RNA–Protein interactions for RNA: ENST00000420706.1

TMEM53-206, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-206ENST00000420706 FIBCD1Q8N539 461 aa13.41□□□□□ -0.26
TMEM53-206ENST00000420706 C3orf58Q8NDZ4 430 aa13.41□□□□□ -0.26
TMEM53-206ENST00000420706 SP7Q8TDD2 431 aaPredicted RBP13.41□□□□□ -0.26
TMEM53-206ENST00000420706 FAXDC2Q96IV6 333 aa13.41□□□□□ -0.26
TMEM53-206ENST00000420706 COLEC11Q9BWP8 271 aa13.41□□□□□ -0.26
TMEM53-206ENST00000420706 NAA15Q9BXJ9 866 aaKnown RBP13.41□□□□□ -0.26
TMEM53-206ENST00000420706 EDEM3Q9BZQ6 932 aa13.41□□□□□ -0.26
TMEM53-206ENST00000420706 TTYH3Q9C0H2 523 aa13.41□□□□□ -0.26
TMEM53-206ENST00000420706 UBE2TQ9NPD8 197 aaPredicted RBP13.41□□□□□ -0.26
TMEM53-206ENST00000420706 GDAP2Q9NXN4 497 aa13.41□□□□□ -0.26
TMEM53-206ENST00000420706 NXF1Q9UBU9 619 aaKnown RBP13.41□□□□□ -0.26
TMEM53-206ENST00000420706 FBXL5Q9UKA1 691 aa13.41□□□□□ -0.26
TMEM53-206ENST00000420706 DNAJC12Q9UKB3 198 aa13.41□□□□□ -0.26
TMEM53-206ENST00000420706 AJAP1Q9UKB5 411 aaPredicted RBP13.41□□□□□ -0.26
TMEM53-206ENST00000420706 POLIQ9UNA4 740 aa13.41□□□□□ -0.26
TMEM53-206ENST00000420706 DAAM1Q9Y4D1 1078 aa13.41□□□□□ -0.26
TMEM53-206ENST00000420706 MRPL42Q9Y6G3 142 aaKnown RBP13.41□□□□□ -0.26
TMEM53-206ENST00000420706 GRXCR1A8MXD5 290 aa13.4□□□□□ -0.26
TMEM53-206ENST00000420706 NT5C1B-RDH14C9J2C7 533 aa13.4□□□□□ -0.26
TMEM53-206ENST00000420706 F8W810 466 aa13.4□□□□□ -0.26
TMEM53-206ENST00000420706 RNF225M0QZC1 329 aaPredicted RBP13.4□□□□□ -0.26
TMEM53-206ENST00000420706 TLL1O43897 1013 aa13.4□□□□□ -0.26
TMEM53-206ENST00000420706 ITGB1P05556 798 aa13.4□□□□□ -0.26
TMEM53-206ENST00000420706 TRIM21P19474 475 aaKnown RBP13.4□□□□□ -0.26
TMEM53-206ENST00000420706 PAX3P23760 479 aa13.4□□□□□ -0.26
TMEM53-206ENST00000420706 BRCC3P46736 316 aa13.4□□□□□ -0.26
TMEM53-206ENST00000420706 AARSP49588 968 aaKnown RBP eCLIP13.4□□□□□ -0.26
TMEM53-206ENST00000420706 RABGGTBP53611 331 aa13.4□□□□□ -0.26
TMEM53-206ENST00000420706 POLR2FP61218 127 aaKnown RBP13.4□□□□□ -0.26
TMEM53-206ENST00000420706 GCNT1Q02742 428 aa13.4□□□□□ -0.26
TMEM53-206ENST00000420706 CUL2Q13617 745 aa13.4□□□□□ -0.26
TMEM53-206ENST00000420706 TIGD5Q53EQ6 642 aa13.4□□□□□ -0.26
TMEM53-206ENST00000420706 SPOUT1Q5T280 376 aaKnown RBP13.4□□□□□ -0.26
TMEM53-206ENST00000420706 PPM1KQ8N3J5 372 aa13.4□□□□□ -0.26
TMEM53-206ENST00000420706 CPLX3Q8WVH0 158 aa13.4□□□□□ -0.26
TMEM53-206ENST00000420706 ANP32BQ92688 251 aaKnown RBP13.4□□□□□ -0.26
TMEM53-206ENST00000420706 KAT5Q92993 513 aa13.4□□□□□ -0.26
TMEM53-206ENST00000420706 IQCDQ96DY2 449 aa13.4□□□□□ -0.26
TMEM53-206ENST00000420706 FAM81BQ96LP2 452 aa13.4□□□□□ -0.26
TMEM53-206ENST00000420706 KREMEN1Q96MU8 473 aa13.4□□□□□ -0.26
TMEM53-206ENST00000420706 NIF3L1Q9GZT8 377 aa13.4□□□□□ -0.26
TMEM53-206ENST00000420706 NLRC4Q9NPP4 1024 aa13.4□□□□□ -0.26
TMEM53-206ENST00000420706 MARCH5Q9NX47 278 aa13.4□□□□□ -0.26
TMEM53-206ENST00000420706 CEP72Q9P209 647 aa13.4□□□□□ -0.26
TMEM53-206ENST00000420706 PRG3Q9Y2Y8 225 aaPredicted RBP13.4□□□□□ -0.26
TMEM53-206ENST00000420706 SNX9Q9Y5X1 595 aa13.4□□□□□ -0.26
TMEM53-206ENST00000420706 FHOD1Q9Y613 1164 aa13.4□□□□□ -0.26
TMEM53-206ENST00000420706 A0A1W2PQJ5 194 aa13.39□□□□□ -0.27
TMEM53-206ENST00000420706 TADA2AO75478 443 aa13.39□□□□□ -0.27
TMEM53-206ENST00000420706 CLSTN1O94985 981 aa13.39□□□□□ -0.27
TMEM53-206ENST00000420706 KIF4AO95239 1232 aa13.39□□□□□ -0.27
TMEM53-206ENST00000420706 GYPCP04921 128 aa13.39□□□□□ -0.27
TMEM53-206ENST00000420706 LINC00271P0C7V0 271 aa13.39□□□□□ -0.27
TMEM53-206ENST00000420706 P4HA1P13674 534 aa13.39□□□□□ -0.27
TMEM53-206ENST00000420706 LAG3P18627 525 aa13.39□□□□□ -0.27
TMEM53-206ENST00000420706 RFX1P22670 979 aa13.39□□□□□ -0.27
TMEM53-206ENST00000420706 TBXAS1P24557 533 aaPredicted RBP13.39□□□□□ -0.27
TMEM53-206ENST00000420706 CASP14P31944 242 aa13.39□□□□□ -0.27
TMEM53-206ENST00000420706 ASPAP45381 313 aa13.39□□□□□ -0.27
TMEM53-206ENST00000420706 ALDH7A1P49419 539 aaKnown RBP13.39□□□□□ -0.27
TMEM53-206ENST00000420706 MFAP3P55082 362 aa13.39□□□□□ -0.27
TMEM53-206ENST00000420706 TNNC1P63316 161 aa13.39□□□□□ -0.27
TMEM53-206ENST00000420706 ARHGAP44Q17R89 818 aa13.39□□□□□ -0.27
TMEM53-206ENST00000420706 FAM109BQ6ICB4 259 aaPredicted RBP13.39□□□□□ -0.27
TMEM53-206ENST00000420706 KCNT2Q6UVM3 1135 aa13.39□□□□□ -0.27
TMEM53-206ENST00000420706 DPH6Q7L8W6 267 aa13.39□□□□□ -0.27
TMEM53-206ENST00000420706 LIMS2Q7Z4I7 341 aa13.39□□□□□ -0.27
TMEM53-206ENST00000420706 SPC24Q8NBT2 197 aa13.39□□□□□ -0.27
TMEM53-206ENST00000420706 HASPINQ8TF76 798 aa13.39□□□□□ -0.27
TMEM53-206ENST00000420706 SENP8Q96LD8 212 aa13.39□□□□□ -0.27
TMEM53-206ENST00000420706 STK33Q9BYT3 514 aa13.39□□□□□ -0.27
TMEM53-206ENST00000420706 BCO2Q9BYV7 579 aa13.39□□□□□ -0.27
TMEM53-206ENST00000420706 CAPN11Q9UMQ6 739 aa13.39□□□□□ -0.27
TMEM53-206ENST00000420706 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.38□□□□□ -0.27
TMEM53-206ENST00000420706 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.38□□□□□ -0.27
TMEM53-206ENST00000420706 LCHNA4D1U4 455 aa13.38□□□□□ -0.27
TMEM53-206ENST00000420706 CARNS1A5YM72 827 aa13.38□□□□□ -0.27
TMEM53-206ENST00000420706 M0QZQ0 153 aa13.38□□□□□ -0.27
TMEM53-206ENST00000420706 CYB561D2O14569 222 aa13.38□□□□□ -0.27
TMEM53-206ENST00000420706 WEE2P0C1S8 567 aa13.38□□□□□ -0.27
TMEM53-206ENST00000420706 FAM163BP0C2L3 166 aa13.38□□□□□ -0.27
TMEM53-206ENST00000420706 PBX3P40426 434 aa13.38□□□□□ -0.27
TMEM53-206ENST00000420706 FXR1P51114 621 aaKnown RBP eCLIP13.38□□□□□ -0.27
TMEM53-206ENST00000420706 CDH8P55286 799 aa13.38□□□□□ -0.27
TMEM53-206ENST00000420706 TRIM14Q14142 442 aa13.38□□□□□ -0.27
TMEM53-206ENST00000420706 DRAP1Q14919 205 aaPredicted RBP13.38□□□□□ -0.27
TMEM53-206ENST00000420706 SOWAHAQ2M3V2 549 aa13.38□□□□□ -0.27
TMEM53-206ENST00000420706 DSTYKQ6XUX3 929 aa13.38□□□□□ -0.27
TMEM53-206ENST00000420706 ENOSF1Q7L5Y1 443 aa13.38□□□□□ -0.27
TMEM53-206ENST00000420706 CACNA2D4Q7Z3S7 1137 aa13.38□□□□□ -0.27
TMEM53-206ENST00000420706 PPFIBP1Q86W92 1011 aa13.38□□□□□ -0.27
TMEM53-206ENST00000420706 SLC39A11Q8N1S5 342 aa13.38□□□□□ -0.27
TMEM53-206ENST00000420706 TOP6BLQ8N6T0 577 aa13.38□□□□□ -0.27
TMEM53-206ENST00000420706 UBR7Q8N806 425 aa13.38□□□□□ -0.27
TMEM53-206ENST00000420706 COLGALT1Q8NBJ5 622 aa13.38□□□□□ -0.27
TMEM53-206ENST00000420706 BAP1Q92560 729 aa13.38□□□□□ -0.27
TMEM53-206ENST00000420706 CLP1Q92989 425 aaKnown RBP13.38□□□□□ -0.27
TMEM53-206ENST00000420706 JAKMIP2Q96AA8 810 aa13.38□□□□□ -0.27
TMEM53-206ENST00000420706 IGSF21Q96ID5 467 aa13.38□□□□□ -0.27
TMEM53-206ENST00000420706 PDLIM2Q96JY6 352 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms