RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 PPARGC1AQ9UBK2 798 aaKnown RBP18.16■□□□□ 0.5
PHRF1-202ENST00000413872 DBR1Q9UK59 544 aaKnown RBP18.16■□□□□ 0.5
PHRF1-202ENST00000413872 SPECC1L-ADORA2AF8WAN1 911 aa18.16■□□□□ 0.5
PHRF1-202ENST00000413872 DNAJC6O75061 913 aa18.16■□□□□ 0.5
PHRF1-202ENST00000413872 BRAFP15056 766 aa18.16■□□□□ 0.5
PHRF1-202ENST00000413872 PPATQ06203 517 aa18.16■□□□□ 0.5
PHRF1-202ENST00000413872 TBCCQ15814 346 aa18.16■□□□□ 0.5
PHRF1-202ENST00000413872 BOLA3Q53S33 107 aa18.16■□□□□ 0.5
PHRF1-202ENST00000413872 SH3KBP1Q96B97 665 aa18.16■□□□□ 0.5
PHRF1-202ENST00000413872 CHP1Q99653 195 aa18.16■□□□□ 0.5
PHRF1-202ENST00000413872 TRIM45Q9H8W5 580 aaPredicted RBP18.16■□□□□ 0.5
PHRF1-202ENST00000413872 MED24O75448 989 aa18.15■□□□□ 0.5
PHRF1-202ENST00000413872 WEE2P0C1S8 567 aa18.15■□□□□ 0.5
PHRF1-202ENST00000413872 MRPS25P82663 173 aaKnown RBP18.15■□□□□ 0.5
PHRF1-202ENST00000413872 PTPAQ15257 358 aa18.15■□□□□ 0.5
PHRF1-202ENST00000413872 FBXO16Q8IX29 292 aaPredicted RBP18.15■□□□□ 0.5
PHRF1-202ENST00000413872 SOCS4Q8WXH5 440 aa18.15■□□□□ 0.5
PHRF1-202ENST00000413872 PBXIP1Q96AQ6 731 aa18.15■□□□□ 0.5
PHRF1-202ENST00000413872 TMEM117Q9H0C3 514 aa18.15■□□□□ 0.5
PHRF1-202ENST00000413872 AGPAT5Q9NUQ2 364 aa18.15■□□□□ 0.5
PHRF1-202ENST00000413872 PAK5Q9P286 719 aa18.15■□□□□ 0.5
PHRF1-202ENST00000413872 DSEQ9UL01 958 aa18.15■□□□□ 0.5
PHRF1-202ENST00000413872 COL3A1P02461 1466 aaPredicted RBP18.15■□□□□ 0.5
PHRF1-202ENST00000413872 PGK2P07205 417 aa18.15■□□□□ 0.5
PHRF1-202ENST00000413872 HSP90AA5PQ58FG0 334 aa18.15■□□□□ 0.5
PHRF1-202ENST00000413872 FAM117BQ6P1L5 589 aa18.15■□□□□ 0.5
PHRF1-202ENST00000413872 TMC2Q8TDI7 906 aa18.15■□□□□ 0.5
PHRF1-202ENST00000413872 AGO4Q9HCK5 861 aaKnown RBP18.15■□□□□ 0.5
PHRF1-202ENST00000413872 VTA1Q9NP79 307 aa18.15■□□□□ 0.5
PHRF1-202ENST00000413872 ATP9BO43861 1147 aa18.15■□□□□ 0.5
PHRF1-202ENST00000413872 SCFD1Q8WVM8 642 aa18.15■□□□□ 0.5
PHRF1-202ENST00000413872 TSPAN17Q96FV3 270 aa18.15■□□□□ 0.5
PHRF1-202ENST00000413872 HDAC6Q9UBN7 1215 aa18.15■□□□□ 0.5
PHRF1-202ENST00000413872 MAP2P11137 1827 aaKnown RBP18.15■□□□□ 0.5
PHRF1-202ENST00000413872 PPP1R3GB7ZBB8 358 aa18.15■□□□□ 0.5
PHRF1-202ENST00000413872 CFLARO15519 480 aa18.15■□□□□ 0.5
PHRF1-202ENST00000413872 DDX53Q86TM3 631 aaKnown RBP18.15■□□□□ 0.5
PHRF1-202ENST00000413872 FEZF2Q8TBJ5 459 aa18.15■□□□□ 0.5
PHRF1-202ENST00000413872 NAGPAQ9UK23 515 aa18.15■□□□□ 0.5
PHRF1-202ENST00000413872 ANGPTL2Q9UKU9 493 aa18.15■□□□□ 0.5
PHRF1-202ENST00000413872 A0A0G2JND7 137 aa18.14■□□□□ 0.49
PHRF1-202ENST00000413872 SPAG6O75602 509 aa18.14■□□□□ 0.49
PHRF1-202ENST00000413872 EGFRP00533 1210 aa18.14■□□□□ 0.49
PHRF1-202ENST00000413872 LRG1P02750 347 aa18.14■□□□□ 0.49
PHRF1-202ENST00000413872 GUCY2CP25092 1073 aa18.14■□□□□ 0.49
PHRF1-202ENST00000413872 KLRC1P26715 233 aa18.14■□□□□ 0.49
PHRF1-202ENST00000413872 FXR1P51114 621 aaKnown RBP eCLIP18.14■□□□□ 0.49
PHRF1-202ENST00000413872 SLC7A14Q8TBB6 771 aa18.14■□□□□ 0.49
PHRF1-202ENST00000413872 NSMCE4AQ9NXX6 385 aa18.14■□□□□ 0.49
PHRF1-202ENST00000413872 GTF3C4Q9UKN8 822 aa18.14■□□□□ 0.49
PHRF1-202ENST00000413872 PRG3Q9Y2Y8 225 aaPredicted RBP18.14■□□□□ 0.49
PHRF1-202ENST00000413872 KIF1AQ12756 1690 aa18.14■□□□□ 0.49
PHRF1-202ENST00000413872 PDHXO00330 501 aa18.14■□□□□ 0.49
PHRF1-202ENST00000413872 NPTX2P47972 431 aa18.14■□□□□ 0.49
PHRF1-202ENST00000413872 IL31Q6EBC2 164 aa18.14■□□□□ 0.49
PHRF1-202ENST00000413872 TBC1D19Q8N5T2 526 aa18.14■□□□□ 0.49
PHRF1-202ENST00000413872 ENGASEQ8NFI3 743 aa18.14■□□□□ 0.49
PHRF1-202ENST00000413872 THEGQ9P2T0 379 aa18.14■□□□□ 0.49
PHRF1-202ENST00000413872 MROH2AA6NES4 1674 aa18.14■□□□□ 0.49
PHRF1-202ENST00000413872 PPP2R2AP63151 447 aa18.14■□□□□ 0.49
PHRF1-202ENST00000413872 ATP6V0D2Q8N8Y2 350 aa18.14■□□□□ 0.49
PHRF1-202ENST00000413872 AMACRQ9UHK6 382 aa18.14■□□□□ 0.49
PHRF1-202ENST00000413872 MAPTP10636 758 aaKnown RBP18.14■□□□□ 0.49
PHRF1-202ENST00000413872 MORF4L2Q15014 288 aa18.14■□□□□ 0.49
PHRF1-202ENST00000413872 DCAF6Q58WW2 860 aa18.14■□□□□ 0.49
PHRF1-202ENST00000413872 ADGRA1Q86SQ6 560 aa18.14■□□□□ 0.49
PHRF1-202ENST00000413872 NUDCD3Q8IVD9 361 aa18.14■□□□□ 0.49
PHRF1-202ENST00000413872 FRMD8Q9BZ67 464 aaPredicted RBP18.14■□□□□ 0.49
PHRF1-202ENST00000413872 OSBPL8Q9BZF1 889 aa18.14■□□□□ 0.49
PHRF1-202ENST00000413872 MUC3BQ9H195 1237 aa18.14■□□□□ 0.49
PHRF1-202ENST00000413872 PIK3R2O00459 728 aa18.13■□□□□ 0.49
PHRF1-202ENST00000413872 NFIBO00712 420 aa18.13■□□□□ 0.49
PHRF1-202ENST00000413872 SERPINB9P50453 376 aa18.13■□□□□ 0.49
PHRF1-202ENST00000413872 CLCN3P51790 818 aa18.13■□□□□ 0.49
PHRF1-202ENST00000413872 MAGOHP61326 146 aaKnown RBP18.13■□□□□ 0.49
PHRF1-202ENST00000413872 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.13■□□□□ 0.49
PHRF1-202ENST00000413872 CALML6Q8TD86 181 aa18.13■□□□□ 0.49
PHRF1-202ENST00000413872 ATP8B4Q8TF62 1192 aa18.13■□□□□ 0.49
PHRF1-202ENST00000413872 ANKS1AQ92625 1134 aa18.13■□□□□ 0.49
PHRF1-202ENST00000413872 CPA4Q9UI42 421 aa18.13■□□□□ 0.49
PHRF1-202ENST00000413872 SLC30A1Q9Y6M5 507 aa18.13■□□□□ 0.49
PHRF1-202ENST00000413872 VDRP11473 427 aa18.13■□□□□ 0.49
PHRF1-202ENST00000413872 ELAVL2Q12926 359 aaKnown RBP18.13■□□□□ 0.49
PHRF1-202ENST00000413872 FAM133BQ5BKY9 247 aaKnown RBP18.13■□□□□ 0.49
PHRF1-202ENST00000413872 TRMT10CQ7L0Y3 403 aaKnown RBP18.13■□□□□ 0.49
PHRF1-202ENST00000413872 KBTBD4Q9NVX7 518 aa18.13■□□□□ 0.49
PHRF1-202ENST00000413872 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.13■□□□□ 0.49
PHRF1-202ENST00000413872 PYGBP11216 843 aa18.13■□□□□ 0.49
PHRF1-202ENST00000413872 DDR1Q08345 913 aa18.13■□□□□ 0.49
PHRF1-202ENST00000413872 TMEM132BQ14DG7 1078 aa18.13■□□□□ 0.49
PHRF1-202ENST00000413872 NCAPHQ15003 741 aa18.13■□□□□ 0.49
PHRF1-202ENST00000413872 ANGPTL8Q6UXH0 198 aa18.13■□□□□ 0.49
PHRF1-202ENST00000413872 CHSY1Q86X52 802 aa18.13■□□□□ 0.49
PHRF1-202ENST00000413872 FOPNLQ96NB1 174 aa18.13■□□□□ 0.49
PHRF1-202ENST00000413872 CGRRF1Q99675 332 aa18.13■□□□□ 0.49
PHRF1-202ENST00000413872 ELAC2Q9BQ52 826 aaKnown RBP18.13■□□□□ 0.49
PHRF1-202ENST00000413872 L3MBTL1Q9Y468 752 aa18.13■□□□□ 0.49
PHRF1-202ENST00000413872 KDM4FA0A1W2PPD8 638 aa18.13■□□□□ 0.49
PHRF1-202ENST00000413872 VWA5AO00534 786 aa18.13■□□□□ 0.49
PHRF1-202ENST00000413872 HMBSP08397 361 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms