RNA–Protein interactions for RNA: ENST00000423141.1

NPC1L1-203, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-203ENST00000423141 LXNQ9BS40 222 aa17.65■□□□□ 0.42
NPC1L1-203ENST00000423141 TRIM4Q9C037 500 aa17.65■□□□□ 0.42
NPC1L1-203ENST00000423141 TOPORSQ9NS56 1045 aaPredicted RBP17.65■□□□□ 0.42
NPC1L1-203ENST00000423141 PLSCR1O15162 318 aa17.64■□□□□ 0.41
NPC1L1-203ENST00000423141 GSC2O15499 205 aa17.64■□□□□ 0.41
NPC1L1-203ENST00000423141 GAS7O60861 476 aa17.64■□□□□ 0.41
NPC1L1-203ENST00000423141 RXRBP28702 533 aa17.64■□□□□ 0.41
NPC1L1-203ENST00000423141 PIK3CAP42336 1068 aa17.64■□□□□ 0.41
NPC1L1-203ENST00000423141 PRELPP51888 382 aa17.64■□□□□ 0.41
NPC1L1-203ENST00000423141 CACNB3P54284 484 aa17.64■□□□□ 0.41
NPC1L1-203ENST00000423141 CACNA2D1P54289 1103 aa17.64■□□□□ 0.41
NPC1L1-203ENST00000423141 MFAP3P55082 362 aa17.64■□□□□ 0.41
NPC1L1-203ENST00000423141 TAS2R40P59535 323 aa17.64■□□□□ 0.41
NPC1L1-203ENST00000423141 CENPCQ03188 943 aa17.64■□□□□ 0.41
NPC1L1-203ENST00000423141 NR1H3Q13133 447 aa17.64■□□□□ 0.41
NPC1L1-203ENST00000423141 EFTUD2Q15029 972 aaKnown RBP eCLIP17.64■□□□□ 0.415e-7■■■■■ 28.5
NPC1L1-203ENST00000423141 CLEC16AQ2KHT3 1053 aa17.64■□□□□ 0.41
NPC1L1-203ENST00000423141 RFX8Q6ZV50 586 aa17.64■□□□□ 0.41
NPC1L1-203ENST00000423141 ZFAND2BQ8WV99 257 aa17.64■□□□□ 0.41
NPC1L1-203ENST00000423141 MAIP1Q8WWC4 291 aa17.64■□□□□ 0.41
NPC1L1-203ENST00000423141 VTI1AQ96AJ9 217 aa17.64■□□□□ 0.41
NPC1L1-203ENST00000423141 BTBD10Q9BSF8 475 aa17.64■□□□□ 0.41
NPC1L1-203ENST00000423141 UNC45AQ9H3U1 944 aa17.64■□□□□ 0.41
NPC1L1-203ENST00000423141 FBXO6Q9NRD1 293 aaPredicted RBP17.64■□□□□ 0.41
NPC1L1-203ENST00000423141 SUGT1Q9Y2Z0 365 aa17.64■□□□□ 0.41
NPC1L1-203ENST00000423141 SRCAPQ6ZRS2 3230 aa17.64■□□□□ 0.41
NPC1L1-203ENST00000423141 GREB1LQ9C091 1923 aaPredicted RBP17.64■□□□□ 0.41
NPC1L1-203ENST00000423141 ARHGEF35A5YM69 484 aa17.64■□□□□ 0.41
NPC1L1-203ENST00000423141 PIK3CDO00329 1044 aa17.64■□□□□ 0.41
NPC1L1-203ENST00000423141 RPS6KA4O75676 772 aa17.64■□□□□ 0.41
NPC1L1-203ENST00000423141 BRD2P25440 801 aaKnown RBP17.64■□□□□ 0.41
NPC1L1-203ENST00000423141 ERFP50548 548 aa17.64■□□□□ 0.41
NPC1L1-203ENST00000423141 OCRLQ01968 901 aa17.64■□□□□ 0.41
NPC1L1-203ENST00000423141 TRAF1Q13077 416 aa17.64■□□□□ 0.41
NPC1L1-203ENST00000423141 PPP2R5CQ13362 524 aa17.64■□□□□ 0.41
NPC1L1-203ENST00000423141 CCNG2Q16589 344 aa17.64■□□□□ 0.41
NPC1L1-203ENST00000423141 CBWD2Q8IUF1 395 aa17.64■□□□□ 0.41
NPC1L1-203ENST00000423141 APLFQ8IW19 511 aaPredicted RBP17.64■□□□□ 0.41
NPC1L1-203ENST00000423141 XXYLT1Q8NBI6 393 aa17.64■□□□□ 0.41
NPC1L1-203ENST00000423141 RPGRQ92834 1020 aaKnown RBP17.64■□□□□ 0.41
NPC1L1-203ENST00000423141 PTCD3Q96EY7 689 aaKnown RBP17.64■□□□□ 0.41
NPC1L1-203ENST00000423141 DDX50Q9BQ39 737 aaKnown RBP17.64■□□□□ 0.41
NPC1L1-203ENST00000423141 CDCA7Q9BWT1 371 aaPredicted RBP17.64■□□□□ 0.41
NPC1L1-203ENST00000423141 SAR1AQ9NR31 198 aa17.64■□□□□ 0.41
NPC1L1-203ENST00000423141 RPL26L1Q9UNX3 145 aaKnown RBP17.64■□□□□ 0.41
NPC1L1-203ENST00000423141 WASF2Q9Y6W5 498 aa17.64■□□□□ 0.41
NPC1L1-203ENST00000423141 C2orf71A6NGG8 1288 aa17.63■□□□□ 0.41
NPC1L1-203ENST00000423141 SKIP12755 728 aa17.63■□□□□ 0.41
NPC1L1-203ENST00000423141 ATP2B4P23634 1241 aa17.63■□□□□ 0.41
NPC1L1-203ENST00000423141 FYB2Q5VWT5 728 aa17.63■□□□□ 0.41
NPC1L1-203ENST00000423141 RINLQ6ZS11 566 aa17.63■□□□□ 0.41
NPC1L1-203ENST00000423141 ZBED8Q8IZ13 594 aa17.63■□□□□ 0.41
NPC1L1-203ENST00000423141 FGD4Q96M96 766 aa17.63■□□□□ 0.41
NPC1L1-203ENST00000423141 PCMTD2Q9NV79 361 aa17.63■□□□□ 0.41
NPC1L1-203ENST00000423141 HEY2Q9UBP5 337 aa17.63■□□□□ 0.41
NPC1L1-203ENST00000423141 DDX39AO00148 427 aaKnown RBP17.63■□□□□ 0.41
NPC1L1-203ENST00000423141 RIMBP2O15034 1052 aa17.63■□□□□ 0.41
NPC1L1-203ENST00000423141 CCDC22O60826 627 aa17.63■□□□□ 0.41
NPC1L1-203ENST00000423141 RNF8O76064 485 aa17.63■□□□□ 0.41
NPC1L1-203ENST00000423141 PSMG1O95456 288 aa17.63■□□□□ 0.41
NPC1L1-203ENST00000423141 KRT5P13647 590 aa17.63■□□□□ 0.41
NPC1L1-203ENST00000423141 SLC18A1P54219 525 aa17.63■□□□□ 0.41
NPC1L1-203ENST00000423141 NOP14P78316 857 aaKnown RBP17.63■□□□□ 0.41
NPC1L1-203ENST00000423141 SLC34A1Q06495 639 aa17.63■□□□□ 0.41
NPC1L1-203ENST00000423141 SLC5A9Q2M3M2 681 aa17.63■□□□□ 0.41
NPC1L1-203ENST00000423141 CDC42EP5Q6NZY7 148 aa17.63■□□□□ 0.41
NPC1L1-203ENST00000423141 TDRPQ86YL5 185 aa17.63■□□□□ 0.41
NPC1L1-203ENST00000423141 SCYL3Q8IZE3 742 aa17.63■□□□□ 0.41
NPC1L1-203ENST00000423141 BBOF1Q8ND07 529 aa17.63■□□□□ 0.41
NPC1L1-203ENST00000423141 PTPRN2Q92932 1015 aa17.63■□□□□ 0.41
NPC1L1-203ENST00000423141 KLF6Q99612 283 aaPredicted RBP17.63■□□□□ 0.41
NPC1L1-203ENST00000423141 OSBPL8Q9BZF1 889 aa17.63■□□□□ 0.41
NPC1L1-203ENST00000423141 GOLGA8RI6L899 631 aa17.62■□□□□ 0.41
NPC1L1-203ENST00000423141 TJP3O95049 919 aa17.62■□□□□ 0.41
NPC1L1-203ENST00000423141 CFBP00751 764 aa17.62■□□□□ 0.41
NPC1L1-203ENST00000423141 HLA-DOAP06340 250 aa17.62■□□□□ 0.41
NPC1L1-203ENST00000423141 PADI6Q6TGC4 694 aa17.62■□□□□ 0.41
NPC1L1-203ENST00000423141 MCOLN2Q8IZK6 566 aa17.62■□□□□ 0.41
NPC1L1-203ENST00000423141 ZNF276Q8N554 614 aa17.62■□□□□ 0.41
NPC1L1-203ENST00000423141 TAS1R2Q8TE23 839 aa17.62■□□□□ 0.41
NPC1L1-203ENST00000423141 KRT82Q9NSB4 513 aa17.62■□□□□ 0.41
NPC1L1-203ENST00000423141 ANKFY1Q9P2R3 1169 aa17.62■□□□□ 0.41
NPC1L1-203ENST00000423141 UMODL1Q5DID0 1318 aa17.62■□□□□ 0.41
NPC1L1-203ENST00000423141 COL16A1Q07092 1604 aaPredicted RBP17.62■□□□□ 0.41
NPC1L1-203ENST00000423141 PI4K2BG5E9Z4 385 aa17.62■□□□□ 0.41
NPC1L1-203ENST00000423141 GYG2O15488 501 aa17.62■□□□□ 0.41
NPC1L1-203ENST00000423141 HAUS5O94927 633 aa17.62■□□□□ 0.41
NPC1L1-203ENST00000423141 UBTFL6P0CB48 400 aaPredicted RBP17.62■□□□□ 0.41
NPC1L1-203ENST00000423141 ARP10275 920 aa17.62■□□□□ 0.41
NPC1L1-203ENST00000423141 KRT10P13645 584 aa17.62■□□□□ 0.41
NPC1L1-203ENST00000423141 SERPINB3P29508 390 aa17.62■□□□□ 0.41
NPC1L1-203ENST00000423141 TCP10Q12799 353 aa17.62■□□□□ 0.41
NPC1L1-203ENST00000423141 MYBPC2Q14324 1141 aa17.62■□□□□ 0.41
NPC1L1-203ENST00000423141 SPDYAQ5MJ70 313 aa17.62■□□□□ 0.41
NPC1L1-203ENST00000423141 KAZNQ674X7 775 aa17.62■□□□□ 0.41
NPC1L1-203ENST00000423141 TRMT1LQ7Z2T5 733 aaKnown RBP17.62■□□□□ 0.41
NPC1L1-203ENST00000423141 TTC7BQ86TV6 843 aa17.62■□□□□ 0.41
NPC1L1-203ENST00000423141 ANKMY2Q8IV38 441 aa17.62■□□□□ 0.41
NPC1L1-203ENST00000423141 MKL1Q969V6 931 aa17.62■□□□□ 0.41
NPC1L1-203ENST00000423141 PI4K2AQ9BTU6 479 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms