RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 CD19P15391 556 aa9.38□□□□□ -0.91
SNCA-206ENST00000420646 ARF4P18085 180 aaPredicted RBP9.38□□□□□ -0.91
SNCA-206ENST00000420646 VPS41P49754 854 aa9.38□□□□□ -0.91
SNCA-206ENST00000420646 ADCY2Q08462 1091 aa9.38□□□□□ -0.91
SNCA-206ENST00000420646 MAMLD1Q13495 774 aa9.38□□□□□ -0.91
SNCA-206ENST00000420646 TXNRD3NBQ6F5E7 133 aa9.38□□□□□ -0.91
SNCA-206ENST00000420646 JADE1Q6IE81 842 aa9.38□□□□□ -0.91
SNCA-206ENST00000420646 KCNV1Q6PIU1 500 aa9.38□□□□□ -0.91
SNCA-206ENST00000420646 CCDC137Q6PK04 289 aaKnown RBP9.38□□□□□ -0.91
SNCA-206ENST00000420646 ENOSF1Q7L5Y1 443 aa9.38□□□□□ -0.91
SNCA-206ENST00000420646 KIAA0319LQ8IZA0 1049 aa9.38□□□□□ -0.91
SNCA-206ENST00000420646 FBXO25Q8TCJ0 367 aa9.38□□□□□ -0.91
SNCA-206ENST00000420646 UBLCP1Q8WVY7 318 aaPredicted RBP9.38□□□□□ -0.91
SNCA-206ENST00000420646 TCP11Q8WWU5 503 aa9.38□□□□□ -0.91
SNCA-206ENST00000420646 IMPG2Q9BZV3 1241 aa9.38□□□□□ -0.91
SNCA-206ENST00000420646 XYLT2Q9H1B5 865 aa9.38□□□□□ -0.91
SNCA-206ENST00000420646 CHST7Q9NS84 486 aa9.38□□□□□ -0.91
SNCA-206ENST00000420646 R3HDM2Q9Y2K5 976 aaKnown RBP9.38□□□□□ -0.91
SNCA-206ENST00000420646 UTP11Q9Y3A2 253 aaKnown RBP9.38□□□□□ -0.91
SNCA-206ENST00000420646 PCDHA3Q9Y5H8 950 aa9.38□□□□□ -0.91
SNCA-206ENST00000420646 CCDC188H7C350 402 aa9.37□□□□□ -0.91
SNCA-206ENST00000420646 DYNC1LI2O43237 492 aaPredicted RBP9.37□□□□□ -0.91
SNCA-206ENST00000420646 ITGB3P05106 788 aa9.37□□□□□ -0.91
SNCA-206ENST00000420646 STAG3L1P0CL83 205 aa9.37□□□□□ -0.91
SNCA-206ENST00000420646 CTNNA1P35221 906 aaKnown RBP9.37□□□□□ -0.91
SNCA-206ENST00000420646 HADHBP55084 474 aaKnown RBP9.37□□□□□ -0.91
SNCA-206ENST00000420646 DHX9Q08211 1270 aaKnown RBP9.37□□□□□ -0.91
SNCA-206ENST00000420646 ZNF699Q32M78 642 aa9.37□□□□□ -0.91
SNCA-206ENST00000420646 ZFYVE27Q5T4F4 411 aa9.37□□□□□ -0.91
SNCA-206ENST00000420646 TSHZ1Q6ZSZ6 1077 aa9.37□□□□□ -0.91
SNCA-206ENST00000420646 SLC13A5Q86YT5 568 aaPredicted RBP9.37□□□□□ -0.91
SNCA-206ENST00000420646 JAMLQ86YT9 394 aa9.37□□□□□ -0.91
SNCA-206ENST00000420646 WDR49Q8IV35 697 aa9.37□□□□□ -0.91
SNCA-206ENST00000420646 CCDC105Q8IYK2 499 aa9.37□□□□□ -0.91
SNCA-206ENST00000420646 WDTC1Q8N5D0 677 aa9.37□□□□□ -0.91
SNCA-206ENST00000420646 GOLGA6L1Q8N7Z2 621 aa9.37□□□□□ -0.91
SNCA-206ENST00000420646 C1orf127Q8N9H9 656 aa9.37□□□□□ -0.91
SNCA-206ENST00000420646 CCDC26Q8TAB7 109 aa9.37□□□□□ -0.91
SNCA-206ENST00000420646 VTI1AQ96AJ9 217 aa9.37□□□□□ -0.91
SNCA-206ENST00000420646 TWNKQ96RR1 684 aa9.37□□□□□ -0.91
SNCA-206ENST00000420646 RUFY1Q96T51 708 aa9.37□□□□□ -0.91
SNCA-206ENST00000420646 KATNBL1Q9H079 304 aa9.37□□□□□ -0.91
SNCA-206ENST00000420646 DNAJC17Q9NVM6 304 aaKnown RBP9.37□□□□□ -0.91
SNCA-206ENST00000420646 SIX4Q9UIU6 781 aa9.37□□□□□ -0.91
SNCA-206ENST00000420646 IQCA1LA6NCM1 817 aa9.37□□□□□ -0.91
SNCA-206ENST00000420646 F8VP50 259 aa9.37□□□□□ -0.91
SNCA-206ENST00000420646 TLR3O15455 904 aaKnown RBP9.37□□□□□ -0.91
SNCA-206ENST00000420646 CETPP11597 493 aa9.37□□□□□ -0.91
SNCA-206ENST00000420646 PROZP22891 400 aa9.37□□□□□ -0.91
SNCA-206ENST00000420646 CENPCQ03188 943 aa9.37□□□□□ -0.91
SNCA-206ENST00000420646 CEP85LQ5SZL2 805 aa9.37□□□□□ -0.91
SNCA-206ENST00000420646 MARCH8Q5T0T0 291 aa9.37□□□□□ -0.91
SNCA-206ENST00000420646 CCDC50Q8IVM0 306 aa9.37□□□□□ -0.91
SNCA-206ENST00000420646 RNF25Q96BH1 459 aaPredicted RBP9.37□□□□□ -0.91
SNCA-206ENST00000420646 MAML3Q96JK9 1138 aa9.37□□□□□ -0.91
SNCA-206ENST00000420646 PWWP2AQ96N64 755 aa9.37□□□□□ -0.91
SNCA-206ENST00000420646 RPS6KC1Q96S38 1066 aa9.37□□□□□ -0.91
SNCA-206ENST00000420646 SDCBP2Q9H190 292 aa9.37□□□□□ -0.91
SNCA-206ENST00000420646 SMYD3Q9H7B4 428 aa9.37□□□□□ -0.91
SNCA-206ENST00000420646 GBA2Q9HCG7 927 aaPredicted RBP9.37□□□□□ -0.91
SNCA-206ENST00000420646 TMEM51Q9NW97 253 aa9.37□□□□□ -0.91
SNCA-206ENST00000420646 BCCIPQ9P287 314 aaKnown RBP eCLIP9.37□□□□□ -0.91
SNCA-206ENST00000420646 UVRAGQ9P2Y5 699 aa9.37□□□□□ -0.91
SNCA-206ENST00000420646 KCNG1Q9UIX4 513 aa9.37□□□□□ -0.91
SNCA-206ENST00000420646 PNMA3Q9UL41 463 aa9.37□□□□□ -0.91
SNCA-206ENST00000420646 DIS3Q9Y2L1 958 aaKnown RBP9.37□□□□□ -0.91
SNCA-206ENST00000420646 DAAM1Q9Y4D1 1078 aa9.37□□□□□ -0.91
SNCA-206ENST00000420646 DCDC2CA8MYV0 355 aa9.36□□□□□ -0.91
SNCA-206ENST00000420646 GOLGA8SH3BPF8 625 aa9.36□□□□□ -0.91
SNCA-206ENST00000420646 ATP8B3O60423 1300 aa9.36□□□□□ -0.91
SNCA-206ENST00000420646 GH1P01241 217 aa9.36□□□□□ -0.91
SNCA-206ENST00000420646 KRT10P13645 584 aa9.36□□□□□ -0.91
SNCA-206ENST00000420646 TNFRSF8P28908 595 aa9.36□□□□□ -0.91
SNCA-206ENST00000420646 ASPAP45381 313 aa9.36□□□□□ -0.91
SNCA-206ENST00000420646 RPL21P46778 160 aaKnown RBP9.36□□□□□ -0.91
SNCA-206ENST00000420646 RWDD2BP57060 319 aa9.36□□□□□ -0.91
SNCA-206ENST00000420646 CCNA1P78396 465 aa9.36□□□□□ -0.91
SNCA-206ENST00000420646 LAMC2Q13753 1193 aa9.36□□□□□ -0.91
SNCA-206ENST00000420646 SIX1Q15475 284 aaPredicted RBP9.36□□□□□ -0.91
SNCA-206ENST00000420646 CCL14Q16627 93 aa9.36□□□□□ -0.91
SNCA-206ENST00000420646 AMHR2Q16671 573 aa9.36□□□□□ -0.91
SNCA-206ENST00000420646 SEL1L2Q5TEA6 688 aa9.36□□□□□ -0.91
SNCA-206ENST00000420646 KAZNQ674X7 775 aa9.36□□□□□ -0.91
SNCA-206ENST00000420646 PNMA8AQ86V59 439 aaPredicted RBP9.36□□□□□ -0.91
SNCA-206ENST00000420646 MORC4Q8TE76 937 aa9.36□□□□□ -0.91
SNCA-206ENST00000420646 EXOC4Q96A65 974 aa9.36□□□□□ -0.91
SNCA-206ENST00000420646 ERP44Q9BS26 406 aa9.36□□□□□ -0.91
SNCA-206ENST00000420646 WNT8AQ9H1J5 351 aa9.36□□□□□ -0.91
SNCA-206ENST00000420646 CYTH4Q9UIA0 394 aa9.36□□□□□ -0.91
SNCA-206ENST00000420646 TTC7AQ9ULT0 858 aaPredicted RBP9.36□□□□□ -0.91
SNCA-206ENST00000420646 GOLGA6L10A0A0M3HER8 536 aa9.36□□□□□ -0.91
SNCA-206ENST00000420646 MIF4GDA9UHW6 222 aaKnown RBP9.36□□□□□ -0.91
SNCA-206ENST00000420646 MTA2O94776 668 aa9.36□□□□□ -0.91
SNCA-206ENST00000420646 RALAP11233 206 aa9.36□□□□□ -0.91
SNCA-206ENST00000420646 HNRNPH2P55795 449 aaKnown RBP9.36□□□□□ -0.91
SNCA-206ENST00000420646 ZNF200P98182 395 aaPredicted RBP9.36□□□□□ -0.91
SNCA-206ENST00000420646 OGDHQ02218 1023 aa9.36□□□□□ -0.91
SNCA-206ENST00000420646 PTP4A2Q12974 167 aa9.36□□□□□ -0.91
SNCA-206ENST00000420646 NNTQ13423 1086 aa9.36□□□□□ -0.91
SNCA-206ENST00000420646 HIC1Q14526 733 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 126.2 ms