RNA–Protein interactions for RNA: ENST00000422933.5

HDLBP-209, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-209ENST00000422933 ANO9A1A5B4 782 aa10.72□□□□□ -0.69
HDLBP-209ENST00000422933 GTPBP10A4D1E9 387 aaKnown RBP10.72□□□□□ -0.69
HDLBP-209ENST00000422933 C5orf67F2Z3F1 127 aa10.72□□□□□ -0.69
HDLBP-209ENST00000422933 PIRO00625 290 aa10.72□□□□□ -0.69
HDLBP-209ENST00000422933 SYN3O14994 580 aa10.72□□□□□ -0.69
HDLBP-209ENST00000422933 HLA-DRAP01903 254 aa10.72□□□□□ -0.69
HDLBP-209ENST00000422933 URODP06132 367 aa10.72□□□□□ -0.69
HDLBP-209ENST00000422933 GUCY2FP51841 1108 aa10.72□□□□□ -0.69
HDLBP-209ENST00000422933 COPB1P53618 953 aaKnown RBP10.72□□□□□ -0.69
HDLBP-209ENST00000422933 LILRA4P59901 499 aa10.72□□□□□ -0.69
HDLBP-209ENST00000422933 MCCD1P59942 119 aaPredicted RBP10.72□□□□□ -0.69
HDLBP-209ENST00000422933 UBXN1Q04323 297 aa10.72□□□□□ -0.69
HDLBP-209ENST00000422933 SOX4Q06945 474 aaPredicted RBP10.72□□□□□ -0.69
HDLBP-209ENST00000422933 PPP3CAQ08209 521 aa10.72□□□□□ -0.69
HDLBP-209ENST00000422933 NCAPHQ15003 741 aa10.72□□□□□ -0.69
HDLBP-209ENST00000422933 KRT31Q15323 416 aa10.72□□□□□ -0.69
HDLBP-209ENST00000422933 NAB2Q15742 525 aa10.72□□□□□ -0.69
HDLBP-209ENST00000422933 EXOC3L4Q17RC7 722 aa10.72□□□□□ -0.69
HDLBP-209ENST00000422933 WDR72Q3MJ13 1102 aa10.72□□□□□ -0.69
HDLBP-209ENST00000422933 TDRD10Q5VZ19 366 aaKnown RBP10.72□□□□□ -0.69
HDLBP-209ENST00000422933 FUT10Q6P4F1 479 aa10.72□□□□□ -0.69
HDLBP-209ENST00000422933 DPH6Q7L8W6 267 aa10.72□□□□□ -0.69
HDLBP-209ENST00000422933 TMC7Q7Z402 723 aa10.72□□□□□ -0.69
HDLBP-209ENST00000422933 DDX53Q86TM3 631 aaKnown RBP10.72□□□□□ -0.69
HDLBP-209ENST00000422933 CEP57Q86XR8 500 aa10.72□□□□□ -0.69
HDLBP-209ENST00000422933 TMEM86AQ8N2M4 240 aa10.72□□□□□ -0.69
HDLBP-209ENST00000422933 KLHL23Q8NBE8 558 aa10.72□□□□□ -0.69
HDLBP-209ENST00000422933 RNF214Q8ND24 703 aa10.72□□□□□ -0.69
HDLBP-209ENST00000422933 ZNF516Q92618 1163 aa10.72□□□□□ -0.69
HDLBP-209ENST00000422933 FAXDC2Q96IV6 333 aa10.72□□□□□ -0.69
HDLBP-209ENST00000422933 NT5C1BQ96P26 610 aa10.72□□□□□ -0.69
HDLBP-209ENST00000422933 MED15Q96RN5 788 aa10.72□□□□□ -0.69
HDLBP-209ENST00000422933 C17orf80Q9BSJ5 609 aa10.72□□□□□ -0.69
HDLBP-209ENST00000422933 OXCT2Q9BYC2 517 aaPredicted RBP10.72□□□□□ -0.69
HDLBP-209ENST00000422933 TTYH1Q9H313 450 aaPredicted RBP10.72□□□□□ -0.69
HDLBP-209ENST00000422933 ZNF576Q9H609 170 aa10.72□□□□□ -0.69
HDLBP-209ENST00000422933 ENTPD7Q9NQZ7 604 aa10.72□□□□□ -0.69
HDLBP-209ENST00000422933 TAB2Q9NYJ8 693 aa10.72□□□□□ -0.69
HDLBP-209ENST00000422933 KIAA1671Q9BY89 1806 aa10.72□□□□□ -0.69
HDLBP-209ENST00000422933 TTC28Q96AY4 2481 aa10.72□□□□□ -0.69
HDLBP-209ENST00000422933 H3BNC9 293 aa10.71□□□□□ -0.69
HDLBP-209ENST00000422933 CYB561D2O14569 222 aa10.71□□□□□ -0.69
HDLBP-209ENST00000422933 MEFVO15553 781 aaPredicted RBP10.71□□□□□ -0.69
HDLBP-209ENST00000422933 KIF4AO95239 1232 aa10.71□□□□□ -0.69
HDLBP-209ENST00000422933 STAU1O95793 577 aaKnown RBP10.71□□□□□ -0.69
HDLBP-209ENST00000422933 SOD2P04179 222 aa10.71□□□□□ -0.69
HDLBP-209ENST00000422933 FAM163BP0C2L3 166 aa10.71□□□□□ -0.69
HDLBP-209ENST00000422933 ZNF18P17022 549 aa10.71□□□□□ -0.69
HDLBP-209ENST00000422933 TBXAS1P24557 533 aaPredicted RBP10.71□□□□□ -0.69
HDLBP-209ENST00000422933 UBASH3AP57075 661 aa10.71□□□□□ -0.69
HDLBP-209ENST00000422933 MYL6P60660 151 aa10.71□□□□□ -0.69
HDLBP-209ENST00000422933 MYO9BQ13459 2157 aa10.71□□□□□ -0.69
HDLBP-209ENST00000422933 FAM171A1Q5VUB5 890 aa10.71□□□□□ -0.69
HDLBP-209ENST00000422933 ELMSAN1Q6PJG2 1045 aa10.71□□□□□ -0.69
HDLBP-209ENST00000422933 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.71□□□□□ -0.69
HDLBP-209ENST00000422933 ANKS3Q6ZW76 656 aa10.71□□□□□ -0.69
HDLBP-209ENST00000422933 IRF2BP1Q8IU81 584 aa10.71□□□□□ -0.69
HDLBP-209ENST00000422933 EHBP1Q8NDI1 1231 aa10.71□□□□□ -0.69
HDLBP-209ENST00000422933 SPATA18Q8TC71 538 aa10.71□□□□□ -0.69
HDLBP-209ENST00000422933 PLEKHO2Q8TD55 490 aa10.71□□□□□ -0.69
HDLBP-209ENST00000422933 HASPINQ8TF76 798 aa10.71□□□□□ -0.69
HDLBP-209ENST00000422933 RABGGTAQ92696 567 aa10.71□□□□□ -0.69
HDLBP-209ENST00000422933 SUSD3Q96L08 255 aa10.71□□□□□ -0.69
HDLBP-209ENST00000422933 SENP8Q96LD8 212 aa10.71□□□□□ -0.69
HDLBP-209ENST00000422933 CDX2Q99626 313 aaPredicted RBP10.71□□□□□ -0.69
HDLBP-209ENST00000422933 TTPALQ9BTX7 342 aa10.71□□□□□ -0.69
HDLBP-209ENST00000422933 CXCL16Q9H2A7 254 aa10.71□□□□□ -0.69
HDLBP-209ENST00000422933 SNX25Q9H3E2 840 aa10.71□□□□□ -0.69
HDLBP-209ENST00000422933 FAM124BQ9H5Z6 455 aaPredicted RBP10.71□□□□□ -0.69
HDLBP-209ENST00000422933 NGRNQ9NPE2 291 aaKnown RBP10.71□□□□□ -0.69
HDLBP-209ENST00000422933 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.71□□□□□ -0.69
HDLBP-209ENST00000422933 MRPL17Q9NRX2 175 aaKnown RBP10.71□□□□□ -0.69
HDLBP-209ENST00000422933 GCNT4Q9P109 453 aa10.71□□□□□ -0.69
HDLBP-209ENST00000422933 NXF1Q9UBU9 619 aaKnown RBP10.71□□□□□ -0.69
HDLBP-209ENST00000422933 PCDHB8Q9UN66 801 aa10.71□□□□□ -0.69
HDLBP-209ENST00000422933 SNX9Q9Y5X1 595 aa10.71□□□□□ -0.69
HDLBP-209ENST00000422933 MUC3AQ02505 3323 aa10.7□□□□□ -0.7
HDLBP-209ENST00000422933 PTPRJQ12913 1337 aa10.7□□□□□ -0.7
HDLBP-209ENST00000422933 FSD2A1L4K1 749 aa10.7□□□□□ -0.7
HDLBP-209ENST00000422933 LRRC10BA6NIK2 292 aa10.7□□□□□ -0.7
HDLBP-209ENST00000422933 CST3P01034 146 aaPredicted RBP10.7□□□□□ -0.7
HDLBP-209ENST00000422933 TYMPP19971 482 aa10.7□□□□□ -0.7
HDLBP-209ENST00000422933 PBX3P40426 434 aa10.7□□□□□ -0.7
HDLBP-209ENST00000422933 LHX1P48742 406 aa10.7□□□□□ -0.7
HDLBP-209ENST00000422933 GLUD2P49448 558 aa10.7□□□□□ -0.7
HDLBP-209ENST00000422933 WNT7BP56706 349 aa10.7□□□□□ -0.7
HDLBP-209ENST00000422933 NOP14P78316 857 aaKnown RBP10.7□□□□□ -0.7
HDLBP-209ENST00000422933 FANCCQ00597 558 aa10.7□□□□□ -0.7
HDLBP-209ENST00000422933 YWHAHQ04917 246 aaPredicted RBP10.7□□□□□ -0.7
HDLBP-209ENST00000422933 SMC1AQ14683 1233 aaKnown RBP10.7□□□□□ -0.7
HDLBP-209ENST00000422933 UVSSAQ2YD98 709 aa10.7□□□□□ -0.7
HDLBP-209ENST00000422933 CBWD6Q4V339 395 aa10.7□□□□□ -0.7
HDLBP-209ENST00000422933 CBWD3Q5JTY5 395 aa10.7□□□□□ -0.7
HDLBP-209ENST00000422933 CBWD5Q5RIA9 395 aa10.7□□□□□ -0.7
HDLBP-209ENST00000422933 C15orf39Q6ZRI6 1047 aa10.7□□□□□ -0.7
HDLBP-209ENST00000422933 ENOSF1Q7L5Y1 443 aa10.7□□□□□ -0.7
HDLBP-209ENST00000422933 GPR65Q8IYL9 337 aa10.7□□□□□ -0.7
HDLBP-209ENST00000422933 VPS52Q8N1B4 723 aa10.7□□□□□ -0.7
HDLBP-209ENST00000422933 TOP6BLQ8N6T0 577 aa10.7□□□□□ -0.7
HDLBP-209ENST00000422933 TAS1R2Q8TE23 839 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms