RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 FSTL1Q12841 308 aa4.67□□□□□ -1.66
HMGB3P20-201ENST00000417997 DCAF17Q5H9S7 520 aaPredicted RBP4.67□□□□□ -1.66
HMGB3P20-201ENST00000417997 PITRM1Q5JRX3 1037 aa4.67□□□□□ -1.66
HMGB3P20-201ENST00000417997 ZNF627Q7L945 461 aa4.67□□□□□ -1.66
HMGB3P20-201ENST00000417997 FAM83AQ86UY5 434 aa4.67□□□□□ -1.66
HMGB3P20-201ENST00000417997 XYLT1Q86Y38 959 aa4.67□□□□□ -1.66
HMGB3P20-201ENST00000417997 RSAD2Q8WXG1 361 aa4.67□□□□□ -1.66
HMGB3P20-201ENST00000417997 ARHGAP45Q92619 1136 aa4.67□□□□□ -1.66
HMGB3P20-201ENST00000417997 HAS1Q92839 578 aa4.67□□□□□ -1.66
HMGB3P20-201ENST00000417997 CDC5LQ99459 802 aaKnown RBP4.67□□□□□ -1.66
HMGB3P20-201ENST00000417997 TTC1Q99614 292 aa4.67□□□□□ -1.66
HMGB3P20-201ENST00000417997 WNT8AQ9H1J5 351 aa4.67□□□□□ -1.66
HMGB3P20-201ENST00000417997 KCTD10Q9H3F6 313 aa4.67□□□□□ -1.66
HMGB3P20-201ENST00000417997 PRDM12Q9H4Q4 367 aa4.67□□□□□ -1.66
HMGB3P20-201ENST00000417997 IFT22Q9H7X7 185 aa4.67□□□□□ -1.66
HMGB3P20-201ENST00000417997 SPON1Q9HCB6 807 aa4.67□□□□□ -1.66
HMGB3P20-201ENST00000417997 EDARQ9UNE0 448 aa4.67□□□□□ -1.66
HMGB3P20-201ENST00000417997 TJP1Q07157 1748 aa4.66□□□□□ -1.66
HMGB3P20-201ENST00000417997 ANKRD36CQ5JPF3 1778 aa4.66□□□□□ -1.66
HMGB3P20-201ENST00000417997 RGS12O14924 1447 aa4.66□□□□□ -1.66
HMGB3P20-201ENST00000417997 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.66□□□□□ -1.66
HMGB3P20-201ENST00000417997 PRR5-ARHGAP8B1AHC4 643 aa4.66□□□□□ -1.66
HMGB3P20-201ENST00000417997 RAMP2O60895 175 aa4.66□□□□□ -1.66
HMGB3P20-201ENST00000417997 LTA4HP09960 611 aaKnown RBP4.66□□□□□ -1.66
HMGB3P20-201ENST00000417997 HSP90B1P14625 803 aaKnown RBP4.66□□□□□ -1.66
HMGB3P20-201ENST00000417997 GYPEP15421 78 aa4.66□□□□□ -1.66
HMGB3P20-201ENST00000417997 EIF2S2P20042 333 aaKnown RBP4.66□□□□□ -1.66
HMGB3P20-201ENST00000417997 EIF4A1P60842 406 aaKnown RBP4.66□□□□□ -1.66
HMGB3P20-201ENST00000417997 MRPL49Q13405 166 aaKnown RBP4.66□□□□□ -1.66
HMGB3P20-201ENST00000417997 DHCR24Q15392 516 aa4.66□□□□□ -1.66
HMGB3P20-201ENST00000417997 UGT8Q16880 541 aa4.66□□□□□ -1.66
HMGB3P20-201ENST00000417997 PLEKHG4Q58EX7 1191 aa4.66□□□□□ -1.66
HMGB3P20-201ENST00000417997 CT47A1Q5JQC4 288 aaPredicted RBP4.66□□□□□ -1.66
HMGB3P20-201ENST00000417997 MEX3CQ5U5Q3 659 aaKnown RBP4.66□□□□□ -1.66
HMGB3P20-201ENST00000417997 SLC4A10Q6U841 1118 aa4.66□□□□□ -1.66
HMGB3P20-201ENST00000417997 MRGPRGQ86SM5 289 aa4.66□□□□□ -1.66
HMGB3P20-201ENST00000417997 AMER2Q8N7J2 671 aa4.66□□□□□ -1.66
HMGB3P20-201ENST00000417997 EAF2Q96CJ1 260 aaPredicted RBP4.66□□□□□ -1.66
HMGB3P20-201ENST00000417997 TTPALQ9BTX7 342 aa4.66□□□□□ -1.66
HMGB3P20-201ENST00000417997 CPEB1Q9BZB8 566 aaKnown RBP4.66□□□□□ -1.66
HMGB3P20-201ENST00000417997 ENKD1Q9H0I2 346 aa4.66□□□□□ -1.66
HMGB3P20-201ENST00000417997 RWDD1Q9H446 243 aaPredicted RBP4.66□□□□□ -1.66
HMGB3P20-201ENST00000417997 TOPORSQ9NS56 1045 aaPredicted RBP4.66□□□□□ -1.66
HMGB3P20-201ENST00000417997 GPRC5BQ9NZH0 403 aa4.66□□□□□ -1.66
HMGB3P20-201ENST00000417997 C11orf21Q9P2W6 132 aa4.66□□□□□ -1.66
HMGB3P20-201ENST00000417997 TRPS1Q9UHF7 1281 aa4.66□□□□□ -1.66
HMGB3P20-201ENST00000417997 TMPRSS11EQ9UL52 423 aa4.66□□□□□ -1.66
HMGB3P20-201ENST00000417997 CDY2AQ9Y6F7 541 aa4.66□□□□□ -1.66
HMGB3P20-201ENST00000417997 SPATA31A6Q5VVP1 1343 aa4.66□□□□□ -1.66
HMGB3P20-201ENST00000417997 SLIT2O94813 1529 aa4.66□□□□□ -1.66
HMGB3P20-201ENST00000417997 KCPQ6ZWJ8 1503 aa4.66□□□□□ -1.66
HMGB3P20-201ENST00000417997 NHSQ6T4R5 1651 aa4.65□□□□□ -1.66
HMGB3P20-201ENST00000417997 THSD7AQ9UPZ6 1657 aa4.65□□□□□ -1.66
HMGB3P20-201ENST00000417997 OVOL3O00110 214 aa4.65□□□□□ -1.67
HMGB3P20-201ENST00000417997 KCNQ3O43525 872 aa4.65□□□□□ -1.67
HMGB3P20-201ENST00000417997 BPIP17213 487 aa4.65□□□□□ -1.67
HMGB3P20-201ENST00000417997 CCT4P50991 539 aaKnown RBP4.65□□□□□ -1.67
HMGB3P20-201ENST00000417997 WNT3AP56704 352 aa4.65□□□□□ -1.67
HMGB3P20-201ENST00000417997 CCT2P78371 535 aaKnown RBP4.65□□□□□ -1.67
HMGB3P20-201ENST00000417997 APBA1Q02410 837 aa4.65□□□□□ -1.67
HMGB3P20-201ENST00000417997 PDCD1Q15116 288 aa4.65□□□□□ -1.67
HMGB3P20-201ENST00000417997 HTR3DQ70Z44 454 aa4.65□□□□□ -1.67
HMGB3P20-201ENST00000417997 LYSMD2Q8IV50 215 aa4.65□□□□□ -1.67
HMGB3P20-201ENST00000417997 CLRN3Q8NCR9 226 aa4.65□□□□□ -1.67
HMGB3P20-201ENST00000417997 OR52N2Q8NGI0 321 aa4.65□□□□□ -1.67
HMGB3P20-201ENST00000417997 MDM1Q8TC05 714 aa4.65□□□□□ -1.67
HMGB3P20-201ENST00000417997 LSM14BQ9BX40 385 aaKnown RBP4.65□□□□□ -1.67
HMGB3P20-201ENST00000417997 TMOD3Q9NYL9 352 aa4.65□□□□□ -1.67
HMGB3P20-201ENST00000417997 DPP7Q9UHL4 492 aa4.65□□□□□ -1.67
HMGB3P20-201ENST00000417997 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.65□□□□□ -1.67
HMGB3P20-201ENST00000417997 TMA7Q9Y2S6 64 aaKnown RBP4.65□□□□□ -1.67
HMGB3P20-201ENST00000417997 HEG1Q9ULI3 1381 aa4.65□□□□□ -1.67
HMGB3P20-201ENST00000417997 CICQ96RK0 1608 aaPredicted RBP4.64□□□□□ -1.67
HMGB3P20-201ENST00000417997 ERVV-2B6SEH9 535 aa4.64□□□□□ -1.67
HMGB3P20-201ENST00000417997 TRIM24O15164 1050 aa4.64□□□□□ -1.67
HMGB3P20-201ENST00000417997 ZEB2O60315 1214 aa4.64□□□□□ -1.67
HMGB3P20-201ENST00000417997 ULK1O75385 1050 aa4.64□□□□□ -1.67
HMGB3P20-201ENST00000417997 ITGA10O75578 1167 aa4.64□□□□□ -1.67
HMGB3P20-201ENST00000417997 DDX58O95786 925 aaKnown RBP4.64□□□□□ -1.67
HMGB3P20-201ENST00000417997 APOBEC3AP31941 199 aaPredicted RBP4.64□□□□□ -1.67
HMGB3P20-201ENST00000417997 SOX5P35711 763 aa4.64□□□□□ -1.67
HMGB3P20-201ENST00000417997 SESN3P58005 492 aa4.64□□□□□ -1.67
HMGB3P20-201ENST00000417997 CDK17Q00537 523 aa4.64□□□□□ -1.67
HMGB3P20-201ENST00000417997 SLC39A6Q13433 755 aa4.64□□□□□ -1.67
HMGB3P20-201ENST00000417997 VPS72Q15906 364 aa4.64□□□□□ -1.67
HMGB3P20-201ENST00000417997 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.64□□□□□ -1.67
HMGB3P20-201ENST00000417997 TIGD2Q4W5G0 525 aa4.64□□□□□ -1.67
HMGB3P20-201ENST00000417997 NAIF1Q69YI7 327 aaPredicted RBP4.64□□□□□ -1.67
HMGB3P20-201ENST00000417997 LAIR1Q6GTX8 287 aa4.64□□□□□ -1.67
HMGB3P20-201ENST00000417997 ZNF790Q6PG37 636 aa4.64□□□□□ -1.67
HMGB3P20-201ENST00000417997 KCNV1Q6PIU1 500 aa4.64□□□□□ -1.67
HMGB3P20-201ENST00000417997 ABHD15Q6UXT9 468 aa4.64□□□□□ -1.67
HMGB3P20-201ENST00000417997 LDLRAD3Q86YD5 345 aa4.64□□□□□ -1.67
HMGB3P20-201ENST00000417997 THNSL2Q86YJ6 484 aa4.64□□□□□ -1.67
HMGB3P20-201ENST00000417997 PROKR1Q8TCW9 393 aa4.64□□□□□ -1.67
HMGB3P20-201ENST00000417997 TGFBRAP1Q8WUH2 860 aa4.64□□□□□ -1.67
HMGB3P20-201ENST00000417997 NDC1Q9BTX1 674 aa4.64□□□□□ -1.67
HMGB3P20-201ENST00000417997 ZNF768Q9H5H4 540 aaKnown RBP4.64□□□□□ -1.67
HMGB3P20-201ENST00000417997 TRPM5Q9NZQ8 1165 aa4.64□□□□□ -1.67
HMGB3P20-201ENST00000417997 CHPF2Q9P2E5 772 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms