RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 ATRNL1Q5VV63 1379 aa7.97□□□□□ -1.13
SMARCC1-202ENST00000425518 UNC5CO95185 931 aa7.97□□□□□ -1.13
SMARCC1-202ENST00000425518 TCF4P15884 667 aa7.97□□□□□ -1.13
SMARCC1-202ENST00000425518 GCNT1Q02742 428 aa7.97□□□□□ -1.13
SMARCC1-202ENST00000425518 TRIM68Q6AZZ1 485 aa7.97□□□□□ -1.13
SMARCC1-202ENST00000425518 MCF2L2Q86YR7 1114 aa7.97□□□□□ -1.13
SMARCC1-202ENST00000425518 ANKMY2Q8IV38 441 aa7.97□□□□□ -1.13
SMARCC1-202ENST00000425518 ZBED8Q8IZ13 594 aa7.97□□□□□ -1.13
SMARCC1-202ENST00000425518 OGFOD1Q8N543 542 aa7.97□□□□□ -1.13
SMARCC1-202ENST00000425518 LRRC8CQ8TDW0 803 aa7.97□□□□□ -1.13
SMARCC1-202ENST00000425518 FAM151AQ8WW52 585 aa7.97□□□□□ -1.13
SMARCC1-202ENST00000425518 MAML1Q92585 1016 aa7.97□□□□□ -1.13
SMARCC1-202ENST00000425518 SMC6Q96SB8 1091 aa7.97□□□□□ -1.13
SMARCC1-202ENST00000425518 QTRT2Q9H974 415 aaKnown RBP7.97□□□□□ -1.13
SMARCC1-202ENST00000425518 AVENQ9NQS1 362 aaPredicted RBP7.97□□□□□ -1.13
SMARCC1-202ENST00000425518 ZNF536O15090 1300 aa7.97□□□□□ -1.13
SMARCC1-202ENST00000425518 SPDYE2BA6NHP3 402 aa7.97□□□□□ -1.13
SMARCC1-202ENST00000425518 YDJCA8MPS7 323 aa7.97□□□□□ -1.13
SMARCC1-202ENST00000425518 H0Y3Z8 333 aa7.97□□□□□ -1.13
SMARCC1-202ENST00000425518 KIF1CO43896 1103 aaKnown RBP7.97□□□□□ -1.13
SMARCC1-202ENST00000425518 BANF1O75531 89 aa7.97□□□□□ -1.13
SMARCC1-202ENST00000425518 TCEA3O75764 348 aa7.97□□□□□ -1.13
SMARCC1-202ENST00000425518 SPDYE6P0CI01 402 aa7.97□□□□□ -1.13
SMARCC1-202ENST00000425518 PECAM1P16284 738 aaPredicted RBP7.97□□□□□ -1.13
SMARCC1-202ENST00000425518 ATP2A2P16615 1042 aaKnown RBP7.97□□□□□ -1.13
SMARCC1-202ENST00000425518 GNA15P30679 374 aa7.97□□□□□ -1.13
SMARCC1-202ENST00000425518 RPA3P35244 121 aaPredicted RBP7.97□□□□□ -1.13
SMARCC1-202ENST00000425518 LIG4P49917 911 aa7.97□□□□□ -1.13
SMARCC1-202ENST00000425518 BPIFB4P59827 614 aa7.97□□□□□ -1.13
SMARCC1-202ENST00000425518 RPL7AP62424 266 aaKnown RBP7.97□□□□□ -1.13
SMARCC1-202ENST00000425518 NFX1Q12986 1120 aaKnown RBP7.97□□□□□ -1.13
SMARCC1-202ENST00000425518 KLF1Q13351 362 aaPredicted RBP7.97□□□□□ -1.13
SMARCC1-202ENST00000425518 MAMLD1Q13495 774 aa7.97□□□□□ -1.13
SMARCC1-202ENST00000425518 SPARCL1Q14515 664 aa7.97□□□□□ -1.13
SMARCC1-202ENST00000425518 SEPT7Q16181 437 aaKnown RBP7.97□□□□□ -1.13
SMARCC1-202ENST00000425518 ARHGEF16Q5VV41 709 aa7.97□□□□□ -1.13
SMARCC1-202ENST00000425518 RNF43Q68DV7 783 aa7.97□□□□□ -1.13
SMARCC1-202ENST00000425518 SWSAP1Q6NVH7 229 aa7.97□□□□□ -1.13
SMARCC1-202ENST00000425518 NLRX1Q86UT6 975 aa7.97□□□□□ -1.13
SMARCC1-202ENST00000425518 ANKLE1Q8NAG6 615 aa7.97□□□□□ -1.13
SMARCC1-202ENST00000425518 GRAMD1AQ96CP6 724 aa7.97□□□□□ -1.13
SMARCC1-202ENST00000425518 TRIM11Q96F44 468 aa7.97□□□□□ -1.13
SMARCC1-202ENST00000425518 ZNF570Q96NI8 536 aa7.97□□□□□ -1.13
SMARCC1-202ENST00000425518 C10orf88Q9H8K7 445 aa7.97□□□□□ -1.13
SMARCC1-202ENST00000425518 KIAA1586Q9HCI6 787 aa7.97□□□□□ -1.13
SMARCC1-202ENST00000425518 TXLNGQ9NUQ3 528 aa7.97□□□□□ -1.13
SMARCC1-202ENST00000425518 LGALS13Q9UHV8 139 aa7.97□□□□□ -1.13
SMARCC1-202ENST00000425518 ADGRA3Q8IWK6 1321 aa7.97□□□□□ -1.13
SMARCC1-202ENST00000425518 A0A1W2PPM1 405 aa7.97□□□□□ -1.13
SMARCC1-202ENST00000425518 LYPLA2O95372 231 aa7.97□□□□□ -1.13
SMARCC1-202ENST00000425518 KRT1P04264 644 aa7.97□□□□□ -1.13
SMARCC1-202ENST00000425518 MYBL1P10243 752 aa7.97□□□□□ -1.13
SMARCC1-202ENST00000425518 ALDH3A1P30838 453 aa7.97□□□□□ -1.13
SMARCC1-202ENST00000425518 FKBP1AP62942 108 aaKnown RBP7.97□□□□□ -1.13
SMARCC1-202ENST00000425518 DYNLT1P63172 113 aa7.97□□□□□ -1.13
SMARCC1-202ENST00000425518 SEZ6Q53EL9 994 aa7.97□□□□□ -1.13
SMARCC1-202ENST00000425518 ZNF394Q53GI3 561 aa7.97□□□□□ -1.13
SMARCC1-202ENST00000425518 MFSD7Q6UXD7 560 aa7.97□□□□□ -1.13
SMARCC1-202ENST00000425518 ASRGL1Q7L266 308 aa7.97□□□□□ -1.13
SMARCC1-202ENST00000425518 ENOSF1Q7L5Y1 443 aa7.97□□□□□ -1.13
SMARCC1-202ENST00000425518 TRABD2AQ86V40 505 aa7.97□□□□□ -1.13
SMARCC1-202ENST00000425518 MRPL47Q9HD33 250 aaKnown RBP7.97□□□□□ -1.13
SMARCC1-202ENST00000425518 ALG13Q9NP73 1137 aaKnown RBP7.97□□□□□ -1.13
SMARCC1-202ENST00000425518 TRPC5Q9UL62 973 aaPredicted RBP7.97□□□□□ -1.13
SMARCC1-202ENST00000425518 CBX6O95503 412 aa7.96□□□□□ -1.13
SMARCC1-202ENST00000425518 ALADP13716 330 aa7.96□□□□□ -1.13
SMARCC1-202ENST00000425518 PTGER2P43116 358 aa7.96□□□□□ -1.13
SMARCC1-202ENST00000425518 PSMC4P43686 418 aa7.96□□□□□ -1.13
SMARCC1-202ENST00000425518 WNT7BP56706 349 aa7.96□□□□□ -1.13
SMARCC1-202ENST00000425518 PDIA2Q13087 525 aaKnown RBP7.96□□□□□ -1.13
SMARCC1-202ENST00000425518 TAF11Q15544 211 aa7.96□□□□□ -1.13
SMARCC1-202ENST00000425518 DCUN1D2Q6PH85 259 aa7.96□□□□□ -1.13
SMARCC1-202ENST00000425518 BZW1Q7L1Q6 419 aaKnown RBP7.96□□□□□ -1.13
SMARCC1-202ENST00000425518 ZCCHC9Q8N567 271 aaKnown RBP7.96□□□□□ -1.13
SMARCC1-202ENST00000425518 ZBTB45Q96K62 511 aaPredicted RBP7.96□□□□□ -1.13
SMARCC1-202ENST00000425518 RAB3IPQ96QF0 476 aaPredicted RBP7.96□□□□□ -1.13
SMARCC1-202ENST00000425518 KLF6Q99612 283 aaPredicted RBP7.96□□□□□ -1.13
SMARCC1-202ENST00000425518 LBHD1Q9BQE6 289 aaPredicted RBP7.96□□□□□ -1.13
SMARCC1-202ENST00000425518 ANKEF1Q9NU02 776 aa7.96□□□□□ -1.13
SMARCC1-202ENST00000425518 SEPT9Q9UHD8 586 aaPredicted RBP7.96□□□□□ -1.13
SMARCC1-202ENST00000425518 DCTN4Q9UJW0 460 aa7.96□□□□□ -1.13
SMARCC1-202ENST00000425518 CHKBQ9Y259 395 aa7.96□□□□□ -1.13
SMARCC1-202ENST00000425518 TELO2Q9Y4R8 837 aa7.96□□□□□ -1.13
SMARCC1-202ENST00000425518 FOCADQ5VW36 1801 aa7.96□□□□□ -1.13
SMARCC1-202ENST00000425518 UMODL1Q5DID0 1318 aa7.96□□□□□ -1.13
SMARCC1-202ENST00000425518 GOLGA8RI6L899 631 aa7.96□□□□□ -1.14
SMARCC1-202ENST00000425518 SGK1O00141 431 aa7.96□□□□□ -1.14
SMARCC1-202ENST00000425518 ASMTLO95671 621 aa7.96□□□□□ -1.14
SMARCC1-202ENST00000425518 GTF2H1P32780 548 aa7.96□□□□□ -1.14
SMARCC1-202ENST00000425518 JAK3P52333 1124 aa7.96□□□□□ -1.14
SMARCC1-202ENST00000425518 POLGP54098 1239 aaPredicted RBP7.96□□□□□ -1.14
SMARCC1-202ENST00000425518 NLRP11P59045 1033 aaKnown RBP7.96□□□□□ -1.14
SMARCC1-202ENST00000425518 PGM5Q15124 567 aa7.96□□□□□ -1.14
SMARCC1-202ENST00000425518 SLC1A5Q15758 541 aa7.96□□□□□ -1.14
SMARCC1-202ENST00000425518 ANKRD20A2Q5SQ80 823 aa7.96□□□□□ -1.14
SMARCC1-202ENST00000425518 ANKRD20A1Q5TYW2 823 aa7.96□□□□□ -1.14
SMARCC1-202ENST00000425518 ANKRD20A3Q5VUR7 823 aa7.96□□□□□ -1.14
SMARCC1-202ENST00000425518 EP400NLQ6ZTU2 488 aa7.96□□□□□ -1.14
SMARCC1-202ENST00000425518 MON1BQ7L1V2 547 aa7.96□□□□□ -1.14
SMARCC1-202ENST00000425518 UTP4Q969X6 686 aaKnown RBP7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms