RNA–Protein interactions for RNA: ENST00000419533.1

UBR4-206, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 5,583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-206ENST00000419533 TTC7AQ9ULT0 858 aaPredicted RBP8.89□□□□□ -0.99
UBR4-206ENST00000419533 AK9Q5TCS8 1911 aa8.89□□□□□ -0.99
UBR4-206ENST00000419533 HLA-DRAP01903 254 aa8.89□□□□□ -0.99
UBR4-206ENST00000419533 HMBSP08397 361 aa8.89□□□□□ -0.99
UBR4-206ENST00000419533 PTPRAP18433 802 aa8.89□□□□□ -0.99
UBR4-206ENST00000419533 CYP11B2P19099 503 aa8.89□□□□□ -0.99
UBR4-206ENST00000419533 EIF3EP60228 445 aaKnown RBP8.89□□□□□ -0.99
UBR4-206ENST00000419533 FSCBQ5H9T9 825 aa8.89□□□□□ -0.99
UBR4-206ENST00000419533 EFHC1Q5JVL4 640 aa8.89□□□□□ -0.99
UBR4-206ENST00000419533 ATP11CQ8NB49 1132 aa8.89□□□□□ -0.99
UBR4-206ENST00000419533 TTC17Q96AE7 1141 aa8.89□□□□□ -0.99
UBR4-206ENST00000419533 EEF2KO00418 725 aaKnown RBP8.89□□□□□ -0.99
UBR4-206ENST00000419533 ASMTLO95671 621 aa8.89□□□□□ -0.99
UBR4-206ENST00000419533 GNRH1P01148 92 aa8.89□□□□□ -0.99
UBR4-206ENST00000419533 HOXC6P09630 235 aa8.89□□□□□ -0.99
UBR4-206ENST00000419533 NR1D1P20393 614 aa8.89□□□□□ -0.99
UBR4-206ENST00000419533 SSTR3P32745 418 aaPredicted RBP8.89□□□□□ -0.99
UBR4-206ENST00000419533 DEUP1Q05D60 604 aa8.89□□□□□ -0.99
UBR4-206ENST00000419533 SPRYD7Q5W111 196 aa8.89□□□□□ -0.99
UBR4-206ENST00000419533 ZNF677Q86XU0 584 aa8.89□□□□□ -0.99
UBR4-206ENST00000419533 CERS5Q8N5B7 392 aa8.89□□□□□ -0.99
UBR4-206ENST00000419533 OSBPL9Q96SU4 736 aa8.89□□□□□ -0.99
UBR4-206ENST00000419533 TACO1Q9BSH4 297 aaKnown RBP8.89□□□□□ -0.99
UBR4-206ENST00000419533 UPF3AQ9H1J1 476 aaKnown RBP8.89□□□□□ -0.99
UBR4-206ENST00000419533 HMX1Q9NP08 348 aaPredicted RBP8.89□□□□□ -0.99
UBR4-206ENST00000419533 GTSE1Q9NYZ3 720 aa8.89□□□□□ -0.99
UBR4-206ENST00000419533 G3BP2Q9UN86 482 aaKnown RBP8.89□□□□□ -0.99
UBR4-206ENST00000419533 RASA4BC9J798 803 aa8.88□□□□□ -0.99
UBR4-206ENST00000419533 PI4K2BG5E9Z4 385 aa8.88□□□□□ -0.99
UBR4-206ENST00000419533 FOXP2O15409 715 aa8.88□□□□□ -0.99
UBR4-206ENST00000419533 RASA4O43374 803 aa8.88□□□□□ -0.99
UBR4-206ENST00000419533 SMIM24O75264 130 aa8.88□□□□□ -0.99
UBR4-206ENST00000419533 VCAM1P19320 739 aa8.88□□□□□ -0.99
UBR4-206ENST00000419533 HADHAP40939 763 aa8.88□□□□□ -0.99
UBR4-206ENST00000419533 DGKZQ13574 1117 aa8.88□□□□□ -0.99
UBR4-206ENST00000419533 HP1BP3Q5SSJ5 553 aaPredicted RBP8.88□□□□□ -0.99
UBR4-206ENST00000419533 THEMIS2Q5TEJ8 643 aa8.88□□□□□ -0.99
UBR4-206ENST00000419533 IL31Q6EBC2 164 aa8.88□□□□□ -0.99
UBR4-206ENST00000419533 PPM1NQ8N819 430 aa8.88□□□□□ -0.99
UBR4-206ENST00000419533 GBP5Q96PP8 586 aa8.88□□□□□ -0.99
UBR4-206ENST00000419533 FGFR1OP2Q9NVK5 253 aa8.88□□□□□ -0.99
UBR4-206ENST00000419533 PLAAQ9Y263 795 aa8.88□□□□□ -0.99
UBR4-206ENST00000419533 MSH4O15457 936 aa8.88□□□□□ -0.99
UBR4-206ENST00000419533 IRF1P10914 325 aa8.88□□□□□ -0.99
UBR4-206ENST00000419533 SESN3P58005 492 aa8.88□□□□□ -0.99
UBR4-206ENST00000419533 NOP14P78316 857 aaKnown RBP8.88□□□□□ -0.99
UBR4-206ENST00000419533 POU5F1BQ06416 359 aa8.88□□□□□ -0.99
UBR4-206ENST00000419533 PDIA2Q13087 525 aaKnown RBP8.88□□□□□ -0.99
UBR4-206ENST00000419533 DHX34Q14147 1143 aaKnown RBP8.88□□□□□ -0.99
UBR4-206ENST00000419533 SYDE1Q6ZW31 735 aaPredicted RBP8.88□□□□□ -0.99
UBR4-206ENST00000419533 DHX40Q8IX18 779 aaKnown RBP8.88□□□□□ -0.99
UBR4-206ENST00000419533 DNERQ8NFT8 737 aa8.88□□□□□ -0.99
UBR4-206ENST00000419533 HPDLQ96IR7 371 aa8.88□□□□□ -0.99
UBR4-206ENST00000419533 STARD7Q9NQZ5 370 aa8.88□□□□□ -0.99
UBR4-206ENST00000419533 FBXO28Q9NVF7 368 aa8.88□□□□□ -0.99
UBR4-206ENST00000419533 TUBE1Q9UJT0 475 aa8.88□□□□□ -0.99
UBR4-206ENST00000419533 MYO1CO00159 1063 aa8.88□□□□□ -0.99
UBR4-206ENST00000419533 TEX33O43247 280 aa8.88□□□□□ -0.99
UBR4-206ENST00000419533 OPHN1O60890 802 aa8.88□□□□□ -0.99
UBR4-206ENST00000419533 ANP32DO95626 131 aa8.88□□□□□ -0.99
UBR4-206ENST00000419533 EGFRP00533 1210 aa8.88□□□□□ -0.99
UBR4-206ENST00000419533 PMS2P54278 862 aa8.88□□□□□ -0.99
UBR4-206ENST00000419533 ARHGEF7Q14155 803 aa8.88□□□□□ -0.99
UBR4-206ENST00000419533 P3H1Q32P28 736 aa8.88□□□□□ -0.99
UBR4-206ENST00000419533 SYTL3Q4VX76 610 aa8.88□□□□□ -0.99
UBR4-206ENST00000419533 CCDC137Q6PK04 289 aaKnown RBP8.88□□□□□ -0.99
UBR4-206ENST00000419533 TRAPPC11Q7Z392 1133 aa8.88□□□□□ -0.99
UBR4-206ENST00000419533 SZRD1Q7Z422 152 aa8.88□□□□□ -0.99
UBR4-206ENST00000419533 PDCD7Q8N8D1 485 aaKnown RBP8.88□□□□□ -0.99
UBR4-206ENST00000419533 KRT35Q92764 455 aa8.88□□□□□ -0.99
UBR4-206ENST00000419533 TRIM55Q9BYV6 548 aa8.88□□□□□ -0.99
UBR4-206ENST00000419533 SPDYE5A6NIY4 337 aa8.88□□□□□ -0.99
UBR4-206ENST00000419533 F5H423 210 aaPredicted RBP8.88□□□□□ -0.99
UBR4-206ENST00000419533 MAPK13O15264 365 aa8.88□□□□□ -0.99
UBR4-206ENST00000419533 FAM200BP0CF97 657 aa8.88□□□□□ -0.99
UBR4-206ENST00000419533 TBCCQ15814 346 aa8.88□□□□□ -0.99
UBR4-206ENST00000419533 SNCBQ16143 134 aa8.88□□□□□ -0.99
UBR4-206ENST00000419533 CATSPER3Q86XQ3 398 aa8.88□□□□□ -0.99
UBR4-206ENST00000419533 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.88□□□□□ -0.99
UBR4-206ENST00000419533 AFF4Q9UHB7 1163 aaKnown RBP8.88□□□□□ -0.99
UBR4-206ENST00000419533 TBX20Q9UMR3 447 aa8.88□□□□□ -0.99
UBR4-206ENST00000419533 PACSIN2Q9UNF0 486 aaPredicted RBP8.88□□□□□ -0.99
UBR4-206ENST00000419533 TRIM33Q9UPN9 1127 aa8.88□□□□□ -0.99
UBR4-206ENST00000419533 APOBEC2Q9Y235 224 aaKnown RBP8.88□□□□□ -0.99
UBR4-206ENST00000419533 PCDHB2Q9Y5E7 798 aa8.88□□□□□ -0.99
UBR4-206ENST00000419533 PIK3R2O00459 728 aa8.88□□□□□ -0.99
UBR4-206ENST00000419533 OAZ1P54368 228 aa8.88□□□□□ -0.99
UBR4-206ENST00000419533 PHEXP78562 749 aa8.88□□□□□ -0.99
UBR4-206ENST00000419533 SFSWAPQ12872 951 aaKnown RBP8.88□□□□□ -0.99
UBR4-206ENST00000419533 TMEM132BQ14DG7 1078 aa8.88□□□□□ -0.99
UBR4-206ENST00000419533 TAF11Q15544 211 aa8.88□□□□□ -0.99
UBR4-206ENST00000419533 GOLGA7BQ2TAP0 167 aa8.88□□□□□ -0.99
UBR4-206ENST00000419533 ZC2HC1CQ53FD0 456 aaPredicted RBP8.88□□□□□ -0.99
UBR4-206ENST00000419533 RPAINQ86UA6 219 aa8.88□□□□□ -0.99
UBR4-206ENST00000419533 ZC3H18Q86VM9 953 aaKnown RBP8.88□□□□□ -0.99
UBR4-206ENST00000419533 SYT2Q8N9I0 419 aaPredicted RBP8.88□□□□□ -0.99
UBR4-206ENST00000419533 FOPNLQ96NB1 174 aa8.88□□□□□ -0.99
UBR4-206ENST00000419533 ASCC2Q9H1I8 757 aaPredicted RBP8.88□□□□□ -0.99
UBR4-206ENST00000419533 DPP3Q9NY33 737 aa8.88□□□□□ -0.99
UBR4-206ENST00000419533 PRG3Q9Y2Y8 225 aaPredicted RBP8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms