RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 SPECC1LQ69YQ0 1117 aa15.61■□□□□ 0.09
SGCE-202ENST00000415788 ZNF280BQ86YH2 543 aa15.61■□□□□ 0.09
SGCE-202ENST00000415788 OR5B17Q8NGF7 314 aa15.61■□□□□ 0.09
SGCE-202ENST00000415788 CLP1Q92989 425 aaKnown RBP15.61■□□□□ 0.09
SGCE-202ENST00000415788 C18orf25Q96B23 403 aaPredicted RBP15.61■□□□□ 0.09
SGCE-202ENST00000415788 CWH43Q9H720 699 aa15.61■□□□□ 0.09
SGCE-202ENST00000415788 TMEM8AQ9HCN3 771 aa15.61■□□□□ 0.09
SGCE-202ENST00000415788 TUBGCP4Q9UGJ1 667 aa15.61■□□□□ 0.09
SGCE-202ENST00000415788 MRPL42Q9Y6G3 142 aaKnown RBP15.61■□□□□ 0.09
SGCE-202ENST00000415788 MAP2K7O14733 419 aa15.6■□□□□ 0.09
SGCE-202ENST00000415788 PMM2O15305 246 aa15.6■□□□□ 0.09
SGCE-202ENST00000415788 ZC3H11AO75152 810 aaKnown RBP eCLIP15.6■□□□□ 0.09
SGCE-202ENST00000415788 ALDH2P05091 517 aa15.6■□□□□ 0.09
SGCE-202ENST00000415788 TRIM49P0CI25 452 aa15.6■□□□□ 0.09
SGCE-202ENST00000415788 TRIM49CP0CI26 452 aa15.6■□□□□ 0.09
SGCE-202ENST00000415788 SOX4Q06945 474 aaPredicted RBP15.6■□□□□ 0.09
SGCE-202ENST00000415788 ZSCAN26Q16670 478 aa15.6■□□□□ 0.09
SGCE-202ENST00000415788 LRIT3Q3SXY7 679 aa15.6■□□□□ 0.09
SGCE-202ENST00000415788 ZACNQ401N2 412 aa15.6■□□□□ 0.09
SGCE-202ENST00000415788 HSP90AA4PQ58FG1 418 aa15.6■□□□□ 0.09
SGCE-202ENST00000415788 SPOUT1Q5T280 376 aaKnown RBP15.6■□□□□ 0.09
SGCE-202ENST00000415788 LMBRD2Q68DH5 695 aaPredicted RBP15.6■□□□□ 0.09
SGCE-202ENST00000415788 KRT39Q6A163 491 aa15.6■□□□□ 0.09
SGCE-202ENST00000415788 TUBGCP2Q9BSJ2 902 aa15.6■□□□□ 0.09
SGCE-202ENST00000415788 PBX4Q9BYU1 374 aa15.6■□□□□ 0.09
SGCE-202ENST00000415788 COLQQ9Y215 455 aaPredicted RBP15.6■□□□□ 0.09
SGCE-202ENST00000415788 CITO14578 2027 aa15.6■□□□□ 0.09
SGCE-202ENST00000415788 PTPRSQ13332 1948 aa15.6■□□□□ 0.09
SGCE-202ENST00000415788 P4HA2O15460 535 aa15.59■□□□□ 0.09
SGCE-202ENST00000415788 C4BPAP04003 597 aaKnown RBP15.59■□□□□ 0.09
SGCE-202ENST00000415788 PAX3P23760 479 aa15.59■□□□□ 0.09
SGCE-202ENST00000415788 MXI1P50539 228 aa15.59■□□□□ 0.09
SGCE-202ENST00000415788 PPP3CAQ08209 521 aa15.59■□□□□ 0.09
SGCE-202ENST00000415788 UPP1Q16831 310 aa15.59■□□□□ 0.09
SGCE-202ENST00000415788 C15orf39Q6ZRI6 1047 aa15.59■□□□□ 0.09
SGCE-202ENST00000415788 SV2AQ7L0J3 742 aa15.59■□□□□ 0.09
SGCE-202ENST00000415788 TRAPPC11Q7Z392 1133 aa15.59■□□□□ 0.09
SGCE-202ENST00000415788 CEP112Q8N8E3 955 aa15.59■□□□□ 0.09
SGCE-202ENST00000415788 C1orf127Q8N9H9 656 aa15.59■□□□□ 0.09
SGCE-202ENST00000415788 TC2NQ8N9U0 490 aa15.59■□□□□ 0.09
SGCE-202ENST00000415788 ZNF516Q92618 1163 aa15.59■□□□□ 0.09
SGCE-202ENST00000415788 ZNF558Q96NG5 402 aa15.59■□□□□ 0.09
SGCE-202ENST00000415788 SAMD11Q96NU1 681 aa15.59■□□□□ 0.09
SGCE-202ENST00000415788 WDR24Q96S15 920 aa15.59■□□□□ 0.09
SGCE-202ENST00000415788 COLEC11Q9BWP8 271 aa15.59■□□□□ 0.09
SGCE-202ENST00000415788 NAA15Q9BXJ9 866 aaKnown RBP15.59■□□□□ 0.09
SGCE-202ENST00000415788 CEP290O15078 2479 aa15.59■□□□□ 0.09
SGCE-202ENST00000415788 ANO9A1A5B4 782 aa15.59■□□□□ 0.09
SGCE-202ENST00000415788 LINC01553A4QN01 128 aa15.59■□□□□ 0.09
SGCE-202ENST00000415788 CASTOR2A6NHX0 329 aa15.59■□□□□ 0.09
SGCE-202ENST00000415788 LRRC10BA6NIK2 292 aa15.59■□□□□ 0.09
SGCE-202ENST00000415788 TMEM189-UBE2V1I3L0A0 370 aa15.59■□□□□ 0.09
SGCE-202ENST00000415788 PHACTR2O75167 634 aa15.59■□□□□ 0.09
SGCE-202ENST00000415788 AFPP02771 609 aaKnown RBP15.59■□□□□ 0.09
SGCE-202ENST00000415788 TUBBP07437 444 aa15.59■□□□□ 0.09
SGCE-202ENST00000415788 GALTP07902 379 aa15.59■□□□□ 0.09
SGCE-202ENST00000415788 PPM1AP35813 382 aa15.59■□□□□ 0.09
SGCE-202ENST00000415788 PNPLA4P41247 253 aa15.59■□□□□ 0.09
SGCE-202ENST00000415788 OR1G1P47890 313 aa15.59■□□□□ 0.09
SGCE-202ENST00000415788 GCLMP48507 274 aa15.59■□□□□ 0.09
SGCE-202ENST00000415788 BCAR1P56945 870 aa15.59■□□□□ 0.09
SGCE-202ENST00000415788 RBP5P82980 135 aa15.59■□□□□ 0.09
SGCE-202ENST00000415788 CETN1Q12798 172 aa15.59■□□□□ 0.09
SGCE-202ENST00000415788 KCNH2Q12809 1159 aa15.59■□□□□ 0.09
SGCE-202ENST00000415788 BIRC3Q13489 604 aa15.59■□□□□ 0.09
SGCE-202ENST00000415788 LONRF2Q1L5Z9 754 aa15.59■□□□□ 0.09
SGCE-202ENST00000415788 C9orf57Q5W0N0 161 aa15.59■□□□□ 0.09
SGCE-202ENST00000415788 DCLRE1AQ6PJP8 1040 aa15.59■□□□□ 0.09
SGCE-202ENST00000415788 IPO4Q8TEX9 1081 aaKnown RBP15.59■□□□□ 0.09
SGCE-202ENST00000415788 DNAJB4Q9UDY4 337 aa15.59■□□□□ 0.09
SGCE-202ENST00000415788 LIMA1Q9UHB6 759 aaKnown RBP15.59■□□□□ 0.09
SGCE-202ENST00000415788 FAN1Q9Y2M0 1017 aa15.59■□□□□ 0.09
SGCE-202ENST00000415788 PCDHB12Q9Y5F1 795 aa15.59■□□□□ 0.09
SGCE-202ENST00000415788 LCHNA4D1U4 455 aa15.58■□□□□ 0.08
SGCE-202ENST00000415788 PODXLO00592 558 aa15.58■□□□□ 0.08
SGCE-202ENST00000415788 PIRO00625 290 aa15.58■□□□□ 0.08
SGCE-202ENST00000415788 ERLIN1O75477 346 aa15.58■□□□□ 0.08
SGCE-202ENST00000415788 ITGB3P05106 788 aa15.58■□□□□ 0.08
SGCE-202ENST00000415788 CA3P07451 260 aa15.58■□□□□ 0.08
SGCE-202ENST00000415788 IVLP07476 585 aa15.58■□□□□ 0.08
SGCE-202ENST00000415788 CCDC175P0C221 793 aa15.58■□□□□ 0.08
SGCE-202ENST00000415788 FMO5P49326 533 aa15.58■□□□□ 0.08
SGCE-202ENST00000415788 KRT31Q15323 416 aa15.58■□□□□ 0.08
SGCE-202ENST00000415788 TDRD10Q5VZ19 366 aaKnown RBP15.58■□□□□ 0.08
SGCE-202ENST00000415788 KCNT2Q6UVM3 1135 aa15.58■□□□□ 0.08
SGCE-202ENST00000415788 LRRC52Q8N7C0 313 aa15.58■□□□□ 0.08
SGCE-202ENST00000415788 COLGALT1Q8NBJ5 622 aa15.58■□□□□ 0.08
SGCE-202ENST00000415788 ZNF560Q96MR9 790 aa15.58■□□□□ 0.08
SGCE-202ENST00000415788 PANX2Q96RD6 677 aa15.58■□□□□ 0.08
SGCE-202ENST00000415788 PLVAPQ9BX97 442 aa15.58■□□□□ 0.08
SGCE-202ENST00000415788 GOLGA2P5Q9HBQ8 144 aa15.58■□□□□ 0.08
SGCE-202ENST00000415788 HCSTQ9UBK5 93 aa15.58■□□□□ 0.08
SGCE-202ENST00000415788 FNDC1Q4ZHG4 1894 aaPredicted RBP15.58■□□□□ 0.08
SGCE-202ENST00000415788 NRP1O14786 923 aa15.57■□□□□ 0.08
SGCE-202ENST00000415788 B4GALT3O60512 393 aa15.57■□□□□ 0.08
SGCE-202ENST00000415788 B3GAT3O94766 335 aa15.57■□□□□ 0.08
SGCE-202ENST00000415788 KRT19P08727 400 aa15.57■□□□□ 0.08
SGCE-202ENST00000415788 MYOGP15173 224 aa15.57■□□□□ 0.08
SGCE-202ENST00000415788 SLC11A1P49279 550 aa15.57■□□□□ 0.08
SGCE-202ENST00000415788 CLCNKBP51801 687 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms