RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 HOXA3O43365 443 aaPredicted RBP5.72□□□□□ -1.49
HMGB3P31-201ENST00000413333 THAP12O43422 761 aa5.72□□□□□ -1.49
HMGB3P31-201ENST00000413333 HAUS5O94927 633 aa5.72□□□□□ -1.49
HMGB3P31-201ENST00000413333 POMCP01189 267 aa5.72□□□□□ -1.49
HMGB3P31-201ENST00000413333 AMHP03971 560 aa5.72□□□□□ -1.49
HMGB3P31-201ENST00000413333 THP07101 528 aa5.72□□□□□ -1.49
HMGB3P31-201ENST00000413333 ANXA2P07355 339 aaKnown RBP5.72□□□□□ -1.49
HMGB3P31-201ENST00000413333 C1QTNF9P0C862 333 aa5.72□□□□□ -1.49
HMGB3P31-201ENST00000413333 MED14OSP0DP75 135 aa5.72□□□□□ -1.49
HMGB3P31-201ENST00000413333 ALAS1P13196 640 aa5.72□□□□□ -1.49
HMGB3P31-201ENST00000413333 ALDH9A1P49189 494 aa5.72□□□□□ -1.49
HMGB3P31-201ENST00000413333 ZNF135P52742 658 aaPredicted RBP5.72□□□□□ -1.49
HMGB3P31-201ENST00000413333 RAC3P60763 192 aa5.72□□□□□ -1.49
HMGB3P31-201ENST00000413333 MESP2Q0VG99 397 aa5.72□□□□□ -1.49
HMGB3P31-201ENST00000413333 TMED8Q6PL24 325 aaPredicted RBP5.72□□□□□ -1.49
HMGB3P31-201ENST00000413333 LDHAL6AQ6ZMR3 332 aa5.72□□□□□ -1.49
HMGB3P31-201ENST00000413333 UNC13DQ70J99 1090 aa5.72□□□□□ -1.49
HMGB3P31-201ENST00000413333 ZNF365Q70YC5 407 aa5.72□□□□□ -1.49
HMGB3P31-201ENST00000413333 RNF44Q7L0R7 432 aa5.72□□□□□ -1.49
HMGB3P31-201ENST00000413333 BEND5Q7L4P6 421 aa5.72□□□□□ -1.49
HMGB3P31-201ENST00000413333 DNAJC5GQ8N7S2 189 aa5.72□□□□□ -1.49
HMGB3P31-201ENST00000413333 OR10H5Q8NGA6 315 aa5.72□□□□□ -1.49
HMGB3P31-201ENST00000413333 CFHR4Q92496 578 aa5.72□□□□□ -1.49
HMGB3P31-201ENST00000413333 MUL1Q969V5 352 aa5.72□□□□□ -1.49
HMGB3P31-201ENST00000413333 DACT3Q96B18 629 aaPredicted RBP5.72□□□□□ -1.49
HMGB3P31-201ENST00000413333 LRRC46Q96FV0 321 aa5.72□□□□□ -1.49
HMGB3P31-201ENST00000413333 FAM84AQ96KN4 292 aa5.72□□□□□ -1.49
HMGB3P31-201ENST00000413333 NAP1L4Q99733 375 aaKnown RBP5.72□□□□□ -1.49
HMGB3P31-201ENST00000413333 ZNF518BQ9C0D4 1074 aa5.72□□□□□ -1.49
HMGB3P31-201ENST00000413333 AGO3Q9H9G7 860 aaKnown RBP5.72□□□□□ -1.49
HMGB3P31-201ENST00000413333 RLIMQ9NVW2 624 aa5.72□□□□□ -1.49
HMGB3P31-201ENST00000413333 FBXO34Q9NWN3 711 aa5.72□□□□□ -1.49
HMGB3P31-201ENST00000413333 MYO1AQ9UBC5 1043 aa5.72□□□□□ -1.49
HMGB3P31-201ENST00000413333 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.72□□□□□ -1.49
HMGB3P31-201ENST00000413333 HDAC5Q9UQL6 1122 aa5.72□□□□□ -1.49
HMGB3P31-201ENST00000413333 MAN2B2Q9Y2E5 1009 aa5.72□□□□□ -1.49
HMGB3P31-201ENST00000413333 TMX2Q9Y320 296 aa5.72□□□□□ -1.49
HMGB3P31-201ENST00000413333 SLC4A7Q9Y6M7 1214 aa5.72□□□□□ -1.49
HMGB3P31-201ENST00000413333 PNPLA7Q6ZV29 1317 aa5.72□□□□□ -1.49
HMGB3P31-201ENST00000413333 CDHR4A6H8M9 788 aa5.71□□□□□ -1.5
HMGB3P31-201ENST00000413333 TBKBP1A7MCY6 615 aa5.71□□□□□ -1.5
HMGB3P31-201ENST00000413333 B5MCH6 92 aa5.71□□□□□ -1.5
HMGB3P31-201ENST00000413333 M0QYG6 137 aa5.71□□□□□ -1.5
HMGB3P31-201ENST00000413333 PJA2O43164 708 aa5.71□□□□□ -1.5
HMGB3P31-201ENST00000413333 CDC14BO60729 498 aa5.71□□□□□ -1.5
HMGB3P31-201ENST00000413333 PLA2G6O60733 806 aa5.71□□□□□ -1.5
HMGB3P31-201ENST00000413333 SKAP2O75563 359 aaPredicted RBP5.71□□□□□ -1.5
HMGB3P31-201ENST00000413333 RASSF9O75901 435 aa5.71□□□□□ -1.5
HMGB3P31-201ENST00000413333 AGFG2O95081 481 aa5.71□□□□□ -1.5
HMGB3P31-201ENST00000413333 CSTBP04080 98 aaKnown RBP5.71□□□□□ -1.5
HMGB3P31-201ENST00000413333 GRPP07492 148 aa5.71□□□□□ -1.5
HMGB3P31-201ENST00000413333 MYL4P12829 197 aa5.71□□□□□ -1.5
HMGB3P31-201ENST00000413333 CARSP49589 748 aaKnown RBP5.71□□□□□ -1.5
HMGB3P31-201ENST00000413333 UCP3P55916 312 aa5.71□□□□□ -1.5
HMGB3P31-201ENST00000413333 MXRA7P84157 204 aa5.71□□□□□ -1.5
HMGB3P31-201ENST00000413333 DUSP8Q13202 625 aa5.71□□□□□ -1.5
HMGB3P31-201ENST00000413333 UBXN2BQ14CS0 331 aa5.71□□□□□ -1.5
HMGB3P31-201ENST00000413333 CRB2Q5IJ48 1285 aa5.71□□□□□ -1.5
HMGB3P31-201ENST00000413333 TLDC1Q6P9B6 456 aa5.71□□□□□ -1.5
HMGB3P31-201ENST00000413333 USP37Q86T82 979 aa5.71□□□□□ -1.5
HMGB3P31-201ENST00000413333 FAM124AQ86V42 546 aa5.71□□□□□ -1.5
HMGB3P31-201ENST00000413333 MICU3Q86XE3 530 aa5.71□□□□□ -1.5
HMGB3P31-201ENST00000413333 SLC17A8Q8NDX2 589 aa5.71□□□□□ -1.5
HMGB3P31-201ENST00000413333 TBC1D15Q8TC07 691 aa5.71□□□□□ -1.5
HMGB3P31-201ENST00000413333 C18orf8Q96DM3 657 aa5.71□□□□□ -1.5
HMGB3P31-201ENST00000413333 LTV1Q96GA3 475 aaPredicted RBP5.71□□□□□ -1.5
HMGB3P31-201ENST00000413333 TMEM176AQ96HP8 235 aa5.71□□□□□ -1.5
HMGB3P31-201ENST00000413333 DPYSL5Q9BPU6 564 aa5.71□□□□□ -1.5
HMGB3P31-201ENST00000413333 UBA5Q9GZZ9 404 aa5.71□□□□□ -1.5
HMGB3P31-201ENST00000413333 MYLK2Q9H1R3 596 aa5.71□□□□□ -1.5
HMGB3P31-201ENST00000413333 SPON1Q9HCB6 807 aa5.71□□□□□ -1.5
HMGB3P31-201ENST00000413333 LRFN1Q9P244 771 aa5.71□□□□□ -1.5
HMGB3P31-201ENST00000413333 ZNF212Q9UDV6 495 aa5.71□□□□□ -1.5
HMGB3P31-201ENST00000413333 HDAC9Q9UKV0 1011 aa5.71□□□□□ -1.5
HMGB3P31-201ENST00000413333 AGAP1Q9UPQ3 857 aa5.71□□□□□ -1.5
HMGB3P31-201ENST00000413333 PLEKHM1Q9Y4G2 1056 aa5.71□□□□□ -1.5
HMGB3P31-201ENST00000413333 DGKBQ9Y6T7 804 aa5.71□□□□□ -1.5
HMGB3P31-201ENST00000413333 MATN2O00339 956 aa5.7□□□□□ -1.5
HMGB3P31-201ENST00000413333 DNAJB5O75953 348 aa5.7□□□□□ -1.5
HMGB3P31-201ENST00000413333 KRT1P04264 644 aa5.7□□□□□ -1.5
HMGB3P31-201ENST00000413333 SLC11A2P49281 568 aa5.7□□□□□ -1.5
HMGB3P31-201ENST00000413333 POU6F2P78424 691 aaPredicted RBP5.7□□□□□ -1.5
HMGB3P31-201ENST00000413333 KIAA2012Q0VF49 1180 aa5.7□□□□□ -1.5
HMGB3P31-201ENST00000413333 RALBP1Q15311 655 aa5.7□□□□□ -1.5
HMGB3P31-201ENST00000413333 ATXN7L2Q5T6C5 722 aaPredicted RBP5.7□□□□□ -1.5
HMGB3P31-201ENST00000413333 DCAF12L1Q5VU92 463 aa5.7□□□□□ -1.5
HMGB3P31-201ENST00000413333 FBXO38Q6PIJ6 1188 aa5.7□□□□□ -1.5
HMGB3P31-201ENST00000413333 FAM111BQ6SJ93 734 aa5.7□□□□□ -1.5
HMGB3P31-201ENST00000413333 PDSS2Q86YH6 399 aa5.7□□□□□ -1.5
HMGB3P31-201ENST00000413333 ATG16L2Q8NAA4 619 aa5.7□□□□□ -1.5
HMGB3P31-201ENST00000413333 FANCBQ8NB91 859 aa5.7□□□□□ -1.5
HMGB3P31-201ENST00000413333 TP53I13Q8NBR0 393 aaPredicted RBP5.7□□□□□ -1.5
HMGB3P31-201ENST00000413333 RNF169Q8NCN4 708 aa5.7□□□□□ -1.5
HMGB3P31-201ENST00000413333 OR56A3Q8NH54 315 aa5.7□□□□□ -1.5
HMGB3P31-201ENST00000413333 PNISRQ8TF01 805 aaKnown RBP5.7□□□□□ -1.5
HMGB3P31-201ENST00000413333 ATXN2LQ8WWM7 1075 aaKnown RBP5.7□□□□□ -1.5
HMGB3P31-201ENST00000413333 TFAP2CQ92754 450 aa5.7□□□□□ -1.5
HMGB3P31-201ENST00000413333 PHACTR3Q96KR7 559 aa5.7□□□□□ -1.5
HMGB3P31-201ENST00000413333 HEPHQ9BQS7 1158 aa5.7□□□□□ -1.5
HMGB3P31-201ENST00000413333 STK33Q9BYT3 514 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms