RNA–Protein interactions for RNA: ENST00000415749.1

EPHA4-204, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-204ENST00000415749 MXD3Q9BW11 206 aa7.14□□□□□ -1.27
EPHA4-204ENST00000415749 GTPBP4Q9BZE4 634 aaKnown RBP7.14□□□□□ -1.27
EPHA4-204ENST00000415749 ZDHHC5Q9C0B5 715 aa7.14□□□□□ -1.27
EPHA4-204ENST00000415749 PCDHGB6Q9Y5F9 930 aa7.14□□□□□ -1.27
EPHA4-204ENST00000415749 PCDHA5Q9Y5H7 936 aa7.14□□□□□ -1.27
EPHA4-204ENST00000415749 SCINQ9Y6U3 715 aa7.14□□□□□ -1.27
EPHA4-204ENST00000415749 COL3A1P02461 1466 aaPredicted RBP7.13□□□□□ -1.27
EPHA4-204ENST00000415749 ZNF609O15014 1411 aa7.13□□□□□ -1.27
EPHA4-204ENST00000415749 FOXP2O15409 715 aa7.13□□□□□ -1.27
EPHA4-204ENST00000415749 PAX4O43316 350 aa7.13□□□□□ -1.27
EPHA4-204ENST00000415749 SASH1O94885 1247 aa7.13□□□□□ -1.27
EPHA4-204ENST00000415749 FARP2O94887 1054 aaPredicted RBP7.13□□□□□ -1.27
EPHA4-204ENST00000415749 LRG1P02750 347 aa7.13□□□□□ -1.27
EPHA4-204ENST00000415749 POU2F2P09086 479 aa7.13□□□□□ -1.27
EPHA4-204ENST00000415749 STAT5AP42229 794 aa7.13□□□□□ -1.27
EPHA4-204ENST00000415749 FNTBP49356 437 aa7.13□□□□□ -1.27
EPHA4-204ENST00000415749 MMP14P50281 582 aa7.13□□□□□ -1.27
EPHA4-204ENST00000415749 RENBPP51606 427 aa7.13□□□□□ -1.27
EPHA4-204ENST00000415749 TRIM14Q14142 442 aa7.13□□□□□ -1.27
EPHA4-204ENST00000415749 KIAA0753Q2KHM9 967 aa7.13□□□□□ -1.27
EPHA4-204ENST00000415749 SUPT20HL1Q3ZLR7 823 aa7.13□□□□□ -1.27
EPHA4-204ENST00000415749 DACT2Q5SW24 774 aa7.13□□□□□ -1.27
EPHA4-204ENST00000415749 OVCH2Q7RTZ1 564 aa7.13□□□□□ -1.27
EPHA4-204ENST00000415749 B3GNT8Q7Z7M8 397 aa7.13□□□□□ -1.27
EPHA4-204ENST00000415749 MYLK4Q86YV6 388 aaPredicted RBP7.13□□□□□ -1.27
EPHA4-204ENST00000415749 ZZZ3Q8IYH5 903 aa7.13□□□□□ -1.27
EPHA4-204ENST00000415749 PPP1R35Q8TAP8 253 aa7.13□□□□□ -1.27
EPHA4-204ENST00000415749 FAM84AQ96KN4 292 aa7.13□□□□□ -1.27
EPHA4-204ENST00000415749 TBCBQ99426 244 aa7.13□□□□□ -1.27
EPHA4-204ENST00000415749 CDC5LQ99459 802 aaKnown RBP7.13□□□□□ -1.27
EPHA4-204ENST00000415749 DEFB129Q9H1M3 183 aa7.13□□□□□ -1.27
EPHA4-204ENST00000415749 RSAD1Q9HA92 442 aa7.13□□□□□ -1.27
EPHA4-204ENST00000415749 TRMT13Q9NUP7 481 aaKnown RBP7.13□□□□□ -1.27
EPHA4-204ENST00000415749 DNAJC28Q9NX36 388 aa7.13□□□□□ -1.27
EPHA4-204ENST00000415749 LAMB2P55268 1798 aa7.13□□□□□ -1.27
EPHA4-204ENST00000415749 ACOT7O00154 380 aa7.12□□□□□ -1.27
EPHA4-204ENST00000415749 KDM1AO60341 852 aa7.12□□□□□ -1.27
EPHA4-204ENST00000415749 HRGP04196 525 aa7.12□□□□□ -1.27
EPHA4-204ENST00000415749 HSP90AA1P07900 732 aaKnown RBP7.12□□□□□ -1.27
EPHA4-204ENST00000415749 ENO2P09104 434 aaPredicted RBP7.12□□□□□ -1.27
EPHA4-204ENST00000415749 TMEM253P0C7T8 217 aa7.12□□□□□ -1.27
EPHA4-204ENST00000415749 C5AR1P21730 350 aa7.12□□□□□ -1.27
EPHA4-204ENST00000415749 NCKAP1LP55160 1127 aa7.12□□□□□ -1.27
EPHA4-204ENST00000415749 DLG4P78352 724 aa7.12□□□□□ -1.27
EPHA4-204ENST00000415749 SIM2Q14190 667 aaPredicted RBP7.12□□□□□ -1.27
EPHA4-204ENST00000415749 KIF22Q14807 665 aa7.12□□□□□ -1.27
EPHA4-204ENST00000415749 VASNQ6EMK4 673 aa7.12□□□□□ -1.27
EPHA4-204ENST00000415749 FSTL4Q6MZW2 842 aa7.12□□□□□ -1.27
EPHA4-204ENST00000415749 NKAPQ8N5F7 415 aaKnown RBP7.12□□□□□ -1.27
EPHA4-204ENST00000415749 DEFB123Q8N688 67 aa7.12□□□□□ -1.27
EPHA4-204ENST00000415749 PGBD4Q96DM1 585 aa7.12□□□□□ -1.27
EPHA4-204ENST00000415749 SGCZQ96LD1 299 aa7.12□□□□□ -1.27
EPHA4-204ENST00000415749 PPP1R16BQ96T49 567 aa7.12□□□□□ -1.27
EPHA4-204ENST00000415749 MAP3K14Q99558 947 aa7.12□□□□□ -1.27
EPHA4-204ENST00000415749 SLC38A3Q99624 504 aa7.12□□□□□ -1.27
EPHA4-204ENST00000415749 ISCA1Q9BUE6 129 aa7.12□□□□□ -1.27
EPHA4-204ENST00000415749 ARHGAP28Q9P2N2 729 aa7.12□□□□□ -1.27
EPHA4-204ENST00000415749 STAP2Q9UGK3 403 aa7.12□□□□□ -1.27
EPHA4-204ENST00000415749 STXBP5LQ9Y2K9 1186 aa7.12□□□□□ -1.27
EPHA4-204ENST00000415749 DGKBQ9Y6T7 804 aa7.12□□□□□ -1.27
EPHA4-204ENST00000415749 HTTP42858 3142 aa7.11□□□□□ -1.27
EPHA4-204ENST00000415749 XDHP47989 1333 aa7.11□□□□□ -1.27
EPHA4-204ENST00000415749 MYO3BQ8WXR4 1341 aa7.11□□□□□ -1.27
EPHA4-204ENST00000415749 DVL2O14641 736 aa7.11□□□□□ -1.27
EPHA4-204ENST00000415749 C8BP07358 591 aa7.11□□□□□ -1.27
EPHA4-204ENST00000415749 GLDCP23378 1020 aa7.11□□□□□ -1.27
EPHA4-204ENST00000415749 ADKP55263 362 aaKnown RBP7.11□□□□□ -1.27
EPHA4-204ENST00000415749 PRMT2P55345 433 aa7.11□□□□□ -1.27
EPHA4-204ENST00000415749 DBPQ10586 325 aaPredicted RBP7.11□□□□□ -1.27
EPHA4-204ENST00000415749 SEC23AQ15436 765 aa7.11□□□□□ -1.27
EPHA4-204ENST00000415749 CR1LQ2VPA4 569 aa7.11□□□□□ -1.27
EPHA4-204ENST00000415749 XP32Q5T750 250 aa7.11□□□□□ -1.27
EPHA4-204ENST00000415749 STRIP1Q5VSL9 837 aa7.11□□□□□ -1.27
EPHA4-204ENST00000415749 CD276Q5ZPR3 534 aa7.11□□□□□ -1.27
EPHA4-204ENST00000415749 TTLL5Q6EMB2 1281 aa7.11□□□□□ -1.27
EPHA4-204ENST00000415749 MMS22LQ6ZRQ5 1243 aa7.11□□□□□ -1.27
EPHA4-204ENST00000415749 FRMD7Q6ZUT3 714 aa7.11□□□□□ -1.27
EPHA4-204ENST00000415749 SYDE1Q6ZW31 735 aaPredicted RBP7.11□□□□□ -1.27
EPHA4-204ENST00000415749 UBE2Q1Q7Z7E8 422 aa7.11□□□□□ -1.27
EPHA4-204ENST00000415749 FAM9BQ8IZU0 186 aa7.11□□□□□ -1.27
EPHA4-204ENST00000415749 CAMKK1Q8N5S9 505 aa7.11□□□□□ -1.27
EPHA4-204ENST00000415749 PLBD2Q8NHP8 589 aa7.11□□□□□ -1.27
EPHA4-204ENST00000415749 SMARCC2Q8TAQ2 1214 aa7.11□□□□□ -1.27
EPHA4-204ENST00000415749 ZBED3Q96IU2 234 aaPredicted RBP7.11□□□□□ -1.27
EPHA4-204ENST00000415749 TMEM209Q96SK2 561 aa7.11□□□□□ -1.27
EPHA4-204ENST00000415749 APOL5Q9BWW9 433 aa7.11□□□□□ -1.27
EPHA4-204ENST00000415749 SGPP1Q9BX95 441 aa7.11□□□□□ -1.27
EPHA4-204ENST00000415749 KCNK12Q9HB15 430 aa7.11□□□□□ -1.27
EPHA4-204ENST00000415749 TSPYL4Q9UJ04 414 aa7.11□□□□□ -1.27
EPHA4-204ENST00000415749 PLA2G2DQ9UNK4 145 aa7.11□□□□□ -1.27
EPHA4-204ENST00000415749 RNF114Q9Y508 228 aa7.11□□□□□ -1.27
EPHA4-204ENST00000415749 ASB1Q9Y576 335 aa7.11□□□□□ -1.27
EPHA4-204ENST00000415749 PCDHGB3Q9Y5G1 929 aa7.11□□□□□ -1.27
EPHA4-204ENST00000415749 CENPFP49454 3210 aa7.11□□□□□ -1.27
EPHA4-204ENST00000415749 COL6A3P12111 3177 aa7.11□□□□□ -1.27
EPHA4-204ENST00000415749 LRRC37AA6NMS7 1700 aa7.1□□□□□ -1.27
EPHA4-204ENST00000415749 A0A0U1RQG5 324 aaPredicted RBP7.1□□□□□ -1.27
EPHA4-204ENST00000415749 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.1□□□□□ -1.27
EPHA4-204ENST00000415749 PRRT4C9JH25 899 aa7.1□□□□□ -1.27
EPHA4-204ENST00000415749 TUSC2O75896 110 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms