RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 POMCP01189 267 aa11.07□□□□□ -0.64
MDC1-205ENST00000425072 FGBP02675 491 aa11.07□□□□□ -0.64
MDC1-205ENST00000425072 AMHP03971 560 aa11.07□□□□□ -0.64
MDC1-205ENST00000425072 CSF2RAP15509 400 aa11.07□□□□□ -0.64
MDC1-205ENST00000425072 IBSPP21815 317 aaPredicted RBP11.07□□□□□ -0.64
MDC1-205ENST00000425072 FECHP22830 423 aa11.07□□□□□ -0.64
MDC1-205ENST00000425072 MLH1P40692 756 aa11.07□□□□□ -0.64
MDC1-205ENST00000425072 USP8P40818 1118 aa11.07□□□□□ -0.64
MDC1-205ENST00000425072 TAF6P49848 677 aa11.07□□□□□ -0.64
MDC1-205ENST00000425072 PTK2Q05397 1052 aa11.07□□□□□ -0.64
MDC1-205ENST00000425072 RNASELQ05823 741 aaKnown RBP11.07□□□□□ -0.64
MDC1-205ENST00000425072 KLHL30Q0D2K2 578 aa11.07□□□□□ -0.64
MDC1-205ENST00000425072 SV2CQ496J9 727 aa11.07□□□□□ -0.64
MDC1-205ENST00000425072 GLRA4Q5JXX5 417 aa11.07□□□□□ -0.64
MDC1-205ENST00000425072 GJB7Q6PEY0 223 aa11.07□□□□□ -0.64
MDC1-205ENST00000425072 ARHGEF19Q8IW93 802 aa11.07□□□□□ -0.64
MDC1-205ENST00000425072 FAM71AQ8IYT1 594 aa11.07□□□□□ -0.64
MDC1-205ENST00000425072 TXLNBQ8N3L3 684 aa11.07□□□□□ -0.64
MDC1-205ENST00000425072 TET1Q8NFU7 2136 aa11.07□□□□□ -0.64
MDC1-205ENST00000425072 CXorf38Q8TB03 319 aa11.07□□□□□ -0.64
MDC1-205ENST00000425072 SHC3Q92529 594 aa11.07□□□□□ -0.64
MDC1-205ENST00000425072 C18orf25Q96B23 403 aaPredicted RBP11.07□□□□□ -0.64
MDC1-205ENST00000425072 MRPL9Q9BYD2 267 aaKnown RBP11.07□□□□□ -0.64
MDC1-205ENST00000425072 NIF3L1Q9GZT8 377 aa11.07□□□□□ -0.64
MDC1-205ENST00000425072 XYLT2Q9H1B5 865 aa11.07□□□□□ -0.64
MDC1-205ENST00000425072 DEF6Q9H4E7 631 aa11.07□□□□□ -0.64
MDC1-205ENST00000425072 LUC7LQ9NQ29 371 aaKnown RBP11.07□□□□□ -0.64
MDC1-205ENST00000425072 GDAP2Q9NXN4 497 aa11.07□□□□□ -0.64
MDC1-205ENST00000425072 EPN1Q9Y6I3 576 aaPredicted RBP11.07□□□□□ -0.64
MDC1-205ENST00000425072 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.06□□□□□ -0.64
MDC1-205ENST00000425072 MEIS3P2A8K0S8 358 aa11.06□□□□□ -0.64
MDC1-205ENST00000425072 F8VZ95 297 aa11.06□□□□□ -0.64
MDC1-205ENST00000425072 TRAPPC3O43617 180 aa11.06□□□□□ -0.64
MDC1-205ENST00000425072 AKR1B10O60218 316 aa11.06□□□□□ -0.64
MDC1-205ENST00000425072 LRRN2O75325 713 aa11.06□□□□□ -0.64
MDC1-205ENST00000425072 KRT5P13647 590 aa11.06□□□□□ -0.64
MDC1-205ENST00000425072 TNFAIP3P21580 790 aa11.06□□□□□ -0.64
MDC1-205ENST00000425072 PRKCIP41743 596 aa11.06□□□□□ -0.64
MDC1-205ENST00000425072 KCNJ6P48051 423 aa11.06□□□□□ -0.64
MDC1-205ENST00000425072 SCNN1GP51170 649 aa11.06□□□□□ -0.64
MDC1-205ENST00000425072 LILRA4P59901 499 aa11.06□□□□□ -0.64
MDC1-205ENST00000425072 KRT83P78385 493 aa11.06□□□□□ -0.64
MDC1-205ENST00000425072 APBA1Q02410 837 aa11.06□□□□□ -0.64
MDC1-205ENST00000425072 ARID5AQ03989 594 aa11.06□□□□□ -0.64
MDC1-205ENST00000425072 GOLGA8FQ08AF8 430 aa11.06□□□□□ -0.64
MDC1-205ENST00000425072 GOLGA8DPQ0D2H9 430 aa11.06□□□□□ -0.64
MDC1-205ENST00000425072 SPA17Q15506 151 aa11.06□□□□□ -0.64
MDC1-205ENST00000425072 C10orf76Q5T2E6 689 aa11.06□□□□□ -0.64
MDC1-205ENST00000425072 WDR59Q6PJI9 974 aa11.06□□□□□ -0.64
MDC1-205ENST00000425072 LINC01599Q8WXQ3 324 aa11.06□□□□□ -0.64
MDC1-205ENST00000425072 DPF3Q92784 378 aa11.06□□□□□ -0.64
MDC1-205ENST00000425072 TOP1MTQ969P6 601 aa11.06□□□□□ -0.64
MDC1-205ENST00000425072 KREMEN1Q96MU8 473 aa11.06□□□□□ -0.64
MDC1-205ENST00000425072 MMS19Q96T76 1030 aa11.06□□□□□ -0.64
MDC1-205ENST00000425072 LBHD1Q9BQE6 289 aaPredicted RBP11.06□□□□□ -0.64
MDC1-205ENST00000425072 COLEC11Q9BWP8 271 aa11.06□□□□□ -0.64
MDC1-205ENST00000425072 NHEJ1Q9H9Q4 299 aaPredicted RBP11.06□□□□□ -0.64
MDC1-205ENST00000425072 APOBEC3GQ9HC16 384 aaKnown RBP11.06□□□□□ -0.64
MDC1-205ENST00000425072 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.06□□□□□ -0.64
MDC1-205ENST00000425072 TUBGCP4Q9UGJ1 667 aa11.06□□□□□ -0.64
MDC1-205ENST00000425072 CNTN6Q9UQ52 1028 aa11.06□□□□□ -0.64
MDC1-205ENST00000425072 INPP5FQ9Y2H2 1132 aa11.06□□□□□ -0.64
MDC1-205ENST00000425072 PCDHB4Q9Y5E5 795 aa11.06□□□□□ -0.64
MDC1-205ENST00000425072 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.06□□□□□ -0.64
MDC1-205ENST00000425072 PDCD11Q14690 1871 aaKnown RBP11.06□□□□□ -0.64
MDC1-205ENST00000425072 RALGAPA2Q2PPJ7 1873 aa11.06□□□□□ -0.64
MDC1-205ENST00000425072 SCN5AQ14524 2016 aa11.06□□□□□ -0.64
MDC1-205ENST00000425072 TDRD15B5MCY1 1934 aaKnown RBP11.05□□□□□ -0.64
MDC1-205ENST00000425072 ZSCAN12O43309 604 aa11.05□□□□□ -0.64
MDC1-205ENST00000425072 HUS1O60921 280 aa11.05□□□□□ -0.64
MDC1-205ENST00000425072 MSNP26038 577 aaKnown RBP11.05□□□□□ -0.64
MDC1-205ENST00000425072 CCZ1BP86790 482 aa11.05□□□□□ -0.64
MDC1-205ENST00000425072 CCZ1P86791 482 aaPredicted RBP11.05□□□□□ -0.64
MDC1-205ENST00000425072 FPGSQ05932 587 aa11.05□□□□□ -0.64
MDC1-205ENST00000425072 UPP1Q16831 310 aa11.05□□□□□ -0.64
MDC1-205ENST00000425072 SPOPLQ6IQ16 392 aa11.05□□□□□ -0.64
MDC1-205ENST00000425072 ZNF677Q86XU0 584 aa11.05□□□□□ -0.64
MDC1-205ENST00000425072 CRIPAKQ8N1N5 446 aa11.05□□□□□ -0.64
MDC1-205ENST00000425072 TOP6BLQ8N6T0 577 aa11.05□□□□□ -0.64
MDC1-205ENST00000425072 APPL2Q8NEU8 664 aa11.05□□□□□ -0.64
MDC1-205ENST00000425072 CHP1Q99653 195 aa11.05□□□□□ -0.64
MDC1-205ENST00000425072 BCO2Q9BYV7 579 aa11.05□□□□□ -0.64
MDC1-205ENST00000425072 CXCL16Q9H2A7 254 aa11.05□□□□□ -0.64
MDC1-205ENST00000425072 HAUS4Q9H6D7 363 aa11.05□□□□□ -0.64
MDC1-205ENST00000425072 CISHQ9NSE2 258 aa11.05□□□□□ -0.64
MDC1-205ENST00000425072 ZKSCAN5Q9Y2L8 839 aa11.05□□□□□ -0.64
MDC1-205ENST00000425072 SNX9Q9Y5X1 595 aa11.05□□□□□ -0.64
MDC1-205ENST00000425072 NR2E3Q9Y5X4 410 aa11.05□□□□□ -0.64
MDC1-205ENST00000425072 EIF3CLB5ME19 914 aaKnown RBP11.04□□□□□ -0.64
MDC1-205ENST00000425072 PODXLO00592 558 aa11.04□□□□□ -0.64
MDC1-205ENST00000425072 CYB561D2O14569 222 aa11.04□□□□□ -0.64
MDC1-205ENST00000425072 CYP26A1O43174 497 aa11.04□□□□□ -0.64
MDC1-205ENST00000425072 TACC1O75410 805 aa11.04□□□□□ -0.64
MDC1-205ENST00000425072 B3GAT3O94766 335 aa11.04□□□□□ -0.64
MDC1-205ENST00000425072 UPP2O95045 317 aa11.04□□□□□ -0.64
MDC1-205ENST00000425072 KIF4AO95239 1232 aa11.04□□□□□ -0.64
MDC1-205ENST00000425072 PAEPP09466 180 aa11.04□□□□□ -0.64
MDC1-205ENST00000425072 WEE2P0C1S8 567 aa11.04□□□□□ -0.64
MDC1-205ENST00000425072 ACO1P21399 889 aaKnown RBP11.04□□□□□ -0.64
MDC1-205ENST00000425072 ITGB8P26012 769 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms