RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 TBCCD1Q9NVR7 557 aa4.72□□□□□ -1.65
HMGB3P23-201ENST00000414981 HSFX1Q9UBD0 423 aa4.72□□□□□ -1.65
HMGB3P23-201ENST00000414981 MROH2BQ7Z745 1585 aa4.72□□□□□ -1.65
HMGB3P23-201ENST00000414981 GOLGA3Q08378 1498 aa4.71□□□□□ -1.66
HMGB3P23-201ENST00000414981 SLC16A6O15403 523 aa4.71□□□□□ -1.66
HMGB3P23-201ENST00000414981 AGFG2O95081 481 aa4.71□□□□□ -1.66
HMGB3P23-201ENST00000414981 POU2F2P09086 479 aa4.71□□□□□ -1.66
HMGB3P23-201ENST00000414981 FTH1P19P0C7X4 201 aa4.71□□□□□ -1.66
HMGB3P23-201ENST00000414981 MALP21145 153 aa4.71□□□□□ -1.66
HMGB3P23-201ENST00000414981 AKAP5P24588 427 aa4.71□□□□□ -1.66
HMGB3P23-201ENST00000414981 FXR1P51114 621 aaKnown RBP eCLIP4.71□□□□□ -1.66
HMGB3P23-201ENST00000414981 VAV2P52735 878 aa4.71□□□□□ -1.66
HMGB3P23-201ENST00000414981 MPP3Q13368 585 aa4.71□□□□□ -1.66
HMGB3P23-201ENST00000414981 SNAPC2Q13487 334 aa4.71□□□□□ -1.66
HMGB3P23-201ENST00000414981 ZNF365Q70YC5 407 aa4.71□□□□□ -1.66
HMGB3P23-201ENST00000414981 NOL8Q76FK4 1167 aaKnown RBP4.71□□□□□ -1.66
HMGB3P23-201ENST00000414981 LNX2Q8N448 690 aa4.71□□□□□ -1.66
HMGB3P23-201ENST00000414981 C3orf20Q8ND61 904 aa4.71□□□□□ -1.66
HMGB3P23-201ENST00000414981 KAT5Q92993 513 aa4.71□□□□□ -1.66
HMGB3P23-201ENST00000414981 RAB24Q969Q5 203 aa4.71□□□□□ -1.66
HMGB3P23-201ENST00000414981 RNF31Q96EP0 1072 aa4.71□□□□□ -1.66
HMGB3P23-201ENST00000414981 Q96MF0 132 aa4.71□□□□□ -1.66
HMGB3P23-201ENST00000414981 PACSIN1Q9BY11 444 aa4.71□□□□□ -1.66
HMGB3P23-201ENST00000414981 SYNPO2LQ9H987 977 aa4.71□□□□□ -1.66
HMGB3P23-201ENST00000414981 TESQ9UGI8 421 aaKnown RBP4.71□□□□□ -1.66
HMGB3P23-201ENST00000414981 USP25Q9UHP3 1055 aa4.71□□□□□ -1.66
HMGB3P23-201ENST00000414981 DMTF1Q9Y222 760 aa4.71□□□□□ -1.66
HMGB3P23-201ENST00000414981 TOP2AP11388 1531 aaKnown RBP4.71□□□□□ -1.66
HMGB3P23-201ENST00000414981 BAZ1BQ9UIG0 1483 aaKnown RBP4.7□□□□□ -1.66
HMGB3P23-201ENST00000414981 A0A1W2PS29 197 aa4.7□□□□□ -1.66
HMGB3P23-201ENST00000414981 PLEKHD1A6NEE1 506 aa4.7□□□□□ -1.66
HMGB3P23-201ENST00000414981 MARCH6O60337 910 aa4.7□□□□□ -1.66
HMGB3P23-201ENST00000414981 FCER1AP12319 257 aa4.7□□□□□ -1.66
HMGB3P23-201ENST00000414981 FDXRP22570 491 aa4.7□□□□□ -1.66
HMGB3P23-201ENST00000414981 SMARCA1P28370 1054 aa4.7□□□□□ -1.66
HMGB3P23-201ENST00000414981 ANAPC15P60006 121 aa4.7□□□□□ -1.66
HMGB3P23-201ENST00000414981 POU6F2P78424 691 aaPredicted RBP4.7□□□□□ -1.66
HMGB3P23-201ENST00000414981 ZNF844Q08AG5 666 aa4.7□□□□□ -1.66
HMGB3P23-201ENST00000414981 FLYWCH1Q4VC44 716 aa4.7□□□□□ -1.66
HMGB3P23-201ENST00000414981 USP45Q70EL2 814 aa4.7□□□□□ -1.66
HMGB3P23-201ENST00000414981 PDSS2Q86YH6 399 aa4.7□□□□□ -1.66
HMGB3P23-201ENST00000414981 EXOC8Q8IYI6 725 aa4.7□□□□□ -1.66
HMGB3P23-201ENST00000414981 SMAD5Q99717 465 aaKnown RBP4.7□□□□□ -1.66
HMGB3P23-201ENST00000414981 VRK1Q99986 396 aaPredicted RBP4.7□□□□□ -1.66
HMGB3P23-201ENST00000414981 ANP32EQ9BTT0 268 aa4.7□□□□□ -1.66
HMGB3P23-201ENST00000414981 GNL3LQ9NVN8 582 aaKnown RBP4.7□□□□□ -1.66
HMGB3P23-201ENST00000414981 RLIMQ9NVW2 624 aa4.7□□□□□ -1.66
HMGB3P23-201ENST00000414981 CEP164Q9UPV0 1460 aa4.69□□□□□ -1.66
HMGB3P23-201ENST00000414981 PRAMEF33A0A0G2JMD5 474 aa4.69□□□□□ -1.66
HMGB3P23-201ENST00000414981 NT5C1B-RDH14C9J2C7 533 aa4.69□□□□□ -1.66
HMGB3P23-201ENST00000414981 F2RL2O00254 374 aa4.69□□□□□ -1.66
HMGB3P23-201ENST00000414981 PRAMEF10O60809 474 aa4.69□□□□□ -1.66
HMGB3P23-201ENST00000414981 CD1AP06126 327 aa4.69□□□□□ -1.66
HMGB3P23-201ENST00000414981 KCNA2P16389 499 aa4.69□□□□□ -1.66
HMGB3P23-201ENST00000414981 BMP5P22003 454 aa4.69□□□□□ -1.66
HMGB3P23-201ENST00000414981 NEK2P51955 445 aa4.69□□□□□ -1.66
HMGB3P23-201ENST00000414981 ERCC6LQ2NKX8 1250 aa4.69□□□□□ -1.66
HMGB3P23-201ENST00000414981 CLNKQ7Z7G1 428 aa4.69□□□□□ -1.66
HMGB3P23-201ENST00000414981 ZBTB46Q86UZ6 589 aa4.69□□□□□ -1.66
HMGB3P23-201ENST00000414981 DNAJC10Q8IXB1 793 aa4.69□□□□□ -1.66
HMGB3P23-201ENST00000414981 HSPBAP1Q96EW2 488 aa4.69□□□□□ -1.66
HMGB3P23-201ENST00000414981 PTCD3Q96EY7 689 aaKnown RBP4.69□□□□□ -1.66
HMGB3P23-201ENST00000414981 KLHL32Q96NJ5 620 aa4.69□□□□□ -1.66
HMGB3P23-201ENST00000414981 NUP88Q99567 741 aaPredicted RBP4.69□□□□□ -1.66
HMGB3P23-201ENST00000414981 CASS4Q9NQ75 786 aa4.69□□□□□ -1.66
HMGB3P23-201ENST00000414981 SLC52A1Q9NWF4 448 aa4.69□□□□□ -1.66
HMGB3P23-201ENST00000414981 ANKRD6Q9Y2G4 727 aa4.69□□□□□ -1.66
HMGB3P23-201ENST00000414981 KIF21BO75037 1637 aa4.68□□□□□ -1.66
HMGB3P23-201ENST00000414981 hCG_2014768A0A024R1R8 64 aa4.68□□□□□ -1.66
HMGB3P23-201ENST00000414981 ZAR1LA6NP61 321 aa4.68□□□□□ -1.66
HMGB3P23-201ENST00000414981 E7ENX8 843 aa4.68□□□□□ -1.66
HMGB3P23-201ENST00000414981 OVOL3O00110 214 aa4.68□□□□□ -1.66
HMGB3P23-201ENST00000414981 DTNBO60941 627 aa4.68□□□□□ -1.66
HMGB3P23-201ENST00000414981 ZFPL1O95159 310 aa4.68□□□□□ -1.66
HMGB3P23-201ENST00000414981 NCLP19338 710 aaKnown RBP4.68□□□□□ -1.66
HMGB3P23-201ENST00000414981 HK3P52790 923 aa4.68□□□□□ -1.66
HMGB3P23-201ENST00000414981 NANOS3P60323 173 aaKnown RBP4.68□□□□□ -1.66
HMGB3P23-201ENST00000414981 RPS7P62081 194 aaKnown RBP4.68□□□□□ -1.66
HMGB3P23-201ENST00000414981 IGBP1P78318 339 aa4.68□□□□□ -1.66
HMGB3P23-201ENST00000414981 TAP2Q03519 686 aa4.68□□□□□ -1.66
HMGB3P23-201ENST00000414981 FPGSQ05932 587 aa4.68□□□□□ -1.66
HMGB3P23-201ENST00000414981 PIGFQ07326 219 aa4.68□□□□□ -1.66
HMGB3P23-201ENST00000414981 DYRK1AQ13627 763 aa4.68□□□□□ -1.66
HMGB3P23-201ENST00000414981 PRR16Q569H4 304 aa4.68□□□□□ -1.66
HMGB3P23-201ENST00000414981 SLC4A10Q6U841 1118 aa4.68□□□□□ -1.66
HMGB3P23-201ENST00000414981 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.68□□□□□ -1.66
HMGB3P23-201ENST00000414981 Q6ZNX1 250 aa4.68□□□□□ -1.66
HMGB3P23-201ENST00000414981 CFAP52Q8N1V2 620 aa4.68□□□□□ -1.66
HMGB3P23-201ENST00000414981 SCAMP4Q969E2 229 aa4.68□□□□□ -1.66
HMGB3P23-201ENST00000414981 RIOX1Q9H6W3 641 aa4.68□□□□□ -1.66
HMGB3P23-201ENST00000414981 BRD9Q9H8M2 597 aa4.68□□□□□ -1.66
HMGB3P23-201ENST00000414981 ALG13Q9NP73 1137 aaKnown RBP4.68□□□□□ -1.66
HMGB3P23-201ENST00000414981 VSX1Q9NZR4 365 aaPredicted RBP4.68□□□□□ -1.66
HMGB3P23-201ENST00000414981 CTTNBP2NLQ9P2B4 639 aa4.68□□□□□ -1.66
HMGB3P23-201ENST00000414981 CFAP97Q9P2B7 532 aa4.68□□□□□ -1.66
HMGB3P23-201ENST00000414981 ZNHIT2Q9UHR6 403 aa4.68□□□□□ -1.66
HMGB3P23-201ENST00000414981 SLC45A2Q9UMX9 530 aa4.68□□□□□ -1.66
HMGB3P23-201ENST00000414981 LUC7L2Q9Y383 392 aaKnown RBP4.68□□□□□ -1.66
HMGB3P23-201ENST00000414981 CECR2Q9BXF3 1484 aa4.68□□□□□ -1.66
HMGB3P23-201ENST00000414981 VPS8Q8N3P4 1428 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms