RNA–Protein interactions for RNA: ENST00000420539.1

PTP4A1P1-201, Transcript of protein tyrosine phosphatase type IVA, member 1 pseudogene 1, humanhuman

BASIC

Gene PTP4A1P1, Length 515 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1P1-201ENST00000420539 EIF4A2Q14240 407 aaKnown RBP6.1□□□□□ -1.43
PTP4A1P1-201ENST00000420539 TAF7Q15545 349 aaPredicted RBP6.1□□□□□ -1.43
PTP4A1P1-201ENST00000420539 TESK1Q15569 626 aa6.1□□□□□ -1.43
PTP4A1P1-201ENST00000420539 CTXN3Q4LDR2 81 aa6.1□□□□□ -1.43
PTP4A1P1-201ENST00000420539 CCDC157Q569K6 752 aa6.1□□□□□ -1.43
PTP4A1P1-201ENST00000420539 C1orf141Q5JVX7 400 aa6.1□□□□□ -1.43
PTP4A1P1-201ENST00000420539 NAA16Q6N069 864 aaPredicted RBP6.1□□□□□ -1.43
PTP4A1P1-201ENST00000420539 ESRP1Q6NXG1 681 aaKnown RBP6.1□□□□□ -1.43
PTP4A1P1-201ENST00000420539 TMTC3Q6ZXV5 915 aa6.1□□□□□ -1.43
PTP4A1P1-201ENST00000420539 PRPF39Q86UA1 669 aaKnown RBP6.1□□□□□ -1.43
PTP4A1P1-201ENST00000420539 CCDC103Q8IW40 242 aa6.1□□□□□ -1.43
PTP4A1P1-201ENST00000420539 LRRC71Q8N4P6 559 aa6.1□□□□□ -1.43
PTP4A1P1-201ENST00000420539 GSDMBQ8TAX9 411 aa6.1□□□□□ -1.43
PTP4A1P1-201ENST00000420539 PANK1Q8TE04 598 aa6.1□□□□□ -1.43
PTP4A1P1-201ENST00000420539 OTUD7AQ8TE49 926 aaPredicted RBP6.1□□□□□ -1.43
PTP4A1P1-201ENST00000420539 UTP15Q8TED0 518 aaKnown RBP6.1□□□□□ -1.43
PTP4A1P1-201ENST00000420539 TAF4BQ92750 862 aa6.1□□□□□ -1.43
PTP4A1P1-201ENST00000420539 MSLNLQ96KJ4 702 aa6.1□□□□□ -1.43
PTP4A1P1-201ENST00000420539 FCRL2Q96LA5 508 aaPredicted RBP6.1□□□□□ -1.43
PTP4A1P1-201ENST00000420539 PPP1R9BQ96SB3 815 aa6.1□□□□□ -1.43
PTP4A1P1-201ENST00000420539 ANO3Q9BYT9 981 aa6.1□□□□□ -1.43
PTP4A1P1-201ENST00000420539 CD244Q9BZW8 370 aa6.1□□□□□ -1.43
PTP4A1P1-201ENST00000420539 PRDM13Q9H4Q3 707 aa6.1□□□□□ -1.43
PTP4A1P1-201ENST00000420539 PCIF1Q9H4Z3 704 aa6.1□□□□□ -1.43
PTP4A1P1-201ENST00000420539 SAYSD1Q9NPB0 183 aa6.1□□□□□ -1.43
PTP4A1P1-201ENST00000420539 PAK6Q9NQU5 681 aaPredicted RBP6.1□□□□□ -1.43
PTP4A1P1-201ENST00000420539 CATSPERZQ9NTU4 200 aa6.1□□□□□ -1.43
PTP4A1P1-201ENST00000420539 EBF1Q9UH73 591 aa6.1□□□□□ -1.43
PTP4A1P1-201ENST00000420539 MSRAQ9UJ68 235 aa6.1□□□□□ -1.43
PTP4A1P1-201ENST00000420539 CCDC69A6NI79 296 aa6.09□□□□□ -1.43
PTP4A1P1-201ENST00000420539 ISM1B1AKI9 464 aa6.09□□□□□ -1.43
PTP4A1P1-201ENST00000420539 NT5C1B-RDH14C9J2C7 533 aa6.09□□□□□ -1.43
PTP4A1P1-201ENST00000420539 MTSS1O43312 755 aa6.09□□□□□ -1.43
PTP4A1P1-201ENST00000420539 TSPAN3O60637 253 aa6.09□□□□□ -1.43
PTP4A1P1-201ENST00000420539 SRGAP2O75044 1071 aa6.09□□□□□ -1.43
PTP4A1P1-201ENST00000420539 ADAMTS4O75173 837 aa6.09□□□□□ -1.43
PTP4A1P1-201ENST00000420539 HNRNPA1P09651 372 aaKnown RBP eCLIP6.09□□□□□ -1.43
PTP4A1P1-201ENST00000420539 CCDC159P0C7I6 412 aa6.09□□□□□ -1.43
PTP4A1P1-201ENST00000420539 NR2F1P10589 423 aa6.09□□□□□ -1.43
PTP4A1P1-201ENST00000420539 MTHFD2P13995 350 aa6.09□□□□□ -1.43
PTP4A1P1-201ENST00000420539 BRAFP15056 766 aa6.09□□□□□ -1.43
PTP4A1P1-201ENST00000420539 SLC7A1P30825 629 aa6.09□□□□□ -1.43
PTP4A1P1-201ENST00000420539 LTBRP36941 435 aa6.09□□□□□ -1.43
PTP4A1P1-201ENST00000420539 MCM2P49736 904 aa6.09□□□□□ -1.43
PTP4A1P1-201ENST00000420539 ALDH3A2P51648 485 aa6.09□□□□□ -1.43
PTP4A1P1-201ENST00000420539 KIF11P52732 1056 aa6.09□□□□□ -1.43
PTP4A1P1-201ENST00000420539 POLR2FP61218 127 aaKnown RBP6.09□□□□□ -1.43
PTP4A1P1-201ENST00000420539 HTRA4P83105 476 aaPredicted RBP6.09□□□□□ -1.43
PTP4A1P1-201ENST00000420539 CHRNDQ07001 517 aa6.09□□□□□ -1.43
PTP4A1P1-201ENST00000420539 SLC12A1Q13621 1099 aa6.09□□□□□ -1.43
PTP4A1P1-201ENST00000420539 FGL2Q14314 439 aa6.09□□□□□ -1.43
PTP4A1P1-201ENST00000420539 SF3B3Q15393 1217 aaKnown RBP6.09□□□□□ -1.43
PTP4A1P1-201ENST00000420539 CRY1Q16526 586 aa6.09□□□□□ -1.43
PTP4A1P1-201ENST00000420539 INF2Q27J81 1249 aa6.09□□□□□ -1.43
PTP4A1P1-201ENST00000420539 VWA3BQ502W6 1294 aa6.09□□□□□ -1.43
PTP4A1P1-201ENST00000420539 MBLAC2Q68D91 279 aa6.09□□□□□ -1.43
PTP4A1P1-201ENST00000420539 FSTL4Q6MZW2 842 aa6.09□□□□□ -1.43
PTP4A1P1-201ENST00000420539 SLC22A25Q6T423 547 aa6.09□□□□□ -1.43
PTP4A1P1-201ENST00000420539 NUP54Q7Z3B4 507 aa6.09□□□□□ -1.43
PTP4A1P1-201ENST00000420539 CXorf67Q86X51 503 aaPredicted RBP6.09□□□□□ -1.43
PTP4A1P1-201ENST00000420539 UNC45BQ8IWX7 931 aa6.09□□□□□ -1.43
PTP4A1P1-201ENST00000420539 RPAP2Q8IXW5 612 aaPredicted RBP6.09□□□□□ -1.43
PTP4A1P1-201ENST00000420539 FANCBQ8NB91 859 aa6.09□□□□□ -1.43
PTP4A1P1-201ENST00000420539 KCTD6Q8NC69 237 aa6.09□□□□□ -1.43
PTP4A1P1-201ENST00000420539 TMEM52Q8NDY8 209 aa6.09□□□□□ -1.43
PTP4A1P1-201ENST00000420539 MOSPD2Q8NHP6 518 aa6.09□□□□□ -1.43
PTP4A1P1-201ENST00000420539 RGMAQ96B86 450 aa6.09□□□□□ -1.43
PTP4A1P1-201ENST00000420539 ASIC4Q96FT7 647 aa6.09□□□□□ -1.43
PTP4A1P1-201ENST00000420539 MAP6Q96JE9 813 aa6.09□□□□□ -1.43
PTP4A1P1-201ENST00000420539 HHIPL1Q96JK4 782 aa6.09□□□□□ -1.43
PTP4A1P1-201ENST00000420539 CHAMP1Q96JM3 812 aa6.09□□□□□ -1.43
PTP4A1P1-201ENST00000420539 COG8Q96MW5 612 aa6.09□□□□□ -1.43
PTP4A1P1-201ENST00000420539 GPR63Q9BZJ6 419 aa6.09□□□□□ -1.43
PTP4A1P1-201ENST00000420539 LMCD1Q9NZU5 365 aa6.09□□□□□ -1.43
PTP4A1P1-201ENST00000420539 IGSF9Q9P2J2 1179 aa6.09□□□□□ -1.43
PTP4A1P1-201ENST00000420539 TMEM59LQ9UK28 342 aa6.09□□□□□ -1.43
PTP4A1P1-201ENST00000420539 COG5Q9UP83 839 aa6.09□□□□□ -1.43
PTP4A1P1-201ENST00000420539 SCAF8Q9UPN6 1271 aaKnown RBP6.09□□□□□ -1.43
PTP4A1P1-201ENST00000420539 MAN2B2Q9Y2E5 1009 aa6.09□□□□□ -1.43
PTP4A1P1-201ENST00000420539 A0A1W2PPL8 197 aa6.08□□□□□ -1.44
PTP4A1P1-201ENST00000420539 LRRC14BA6NHZ5 514 aa6.08□□□□□ -1.44
PTP4A1P1-201ENST00000420539 FAM47E-STBD1D6RA91 191 aa6.08□□□□□ -1.44
PTP4A1P1-201ENST00000420539 UBE2CO00762 179 aa6.08□□□□□ -1.44
PTP4A1P1-201ENST00000420539 SPTLC2O15270 562 aa6.08□□□□□ -1.44
PTP4A1P1-201ENST00000420539 IPO8O15397 1037 aaKnown RBP6.08□□□□□ -1.44
PTP4A1P1-201ENST00000420539 SCGB1D1O95968 90 aa6.08□□□□□ -1.44
PTP4A1P1-201ENST00000420539 WNT11O96014 354 aa6.08□□□□□ -1.44
PTP4A1P1-201ENST00000420539 ZGLP1P0C6A0 271 aa6.08□□□□□ -1.44
PTP4A1P1-201ENST00000420539 SRGAP2BP0DMP2 458 aa6.08□□□□□ -1.44
PTP4A1P1-201ENST00000420539 KITP10721 976 aa6.08□□□□□ -1.44
PTP4A1P1-201ENST00000420539 ACADMP11310 421 aa6.08□□□□□ -1.44
PTP4A1P1-201ENST00000420539 FGFR4P22455 802 aa6.08□□□□□ -1.44
PTP4A1P1-201ENST00000420539 AOAHP28039 575 aa6.08□□□□□ -1.44
PTP4A1P1-201ENST00000420539 ACSL1P33121 698 aa6.08□□□□□ -1.44
PTP4A1P1-201ENST00000420539 MANFP55145 182 aaKnown RBP6.08□□□□□ -1.44
PTP4A1P1-201ENST00000420539 BCAR1P56945 870 aa6.08□□□□□ -1.44
PTP4A1P1-201ENST00000420539 NLRP5P59047 1200 aa6.08□□□□□ -1.44
PTP4A1P1-201ENST00000420539 CREB5Q02930 508 aa6.08□□□□□ -1.44
PTP4A1P1-201ENST00000420539 TFCP2Q12800 502 aa6.08□□□□□ -1.44
PTP4A1P1-201ENST00000420539 LRMPQ12912 555 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms