42
HERPUD2-204ENST00000426180 CLCNKBP51801 687 aa6.18□□□□□ -1.42
HERPUD2-204ENST00000426180 BCAR1P56945 870 aa6.18□□□□□ -1.42
HERPUD2-204ENST00000426180 MCCD1P59942 119 aaPredicted RBP6.18□□□□□ -1.42
HERPUD2-204ENST00000426180 ERVK-21P61565 698 aa6.18□□□□□ -1.42
HERPUD2-204ENST00000426180 TFAMQ00059 246 aaKnown RBP6.18□□□□□ -1.42
HERPUD2-204ENST00000426180 FKBP3Q00688 224 aaKnown RBP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms