RNA–Protein interactions for RNA: ENST00000416529.5

RBM39-209, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 594 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-209ENST00000416529 THP07101 528 aa8.33□□□□□ -1.08
RBM39-209ENST00000416529 MYBP10242 640 aa8.33□□□□□ -1.08
RBM39-209ENST00000416529 FOSL2P15408 326 aa8.33□□□□□ -1.08
RBM39-209ENST00000416529 PRCPP42785 496 aa8.33□□□□□ -1.08
RBM39-209ENST00000416529 CLDN10P78369 228 aa8.33□□□□□ -1.08
RBM39-209ENST00000416529 CETN1Q12798 172 aa8.33□□□□□ -1.08
RBM39-209ENST00000416529 ADAM9Q13443 819 aa8.33□□□□□ -1.08
RBM39-209ENST00000416529 NOMO2Q5JPE7 1267 aa8.33□□□□□ -1.08
RBM39-209ENST00000416529 PDXDC1Q6P996 788 aa8.33□□□□□ -1.08
RBM39-209ENST00000416529 FRMD5Q7Z6J6 570 aa8.33□□□□□ -1.08
RBM39-209ENST00000416529 RNF135Q8IUD6 432 aa8.33□□□□□ -1.08
RBM39-209ENST00000416529 BRSK2Q8IWQ3 736 aa8.33□□□□□ -1.08
RBM39-209ENST00000416529 TTC39CQ8N584 583 aa8.33□□□□□ -1.08
RBM39-209ENST00000416529 ANKRD20A12PQ8NF67 263 aa8.33□□□□□ -1.08
RBM39-209ENST00000416529 CLP1Q92989 425 aaKnown RBP8.33□□□□□ -1.08
RBM39-209ENST00000416529 ZBTB10Q96DT7 871 aa8.33□□□□□ -1.08
RBM39-209ENST00000416529 MFSD14AQ96MC6 490 aa8.33□□□□□ -1.08
RBM39-209ENST00000416529 RPS6KC1Q96S38 1066 aa8.33□□□□□ -1.08
RBM39-209ENST00000416529 CDX2Q99626 313 aaPredicted RBP8.33□□□□□ -1.08
RBM39-209ENST00000416529 DNAI2Q9GZS0 605 aa8.33□□□□□ -1.08
RBM39-209ENST00000416529 LMAN2LQ9H0V9 348 aa8.33□□□□□ -1.08
RBM39-209ENST00000416529 THAP9Q9H5L6 903 aa8.33□□□□□ -1.08
RBM39-209ENST00000416529 RC3H2Q9HBD1 1191 aaKnown RBP8.33□□□□□ -1.08
RBM39-209ENST00000416529 RAB6BQ9NRW1 208 aa8.33□□□□□ -1.08
RBM39-209ENST00000416529 LMCD1Q9NZU5 365 aa8.33□□□□□ -1.08
RBM39-209ENST00000416529 UBQLN1Q9UMX0 589 aaKnown RBP8.33□□□□□ -1.08
RBM39-209ENST00000416529 LZTS1Q9Y250 596 aa8.33□□□□□ -1.08
RBM39-209ENST00000416529 SSX2IPQ9Y2D8 614 aa8.33□□□□□ -1.08
RBM39-209ENST00000416529 C5orf67F2Z3F1 127 aa8.32□□□□□ -1.08
RBM39-209ENST00000416529 B4GALT5O43286 388 aa8.32□□□□□ -1.08
RBM39-209ENST00000416529 TRAPPC3O43617 180 aa8.32□□□□□ -1.08
RBM39-209ENST00000416529 FAM189A1O60320 539 aa8.32□□□□□ -1.08
RBM39-209ENST00000416529 EXOC3O60645 756 aa8.32□□□□□ -1.08
RBM39-209ENST00000416529 OFD1O75665 1012 aa8.32□□□□□ -1.08
RBM39-209ENST00000416529 NPTXRO95502 500 aa8.32□□□□□ -1.08
RBM39-209ENST00000416529 STAU1O95793 577 aaKnown RBP8.32□□□□□ -1.08
RBM39-209ENST00000416529 IL2RAP01589 272 aa8.32□□□□□ -1.08
RBM39-209ENST00000416529 NR3C1P04150 777 aa8.32□□□□□ -1.08
RBM39-209ENST00000416529 ALDH2P05091 517 aa8.32□□□□□ -1.08
RBM39-209ENST00000416529 EPB41P11171 864 aaKnown RBP8.32□□□□□ -1.08
RBM39-209ENST00000416529 KRT13P13646 458 aa8.32□□□□□ -1.08
RBM39-209ENST00000416529 ATF7P17544 494 aaPredicted RBP8.32□□□□□ -1.08
RBM39-209ENST00000416529 EEF1GP26641 437 aaKnown RBP8.32□□□□□ -1.08
RBM39-209ENST00000416529 ADSSP30520 456 aa8.32□□□□□ -1.08
RBM39-209ENST00000416529 LRPAP1P30533 357 aa8.32□□□□□ -1.08
RBM39-209ENST00000416529 SOX11P35716 441 aa8.32□□□□□ -1.08
RBM39-209ENST00000416529 MATR3P43243 847 aaKnown RBP eCLIP8.32□□□□□ -1.08
RBM39-209ENST00000416529 CASP5P51878 434 aa8.32□□□□□ -1.08
RBM39-209ENST00000416529 TPM4P67936 248 aa8.32□□□□□ -1.08
RBM39-209ENST00000416529 CREMQ03060 361 aa8.32□□□□□ -1.08
RBM39-209ENST00000416529 TUSC3Q13454 348 aa8.32□□□□□ -1.08
RBM39-209ENST00000416529 PSMD6Q15008 389 aa8.32□□□□□ -1.08
RBM39-209ENST00000416529 SNRNP35Q16560 246 aaKnown RBP8.32□□□□□ -1.08
RBM39-209ENST00000416529 ZC2HC1CQ53FD0 456 aaPredicted RBP8.32□□□□□ -1.08
RBM39-209ENST00000416529 SPATA1Q5VX52 437 aa8.32□□□□□ -1.08
RBM39-209ENST00000416529 AGMOQ6ZNB7 445 aa8.32□□□□□ -1.08
RBM39-209ENST00000416529 OTOP2Q7RTS6 562 aa8.32□□□□□ -1.08
RBM39-209ENST00000416529 WDR49Q8IV35 697 aa8.32□□□□□ -1.08
RBM39-209ENST00000416529 GRAMD1CQ8IYS0 662 aa8.32□□□□□ -1.08
RBM39-209ENST00000416529 BEND7Q8N7W2 519 aaPredicted RBP8.32□□□□□ -1.08
RBM39-209ENST00000416529 SMG8Q8ND04 991 aaKnown RBP8.32□□□□□ -1.08
RBM39-209ENST00000416529 PPM1EQ8WY54 764 aa8.32□□□□□ -1.08
RBM39-209ENST00000416529 TAF4BQ92750 862 aa8.32□□□□□ -1.08
RBM39-209ENST00000416529 SNX27Q96L92 541 aa8.32□□□□□ -1.08
RBM39-209ENST00000416529 FAM193BQ96PV7 902 aaPredicted RBP8.32□□□□□ -1.08
RBM39-209ENST00000416529 FNBP1Q96RU3 617 aa8.32□□□□□ -1.08
RBM39-209ENST00000416529 YME1L1Q96TA2 773 aa8.32□□□□□ -1.08
RBM39-209ENST00000416529 KIFC3Q9BVG8 833 aa8.32□□□□□ -1.08
RBM39-209ENST00000416529 HSPBP1Q9NZL4 362 aa8.32□□□□□ -1.08
RBM39-209ENST00000416529 R3HCC1Q9Y3T6 440 aaKnown RBP8.32□□□□□ -1.08
RBM39-209ENST00000416529 PCDHB12Q9Y5F1 795 aa8.32□□□□□ -1.08
RBM39-209ENST00000416529 MYO9BQ13459 2157 aa8.32□□□□□ -1.08
RBM39-209ENST00000416529 RALGAPA2Q2PPJ7 1873 aa8.32□□□□□ -1.08
RBM39-209ENST00000416529 GTPBP10A4D1E9 387 aaKnown RBP8.31□□□□□ -1.08
RBM39-209ENST00000416529 MGEA5O60502 916 aa8.31□□□□□ -1.08
RBM39-209ENST00000416529 TPM2P07951 284 aa8.31□□□□□ -1.08
RBM39-209ENST00000416529 NR2F2P24468 414 aa8.31□□□□□ -1.08
RBM39-209ENST00000416529 ATICP31939 592 aa8.31□□□□□ -1.08
RBM39-209ENST00000416529 HOXD13P35453 343 aa8.31□□□□□ -1.08
RBM39-209ENST00000416529 ALDH7A1P49419 539 aaKnown RBP8.31□□□□□ -1.08
RBM39-209ENST00000416529 ZNF445P59923 1031 aa8.31□□□□□ -1.08
RBM39-209ENST00000416529 PLCB3Q01970 1234 aa8.31□□□□□ -1.08
RBM39-209ENST00000416529 DSC1Q08554 894 aa8.31□□□□□ -1.08
RBM39-209ENST00000416529 SHHQ15465 462 aa8.31□□□□□ -1.08
RBM39-209ENST00000416529 ZBTB6Q15916 424 aa8.31□□□□□ -1.08
RBM39-209ENST00000416529 CAMK4Q16566 473 aa8.31□□□□□ -1.08
RBM39-209ENST00000416529 DUOXA2Q1HG44 320 aa8.31□□□□□ -1.08
RBM39-209ENST00000416529 MAP7D1Q3KQU3 841 aa8.31□□□□□ -1.08
RBM39-209ENST00000416529 EFHC2Q5JST6 749 aa8.31□□□□□ -1.08
RBM39-209ENST00000416529 EEF1DP3Q658K8 133 aa8.31□□□□□ -1.08
RBM39-209ENST00000416529 TTI2Q6NXR4 508 aa8.31□□□□□ -1.08
RBM39-209ENST00000416529 CAVIN1Q6NZI2 390 aaKnown RBP8.31□□□□□ -1.08
RBM39-209ENST00000416529 SLC39A4Q6P5W5 647 aa8.31□□□□□ -1.08
RBM39-209ENST00000416529 DCLRE1AQ6PJP8 1040 aa8.31□□□□□ -1.08
RBM39-209ENST00000416529 RTL10Q7L3V2 364 aa8.31□□□□□ -1.08
RBM39-209ENST00000416529 DPH6Q7L8W6 267 aa8.31□□□□□ -1.08
RBM39-209ENST00000416529 FIBCD1Q8N539 461 aa8.31□□□□□ -1.08
RBM39-209ENST00000416529 CSGALNACT2Q8N6G5 542 aa8.31□□□□□ -1.08
RBM39-209ENST00000416529 LRRC52Q8N7C0 313 aa8.31□□□□□ -1.08
RBM39-209ENST00000416529 BEST2Q8NFU1 509 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms