RNA–Protein interactions for RNA: ENST00000418436.5

RFC1-203, Transcript of replication factor C subunit 1, humanhuman

TSL 1 (best)

Gene RFC1, Length 1,255 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-203ENST00000418436 TBX10O75333 385 aa11.39□□□□□ -0.59
RFC1-203ENST00000418436 KIF20AO95235 890 aa11.39□□□□□ -0.59
RFC1-203ENST00000418436 SMC2O95347 1197 aa11.39□□□□□ -0.59
RFC1-203ENST00000418436 C1RP00736 705 aa11.39□□□□□ -0.59
RFC1-203ENST00000418436 CNPP09543 421 aaKnown RBP11.39□□□□□ -0.59
RFC1-203ENST00000418436 SCN1AP35498 2009 aa11.39□□□□□ -0.59
RFC1-203ENST00000418436 BRCC3P46736 316 aa11.39□□□□□ -0.59
RFC1-203ENST00000418436 MRPS5P82675 430 aaKnown RBP11.39□□□□□ -0.59
RFC1-203ENST00000418436 TFF2Q03403 129 aa11.39□□□□□ -0.59
RFC1-203ENST00000418436 TMEM132DQ14C87 1099 aa11.39□□□□□ -0.59
RFC1-203ENST00000418436 LEXMQ3ZCV2 418 aa11.39□□□□□ -0.59
RFC1-203ENST00000418436 COBLL1Q53SF7 1204 aa11.39□□□□□ -0.59
RFC1-203ENST00000418436 RTP2Q5QGT7 225 aa11.39□□□□□ -0.59
RFC1-203ENST00000418436 FAM171A1Q5VUB5 890 aa11.39□□□□□ -0.59
RFC1-203ENST00000418436 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.39□□□□□ -0.59
RFC1-203ENST00000418436 CBWD2Q8IUF1 395 aa11.39□□□□□ -0.59
RFC1-203ENST00000418436 SLC9A9Q8IVB4 645 aa11.39□□□□□ -0.59
RFC1-203ENST00000418436 EFCAB13Q8IY85 973 aa11.39□□□□□ -0.59
RFC1-203ENST00000418436 TMEM130Q8N3G9 435 aa11.39□□□□□ -0.59
RFC1-203ENST00000418436 GUF1Q8N442 669 aaKnown RBP11.39□□□□□ -0.59
RFC1-203ENST00000418436 XXYLT1Q8NBI6 393 aa11.39□□□□□ -0.59
RFC1-203ENST00000418436 BEST2Q8NFU1 509 aa11.39□□□□□ -0.59
RFC1-203ENST00000418436 SLC22A17Q8WUG5 538 aa11.39□□□□□ -0.59
RFC1-203ENST00000418436 PIK3R5Q8WYR1 880 aa11.39□□□□□ -0.59
RFC1-203ENST00000418436 MSLNLQ96KJ4 702 aa11.39□□□□□ -0.59
RFC1-203ENST00000418436 ASB2Q96Q27 587 aa11.39□□□□□ -0.59
RFC1-203ENST00000418436 TTPALQ9BTX7 342 aa11.39□□□□□ -0.59
RFC1-203ENST00000418436 EMILIN2Q9BXX0 1053 aa11.39□□□□□ -0.59
RFC1-203ENST00000418436 DMAC2Q9NW81 257 aa11.39□□□□□ -0.59
RFC1-203ENST00000418436 RMND1Q9NWS8 449 aa11.39□□□□□ -0.59
RFC1-203ENST00000418436 RBAKQ9NYW8 714 aaPredicted RBP11.39□□□□□ -0.59
RFC1-203ENST00000418436 CLEC1BQ9P126 229 aa11.39□□□□□ -0.59
RFC1-203ENST00000418436 FNIP2Q9P278 1114 aa11.39□□□□□ -0.59
RFC1-203ENST00000418436 TRAF3IP3Q9Y228 551 aa11.39□□□□□ -0.59
RFC1-203ENST00000418436 HCFC2Q9Y5Z7 792 aa11.39□□□□□ -0.59
RFC1-203ENST00000418436 C2CD2LO14523 706 aa11.38□□□□□ -0.59
RFC1-203ENST00000418436 TEX28O15482 410 aa11.38□□□□□ -0.59
RFC1-203ENST00000418436 KCNA5P22460 613 aa11.38□□□□□ -0.59
RFC1-203ENST00000418436 PAX3P23760 479 aa11.38□□□□□ -0.59
RFC1-203ENST00000418436 AARSP49588 968 aaKnown RBP eCLIP11.38□□□□□ -0.598e-6■■■■■ 52.4
RFC1-203ENST00000418436 GUCY2FP51841 1108 aa11.38□□□□□ -0.59
RFC1-203ENST00000418436 RBM10P98175 930 aaKnown RBP11.38□□□□□ -0.59
RFC1-203ENST00000418436 MYBPC2Q14324 1141 aa11.38□□□□□ -0.59
RFC1-203ENST00000418436 SURF1Q15526 300 aa11.38□□□□□ -0.59
RFC1-203ENST00000418436 SNRNP35Q16560 246 aaKnown RBP11.38□□□□□ -0.59
RFC1-203ENST00000418436 NFIL3Q16649 462 aa11.38□□□□□ -0.59
RFC1-203ENST00000418436 AAK1Q2M2I8 961 aa11.38□□□□□ -0.59
RFC1-203ENST00000418436 ZNF658Q5TYW1 1059 aaPredicted RBP11.38□□□□□ -0.59
RFC1-203ENST00000418436 C9orf57Q5W0N0 161 aa11.38□□□□□ -0.59
RFC1-203ENST00000418436 KIAA1841Q6NSI8 718 aa11.38□□□□□ -0.59
RFC1-203ENST00000418436 PPFIBP1Q86W92 1011 aa11.38□□□□□ -0.59
RFC1-203ENST00000418436 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.38□□□□□ -0.59
RFC1-203ENST00000418436 LNX1Q8TBB1 728 aaPredicted RBP11.38□□□□□ -0.59
RFC1-203ENST00000418436 RIN2Q8WYP3 895 aaPredicted RBP11.38□□□□□ -0.59
RFC1-203ENST00000418436 ERCC4Q92889 916 aaPredicted RBP11.38□□□□□ -0.59
RFC1-203ENST00000418436 SMARCE1Q969G3 411 aa11.38□□□□□ -0.59
RFC1-203ENST00000418436 SUSD3Q96L08 255 aa11.38□□□□□ -0.59
RFC1-203ENST00000418436 PDE11AQ9HCR9 933 aa11.38□□□□□ -0.59
RFC1-203ENST00000418436 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.38□□□□□ -0.59
RFC1-203ENST00000418436 DPP3Q9NY33 737 aa11.38□□□□□ -0.59
RFC1-203ENST00000418436 H3BQ06 376 aaPredicted RBP11.37□□□□□ -0.59
RFC1-203ENST00000418436 I3L4J1 428 aa11.37□□□□□ -0.59
RFC1-203ENST00000418436 M0QZQ0 153 aa11.37□□□□□ -0.59
RFC1-203ENST00000418436 PPEF2O14830 753 aa11.37□□□□□ -0.59
RFC1-203ENST00000418436 SYN3O14994 580 aa11.37□□□□□ -0.59
RFC1-203ENST00000418436 BMP1P13497 986 aa11.37□□□□□ -0.59
RFC1-203ENST00000418436 TKTP29401 623 aaKnown RBP11.37□□□□□ -0.59
RFC1-203ENST00000418436 CA8P35219 290 aa11.37□□□□□ -0.59
RFC1-203ENST00000418436 NDUFV1P49821 464 aa11.37□□□□□ -0.59
RFC1-203ENST00000418436 CYP2J2P51589 502 aa11.37□□□□□ -0.59
RFC1-203ENST00000418436 CLCN4P51793 760 aa11.37□□□□□ -0.59
RFC1-203ENST00000418436 CREMQ03060 361 aa11.37□□□□□ -0.59
RFC1-203ENST00000418436 MRPL58Q14197 206 aaKnown RBP11.37□□□□□ -0.59
RFC1-203ENST00000418436 ZCWPW2Q504Y3 356 aa11.37□□□□□ -0.59
RFC1-203ENST00000418436 PDXDC1Q6P996 788 aa11.37□□□□□ -0.59
RFC1-203ENST00000418436 PRSS55Q6UWB4 352 aaPredicted RBP11.37□□□□□ -0.59
RFC1-203ENST00000418436 CXorf38Q8TB03 319 aa11.37□□□□□ -0.59
RFC1-203ENST00000418436 CACTINQ8WUQ7 758 aaKnown RBP11.37□□□□□ -0.59
RFC1-203ENST00000418436 CASP10Q92851 521 aa11.37□□□□□ -0.59
RFC1-203ENST00000418436 MFSD14AQ96MC6 490 aa11.37□□□□□ -0.59
RFC1-203ENST00000418436 CLSTN3Q9BQT9 956 aa11.37□□□□□ -0.59
RFC1-203ENST00000418436 GTPBP4Q9BZE4 634 aaKnown RBP11.37□□□□□ -0.59
RFC1-203ENST00000418436 GZF1Q9H116 711 aaPredicted RBP11.37□□□□□ -0.59
RFC1-203ENST00000418436 LMBRD1Q9NUN5 540 aa11.37□□□□□ -0.59
RFC1-203ENST00000418436 INTS13Q9NVM9 706 aa11.37□□□□□ -0.59
RFC1-203ENST00000418436 BARX2Q9UMQ3 279 aaPredicted RBP11.37□□□□□ -0.59
RFC1-203ENST00000418436 MAPK8IP1Q9UQF2 711 aa11.37□□□□□ -0.59
RFC1-203ENST00000418436 NUB1Q9Y5A7 615 aa11.37□□□□□ -0.59
RFC1-203ENST00000418436 BACE2Q9Y5Z0 518 aa11.37□□□□□ -0.59
RFC1-203ENST00000418436 TSC2P49815 1807 aa11.37□□□□□ -0.59
RFC1-203ENST00000418436 PTPRJQ12913 1337 aa11.36□□□□□ -0.59
RFC1-203ENST00000418436 TCF20Q9UGU0 1960 aaKnown RBP11.36□□□□□ -0.59
RFC1-203ENST00000418436 SPTLC1O15269 473 aa11.36□□□□□ -0.59
RFC1-203ENST00000418436 CALUO43852 315 aaPredicted RBP11.36□□□□□ -0.59
RFC1-203ENST00000418436 TBC1D4O60343 1298 aa11.36□□□□□ -0.59
RFC1-203ENST00000418436 EXOC3O60645 756 aa11.36□□□□□ -0.59
RFC1-203ENST00000418436 NR3C1P04150 777 aa11.36□□□□□ -0.59
RFC1-203ENST00000418436 ADH1AP07327 375 aa11.36□□□□□ -0.59
RFC1-203ENST00000418436 SRGAP2BP0DMP2 458 aa11.36□□□□□ -0.59
RFC1-203ENST00000418436 EPCAMP16422 314 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms