RNA–Protein interactions for RNA: ENST00000422266.1

MDC1-204, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-204ENST00000422266 WDR27A2RRH5 827 aa9.36□□□□□ -0.91
MDC1-204ENST00000422266 ANHXE9PGG2 379 aa9.36□□□□□ -0.91
MDC1-204ENST00000422266 I3L4J1 428 aa9.36□□□□□ -0.91
MDC1-204ENST00000422266 CCL16O15467 120 aa9.36□□□□□ -0.91
MDC1-204ENST00000422266 MYL1P05976 194 aa9.36□□□□□ -0.91
MDC1-204ENST00000422266 AVPR2P30518 371 aa9.36□□□□□ -0.91
MDC1-204ENST00000422266 TNFSF9P41273 254 aa9.36□□□□□ -0.91
MDC1-204ENST00000422266 ACOT2P49753 483 aa9.36□□□□□ -0.91
MDC1-204ENST00000422266 TAF6P49848 677 aa9.36□□□□□ -0.91
MDC1-204ENST00000422266 ARPP19P56211 112 aa9.36□□□□□ -0.91
MDC1-204ENST00000422266 LILRA4P59901 499 aa9.36□□□□□ -0.91
MDC1-204ENST00000422266 PFKPQ01813 784 aa9.36□□□□□ -0.91
MDC1-204ENST00000422266 SV2CQ496J9 727 aa9.36□□□□□ -0.91
MDC1-204ENST00000422266 C9orf57Q5W0N0 161 aa9.36□□□□□ -0.91
MDC1-204ENST00000422266 ASTLQ6HA08 431 aaPredicted RBP9.36□□□□□ -0.91
MDC1-204ENST00000422266 OVOS1Q6IE37 1185 aa9.36□□□□□ -0.91
MDC1-204ENST00000422266 JADE1Q6IE81 842 aa9.36□□□□□ -0.91
MDC1-204ENST00000422266 SLC39A4Q6P5W5 647 aa9.36□□□□□ -0.91
MDC1-204ENST00000422266 SPATA18Q8TC71 538 aa9.36□□□□□ -0.91
MDC1-204ENST00000422266 C2orf15Q8WU43 125 aaKnown RBP9.36□□□□□ -0.91
MDC1-204ENST00000422266 MYADMQ96S97 322 aa9.36□□□□□ -0.91
MDC1-204ENST00000422266 PANK2Q9BZ23 570 aa9.36□□□□□ -0.91
MDC1-204ENST00000422266 TRIM9Q9C026 710 aa9.36□□□□□ -0.91
MDC1-204ENST00000422266 HAPLN2Q9GZV7 340 aa9.36□□□□□ -0.91
MDC1-204ENST00000422266 DPP3Q9NY33 737 aa9.36□□□□□ -0.91
MDC1-204ENST00000422266 TFIP11Q9UBB9 837 aaKnown RBP9.36□□□□□ -0.91
MDC1-204ENST00000422266 ZMYM5Q9UJ78 669 aa9.36□□□□□ -0.91
MDC1-204ENST00000422266 MRPS23Q9Y3D9 190 aaKnown RBP9.36□□□□□ -0.91
MDC1-204ENST00000422266 ASB3Q9Y575 518 aa9.36□□□□□ -0.91
MDC1-204ENST00000422266 DENND4AQ7Z401 1863 aa9.36□□□□□ -0.91
MDC1-204ENST00000422266 PVALEFA0A1B0GWK0 134 aa9.35□□□□□ -0.91
MDC1-204ENST00000422266 ANO9A1A5B4 782 aa9.35□□□□□ -0.91
MDC1-204ENST00000422266 ANKRD63C9JTQ0 380 aa9.35□□□□□ -0.91
MDC1-204ENST00000422266 PIRO00625 290 aa9.35□□□□□ -0.91
MDC1-204ENST00000422266 ADAM12O43184 909 aa9.35□□□□□ -0.91
MDC1-204ENST00000422266 EXTL3O43909 919 aa9.35□□□□□ -0.91
MDC1-204ENST00000422266 PRPF40AO75400 957 aaKnown RBP9.35□□□□□ -0.91
MDC1-204ENST00000422266 CYP11A1P05108 521 aa9.35□□□□□ -0.91
MDC1-204ENST00000422266 RHOP08100 348 aa9.35□□□□□ -0.91
MDC1-204ENST00000422266 MYBP10242 640 aa9.35□□□□□ -0.91
MDC1-204ENST00000422266 ALDH1A3P47895 512 aa9.35□□□□□ -0.91
MDC1-204ENST00000422266 TUFMP49411 452 aaKnown RBP9.35□□□□□ -0.91
MDC1-204ENST00000422266 PLXNA3P51805 1871 aa9.35□□□□□ -0.91
MDC1-204ENST00000422266 EPHB3P54753 998 aa9.35□□□□□ -0.91
MDC1-204ENST00000422266 ASIC1P78348 528 aa9.35□□□□□ -0.91
MDC1-204ENST00000422266 KRT85P78386 507 aa9.35□□□□□ -0.91
MDC1-204ENST00000422266 ADCY1Q08828 1119 aa9.35□□□□□ -0.91
MDC1-204ENST00000422266 GPR17Q13304 367 aa9.35□□□□□ -0.91
MDC1-204ENST00000422266 BECN1Q14457 450 aa9.35□□□□□ -0.91
MDC1-204ENST00000422266 PDZD4Q76G19 769 aaPredicted RBP9.35□□□□□ -0.91
MDC1-204ENST00000422266 HS2ST1Q7LGA3 356 aa9.35□□□□□ -0.91
MDC1-204ENST00000422266 ITIH5Q86UX2 942 aa9.35□□□□□ -0.91
MDC1-204ENST00000422266 BRSK2Q8IWQ3 736 aa9.35□□□□□ -0.91
MDC1-204ENST00000422266 GPD1LQ8N335 351 aa9.35□□□□□ -0.91
MDC1-204ENST00000422266 SLC44A3Q8N4M1 653 aa9.35□□□□□ -0.91
MDC1-204ENST00000422266 GOLGA5Q8TBA6 731 aa9.35□□□□□ -0.91
MDC1-204ENST00000422266 FGF13Q92913 245 aa9.35□□□□□ -0.91
MDC1-204ENST00000422266 E2F7Q96AV8 911 aa9.35□□□□□ -0.91
MDC1-204ENST00000422266 DHX58Q96C10 678 aa9.35□□□□□ -0.91
MDC1-204ENST00000422266 ANKRD36BP1Q96IX9 119 aa9.35□□□□□ -0.91
MDC1-204ENST00000422266 SENP8Q96LD8 212 aa9.35□□□□□ -0.91
MDC1-204ENST00000422266 C7orf25Q9BPX7 421 aa9.35□□□□□ -0.91
MDC1-204ENST00000422266 ASAH2Q9NR71 780 aa9.35□□□□□ -0.91
MDC1-204ENST00000422266 SLC2A4RGQ9NR83 387 aa9.35□□□□□ -0.91
MDC1-204ENST00000422266 RBAKQ9NYW8 714 aaPredicted RBP9.35□□□□□ -0.91
MDC1-204ENST00000422266 TBC1D7Q9P0N9 293 aa9.35□□□□□ -0.91
MDC1-204ENST00000422266 ITGA11Q9UKX5 1188 aa9.35□□□□□ -0.91
MDC1-204ENST00000422266 INSL5Q9Y5Q6 135 aa9.35□□□□□ -0.91
MDC1-204ENST00000422266 C2orf16Q68DN1 1984 aa9.35□□□□□ -0.91
MDC1-204ENST00000422266 VWA8A3KMH1 1905 aa9.35□□□□□ -0.91
MDC1-204ENST00000422266 ZNF233A6NK53 670 aa9.34□□□□□ -0.91
MDC1-204ENST00000422266 STK25O00506 426 aa9.34□□□□□ -0.91
MDC1-204ENST00000422266 CYB561D2O14569 222 aa9.34□□□□□ -0.91
MDC1-204ENST00000422266 POLR2DO15514 142 aaKnown RBP9.34□□□□□ -0.91
MDC1-204ENST00000422266 MEFVO15553 781 aaPredicted RBP9.34□□□□□ -0.91
MDC1-204ENST00000422266 N4BP1O75113 896 aaKnown RBP9.34□□□□□ -0.91
MDC1-204ENST00000422266 ECI2O75521 394 aa9.34□□□□□ -0.91
MDC1-204ENST00000422266 KIF20AO95235 890 aa9.34□□□□□ -0.91
MDC1-204ENST00000422266 NFICP08651 508 aa9.34□□□□□ -0.91
MDC1-204ENST00000422266 TMEM191BP0C7N4 346 aa9.34□□□□□ -0.91
MDC1-204ENST00000422266 ADSSP30520 456 aa9.34□□□□□ -0.91
MDC1-204ENST00000422266 SPAG1Q07617 926 aa9.34□□□□□ -0.91
MDC1-204ENST00000422266 MYO1EQ12965 1108 aa9.34□□□□□ -0.91
MDC1-204ENST00000422266 HTR4Q13639 388 aa9.34□□□□□ -0.91
MDC1-204ENST00000422266 VEPH1Q14D04 833 aa9.34□□□□□ -0.91
MDC1-204ENST00000422266 E2F4Q16254 413 aa9.34□□□□□ -0.91
MDC1-204ENST00000422266 FAM26FQ5R3K3 315 aa9.34□□□□□ -0.91
MDC1-204ENST00000422266 RESP18Q5W5W9 173 aa9.34□□□□□ -0.91
MDC1-204ENST00000422266 PHLDB3Q6NSJ2 640 aa9.34□□□□□ -0.91
MDC1-204ENST00000422266 RSPO2Q6UXX9 243 aaPredicted RBP9.34□□□□□ -0.91
MDC1-204ENST00000422266 UNC13DQ70J99 1090 aa9.34□□□□□ -0.91
MDC1-204ENST00000422266 DCP1BQ8IZD4 617 aaKnown RBP9.34□□□□□ -0.91
MDC1-204ENST00000422266 TMEM86AQ8N2M4 240 aa9.34□□□□□ -0.91
MDC1-204ENST00000422266 LRRC52Q8N7C0 313 aa9.34□□□□□ -0.91
MDC1-204ENST00000422266 CCDC47Q96A33 483 aaKnown RBP9.34□□□□□ -0.91
MDC1-204ENST00000422266 FAM213AQ9BRX8 229 aa9.34□□□□□ -0.91
MDC1-204ENST00000422266 SCAND2PQ9GZW5 306 aaPredicted RBP9.34□□□□□ -0.91
MDC1-204ENST00000422266 DNMT3BQ9UBC3 853 aaKnown RBP9.34□□□□□ -0.91
MDC1-204ENST00000422266 RCOR1Q9UKL0 485 aa9.34□□□□□ -0.91
MDC1-204ENST00000422266 NUMBLQ9Y6R0 609 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms