RNA–Protein interactions for RNA: ENST00000413593.5

TMEM248-202, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-202ENST00000413593 ZNF280DQ6N043 979 aa10.89□□□□□ -0.67
TMEM248-202ENST00000413593 DSTYKQ6XUX3 929 aa10.89□□□□□ -0.67
TMEM248-202ENST00000413593 GPR149Q86SP6 731 aa10.89□□□□□ -0.67
TMEM248-202ENST00000413593 GJD3Q8N144 294 aa10.89□□□□□ -0.67
TMEM248-202ENST00000413593 C1orf127Q8N9H9 656 aa10.89□□□□□ -0.67
TMEM248-202ENST00000413593 RDH13Q8NBN7 331 aa10.89□□□□□ -0.67
TMEM248-202ENST00000413593 CXorf38Q8TB03 319 aa10.89□□□□□ -0.67
TMEM248-202ENST00000413593 CACTINQ8WUQ7 758 aaKnown RBP10.89□□□□□ -0.67
TMEM248-202ENST00000413593 RIPOR3Q96MK2 946 aa10.89□□□□□ -0.67
TMEM248-202ENST00000413593 NECTIN4Q96NY8 510 aa10.89□□□□□ -0.67
TMEM248-202ENST00000413593 POP1Q99575 1024 aaKnown RBP10.89□□□□□ -0.67
TMEM248-202ENST00000413593 PHF7Q9BWX1 381 aaPredicted RBP10.89□□□□□ -0.67
TMEM248-202ENST00000413593 FBXL5Q9UKA1 691 aa10.89□□□□□ -0.67
TMEM248-202ENST00000413593 BDP1A6H8Y1 2624 aa10.89□□□□□ -0.67
TMEM248-202ENST00000413593 VCANP13611 3396 aa10.88□□□□□ -0.67
TMEM248-202ENST00000413593 PTPRJQ12913 1337 aa10.88□□□□□ -0.67
TMEM248-202ENST00000413593 EXOC3O60645 756 aa10.88□□□□□ -0.67
TMEM248-202ENST00000413593 RFPL2O75678 378 aa10.88□□□□□ -0.67
TMEM248-202ENST00000413593 ZMYND10O75800 440 aa10.88□□□□□ -0.67
TMEM248-202ENST00000413593 OAZ2O95190 189 aa10.88□□□□□ -0.67
TMEM248-202ENST00000413593 PAPLNO95428 1278 aa10.88□□□□□ -0.67
TMEM248-202ENST00000413593 ITGB3P05106 788 aa10.88□□□□□ -0.67
TMEM248-202ENST00000413593 TMEM191BP0C7N4 346 aa10.88□□□□□ -0.67
TMEM248-202ENST00000413593 TYMPP19971 482 aa10.88□□□□□ -0.67
TMEM248-202ENST00000413593 POLR2BP30876 1174 aaKnown RBP10.88□□□□□ -0.67
TMEM248-202ENST00000413593 SSTR3P32745 418 aaPredicted RBP10.88□□□□□ -0.67
TMEM248-202ENST00000413593 PNPLA4P41247 253 aa10.88□□□□□ -0.67
TMEM248-202ENST00000413593 TAF6P49848 677 aa10.88□□□□□ -0.67
TMEM248-202ENST00000413593 ROR1Q01973 937 aa10.88□□□□□ -0.67
TMEM248-202ENST00000413593 YWHAHQ04917 246 aaPredicted RBP10.88□□□□□ -0.67
TMEM248-202ENST00000413593 CYP24A1Q07973 514 aa10.88□□□□□ -0.67
TMEM248-202ENST00000413593 PSMD6Q15008 389 aa10.88□□□□□ -0.67
TMEM248-202ENST00000413593 SURF1Q15526 300 aa10.88□□□□□ -0.67
TMEM248-202ENST00000413593 CTXN3Q4LDR2 81 aa10.88□□□□□ -0.67
TMEM248-202ENST00000413593 ATAT1Q5SQI0 421 aa10.88□□□□□ -0.67
TMEM248-202ENST00000413593 LMBRD2Q68DH5 695 aaPredicted RBP10.88□□□□□ -0.67
TMEM248-202ENST00000413593 C15orf39Q6ZRI6 1047 aa10.88□□□□□ -0.67
TMEM248-202ENST00000413593 SLC9A9Q8IVB4 645 aa10.88□□□□□ -0.67
TMEM248-202ENST00000413593 ELOA2Q8IYF1 753 aaPredicted RBP10.88□□□□□ -0.67
TMEM248-202ENST00000413593 GUF1Q8N442 669 aaKnown RBP10.88□□□□□ -0.67
TMEM248-202ENST00000413593 OR5B17Q8NGF7 314 aa10.88□□□□□ -0.67
TMEM248-202ENST00000413593 ZNF461Q8TAF7 563 aa10.88□□□□□ -0.67
TMEM248-202ENST00000413593 SPATA20Q8TB22 786 aa10.88□□□□□ -0.67
TMEM248-202ENST00000413593 TMEM174Q8WUU8 243 aa10.88□□□□□ -0.67
TMEM248-202ENST00000413593 ZNF707Q96C28 371 aaPredicted RBP10.88□□□□□ -0.67
TMEM248-202ENST00000413593 BORCS6Q96GS4 357 aa10.88□□□□□ -0.67
TMEM248-202ENST00000413593 SENP8Q96LD8 212 aa10.88□□□□□ -0.67
TMEM248-202ENST00000413593 ZNF560Q96MR9 790 aa10.88□□□□□ -0.67
TMEM248-202ENST00000413593 GSDMAQ96QA5 445 aa10.88□□□□□ -0.67
TMEM248-202ENST00000413593 RHOBTB2Q9BYZ6 727 aa10.88□□□□□ -0.67
TMEM248-202ENST00000413593 MTMR12Q9C0I1 747 aa10.88□□□□□ -0.67
TMEM248-202ENST00000413593 POMKQ9H5K3 350 aa10.88□□□□□ -0.67
TMEM248-202ENST00000413593 INTS13Q9NVM9 706 aa10.88□□□□□ -0.67
TMEM248-202ENST00000413593 DMAC2Q9NW81 257 aa10.88□□□□□ -0.67
TMEM248-202ENST00000413593 ZDHHC7Q9NXF8 308 aa10.88□□□□□ -0.67
TMEM248-202ENST00000413593 ITGA11Q9UKX5 1188 aa10.88□□□□□ -0.67
TMEM248-202ENST00000413593 MAPK8IP1Q9UQF2 711 aa10.88□□□□□ -0.67
TMEM248-202ENST00000413593 TRAF3IP3Q9Y228 551 aa10.88□□□□□ -0.67
TMEM248-202ENST00000413593 PCDHA5Q9Y5H7 936 aa10.88□□□□□ -0.67
TMEM248-202ENST00000413593 TIMM13Q9Y5L4 95 aaPredicted RBP10.88□□□□□ -0.67
TMEM248-202ENST00000413593 NCOR1O75376 2440 aa10.88□□□□□ -0.67
TMEM248-202ENST00000413593 CITO14578 2027 aa10.87□□□□□ -0.67
TMEM248-202ENST00000413593 CCDC195A0A1B0GUA6 201 aa10.87□□□□□ -0.67
TMEM248-202ENST00000413593 ARHGEF37A1IGU5 675 aa10.87□□□□□ -0.67
TMEM248-202ENST00000413593 WDR27A2RRH5 827 aa10.87□□□□□ -0.67
TMEM248-202ENST00000413593 LOC730098B7Z3J9 87 aa10.87□□□□□ -0.67
TMEM248-202ENST00000413593 KINO60870 393 aaKnown RBP10.87□□□□□ -0.67
TMEM248-202ENST00000413593 ABLIM3O94929 683 aa10.87□□□□□ -0.67
TMEM248-202ENST00000413593 SMC2O95347 1197 aa10.87□□□□□ -0.67
TMEM248-202ENST00000413593 NR3C1P04150 777 aa10.87□□□□□ -0.67
TMEM248-202ENST00000413593 CYP11A1P05108 521 aa10.87□□□□□ -0.67
TMEM248-202ENST00000413593 DLATP10515 647 aaKnown RBP10.87□□□□□ -0.67
TMEM248-202ENST00000413593 ODC1P11926 461 aa10.87□□□□□ -0.67
TMEM248-202ENST00000413593 CD44P16070 742 aaKnown RBP10.87□□□□□ -0.67
TMEM248-202ENST00000413593 MYBPC2Q14324 1141 aa10.87□□□□□ -0.67
TMEM248-202ENST00000413593 SV2CQ496J9 727 aa10.87□□□□□ -0.67
TMEM248-202ENST00000413593 LIN9Q5TKA1 542 aa10.87□□□□□ -0.67
TMEM248-202ENST00000413593 SCARA3Q6AZY7 606 aa10.87□□□□□ -0.67
TMEM248-202ENST00000413593 OVOS1Q6IE37 1185 aa10.87□□□□□ -0.67
TMEM248-202ENST00000413593 CYP26C1Q6V0L0 522 aa10.87□□□□□ -0.67
TMEM248-202ENST00000413593 USP37Q86T82 979 aa10.87□□□□□ -0.67
TMEM248-202ENST00000413593 WDR49Q8IV35 697 aa10.87□□□□□ -0.67
TMEM248-202ENST00000413593 SMYD4Q8IYR2 804 aaPredicted RBP10.87□□□□□ -0.67
TMEM248-202ENST00000413593 LRRC52Q8N7C0 313 aa10.87□□□□□ -0.67
TMEM248-202ENST00000413593 ERCC4Q92889 916 aaPredicted RBP10.87□□□□□ -0.67
TMEM248-202ENST00000413593 CCDC127Q96BQ5 260 aa10.87□□□□□ -0.67
TMEM248-202ENST00000413593 ANKRD36BP1Q96IX9 119 aa10.87□□□□□ -0.67
TMEM248-202ENST00000413593 RPGRIP1Q96KN7 1286 aa10.87□□□□□ -0.67
TMEM248-202ENST00000413593 MFSD14AQ96MC6 490 aa10.87□□□□□ -0.67
TMEM248-202ENST00000413593 CGRRF1Q99675 332 aa10.87□□□□□ -0.67
TMEM248-202ENST00000413593 PRKD2Q9BZL6 878 aa10.87□□□□□ -0.67
TMEM248-202ENST00000413593 GZF1Q9H116 711 aaPredicted RBP10.87□□□□□ -0.67
TMEM248-202ENST00000413593 RMND1Q9NWS8 449 aa10.87□□□□□ -0.67
TMEM248-202ENST00000413593 SIX4Q9UIU6 781 aa10.87□□□□□ -0.67
TMEM248-202ENST00000413593 HOOK1Q9UJC3 728 aaKnown RBP10.87□□□□□ -0.67
TMEM248-202ENST00000413593 AGAP1Q9UPQ3 857 aa10.87□□□□□ -0.67
TMEM248-202ENST00000413593 TCHHQ07283 1943 aa10.87□□□□□ -0.67
TMEM248-202ENST00000413593 OR6C75A6NL08 312 aa10.86□□□□□ -0.67
TMEM248-202ENST00000413593 KPNA7A9QM74 516 aa10.86□□□□□ -0.67
TMEM248-202ENST00000413593 CYB561D2O14569 222 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 143 ms