RNA–Protein interactions for RNA: ENST00000412827.6

PUDP-202, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 2 BASIC

Gene PUDP, Length 1,376 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-202ENST00000412827 NOMO2Q5JPE7 1267 aa16.25■□□□□ 0.19
PUDP-202ENST00000412827 ZBTB41Q5SVQ8 909 aa16.25■□□□□ 0.19
PUDP-202ENST00000412827 FAM117BQ6P1L5 589 aa16.25■□□□□ 0.19
PUDP-202ENST00000412827 AGMOQ6ZNB7 445 aa16.25■□□□□ 0.19
PUDP-202ENST00000412827 HELQQ8TDG4 1101 aa16.25■□□□□ 0.19
PUDP-202ENST00000412827 TSGA10Q9BZW7 698 aa16.25■□□□□ 0.19
PUDP-202ENST00000412827 FAM124BQ9H5Z6 455 aaPredicted RBP16.25■□□□□ 0.19
PUDP-202ENST00000412827 HAUS4Q9H6D7 363 aa16.25■□□□□ 0.19
PUDP-202ENST00000412827 UBE2TQ9NPD8 197 aaPredicted RBP16.25■□□□□ 0.19
PUDP-202ENST00000412827 TRMT1Q9NXH9 659 aaKnown RBP16.25■□□□□ 0.19
PUDP-202ENST00000412827 MYO1AQ9UBC5 1043 aa16.25■□□□□ 0.19
PUDP-202ENST00000412827 C2CD2Q9Y426 696 aa16.25■□□□□ 0.19
PUDP-202ENST00000412827 ARL5CA6NH57 179 aa16.24■□□□□ 0.19
PUDP-202ENST00000412827 TBKBP1A7MCY6 615 aa16.24■□□□□ 0.19
PUDP-202ENST00000412827 PHACTR2O75167 634 aa16.24■□□□□ 0.19
PUDP-202ENST00000412827 HLA-DRAP01903 254 aa16.24■□□□□ 0.19
PUDP-202ENST00000412827 FGFR1P11362 822 aa16.24■□□□□ 0.19
PUDP-202ENST00000412827 TNFSF9P41273 254 aa16.24■□□□□ 0.19
PUDP-202ENST00000412827 PIK3CAP42336 1068 aa16.24■□□□□ 0.19
PUDP-202ENST00000412827 KIF11P52732 1056 aa16.24■□□□□ 0.19
PUDP-202ENST00000412827 HTRA4P83105 476 aaPredicted RBP16.24■□□□□ 0.19
PUDP-202ENST00000412827 RNASELQ05823 741 aaKnown RBP16.24■□□□□ 0.19
PUDP-202ENST00000412827 BIRC3Q13489 604 aa16.24■□□□□ 0.19
PUDP-202ENST00000412827 BTG3Q14201 252 aaPredicted RBP16.24■□□□□ 0.19
PUDP-202ENST00000412827 BMS1Q14692 1282 aaKnown RBP16.24■□□□□ 0.19
PUDP-202ENST00000412827 MTF1Q14872 753 aa16.24■□□□□ 0.19
PUDP-202ENST00000412827 SGSM1Q2NKQ1 1148 aa16.24■□□□□ 0.19
PUDP-202ENST00000412827 TDRD12Q587J7 1177 aaKnown RBP16.24■□□□□ 0.19
PUDP-202ENST00000412827 CLLU1OSQ5K130 101 aa16.24■□□□□ 0.19
PUDP-202ENST00000412827 TDRD10Q5VZ19 366 aaKnown RBP16.24■□□□□ 0.19
PUDP-202ENST00000412827 CRIPAKQ8N1N5 446 aa16.24■□□□□ 0.19
PUDP-202ENST00000412827 C17orf53Q8N3J3 647 aaPredicted RBP16.24■□□□□ 0.19
PUDP-202ENST00000412827 SHC3Q92529 594 aa16.24■□□□□ 0.19
PUDP-202ENST00000412827 SEMA4DQ92854 862 aa16.24■□□□□ 0.19
PUDP-202ENST00000412827 FAM193BQ96PV7 902 aaPredicted RBP16.24■□□□□ 0.19
PUDP-202ENST00000412827 GAD1Q99259 594 aa16.24■□□□□ 0.19
PUDP-202ENST00000412827 PRO3102Q9H379 93 aa16.24■□□□□ 0.19
PUDP-202ENST00000412827 CNTN3Q9P232 1028 aa16.24■□□□□ 0.19
PUDP-202ENST00000412827 MSRAQ9UJ68 235 aa16.24■□□□□ 0.19
PUDP-202ENST00000412827 RWDD3Q9Y3V2 267 aa16.24■□□□□ 0.19
PUDP-202ENST00000412827 USP27XA6NNY8 438 aa16.23■□□□□ 0.19
PUDP-202ENST00000412827 TMEM191BP0C7N4 346 aa16.23■□□□□ 0.19
PUDP-202ENST00000412827 BPIFB4P59827 614 aa16.23■□□□□ 0.19
PUDP-202ENST00000412827 APBA1Q02410 837 aa16.23■□□□□ 0.19
PUDP-202ENST00000412827 SLC18A3Q16572 532 aa16.23■□□□□ 0.19
PUDP-202ENST00000412827 ARHGAP29Q52LW3 1261 aa16.23■□□□□ 0.19
PUDP-202ENST00000412827 SEZ6Q53EL9 994 aa16.23■□□□□ 0.19
PUDP-202ENST00000412827 TRAPPC11Q7Z392 1133 aa16.23■□□□□ 0.19
PUDP-202ENST00000412827 FAM71AQ8IYT1 594 aa16.23■□□□□ 0.19
PUDP-202ENST00000412827 FAM212AQ96EL1 285 aa16.23■□□□□ 0.19
PUDP-202ENST00000412827 RNF39Q9H2S5 420 aa16.23■□□□□ 0.19
PUDP-202ENST00000412827 AAASQ9NRG9 546 aa16.23■□□□□ 0.19
PUDP-202ENST00000412827 PCDHA11Q9Y5I1 949 aa16.23■□□□□ 0.19
PUDP-202ENST00000412827 KRT86O43790 486 aa16.22■□□□□ 0.19
PUDP-202ENST00000412827 THP07101 528 aa16.22■□□□□ 0.19
PUDP-202ENST00000412827 TNNT1P13805 278 aa16.22■□□□□ 0.19
PUDP-202ENST00000412827 KCNE1P15382 129 aa16.22■□□□□ 0.19
PUDP-202ENST00000412827 ATICP31939 592 aa16.22■□□□□ 0.19
PUDP-202ENST00000412827 SCNN1GP51170 649 aa16.22■□□□□ 0.19
PUDP-202ENST00000412827 VAV2P52735 878 aa16.22■□□□□ 0.19
PUDP-202ENST00000412827 ETF1P62495 437 aaKnown RBP16.22■□□□□ 0.19
PUDP-202ENST00000412827 NCOA4Q13772 614 aa16.22■□□□□ 0.19
PUDP-202ENST00000412827 TMEM132DQ14C87 1099 aa16.22■□□□□ 0.19
PUDP-202ENST00000412827 XKR4Q5GH76 650 aa16.22■□□□□ 0.19
PUDP-202ENST00000412827 DNTTIP2Q5QJE6 756 aaKnown RBP16.22■□□□□ 0.19
PUDP-202ENST00000412827 PPM1KQ8N3J5 372 aa16.22■□□□□ 0.19
PUDP-202ENST00000412827 FIBCD1Q8N539 461 aa16.22■□□□□ 0.19
PUDP-202ENST00000412827 ZFP42Q96MM3 310 aa16.22■□□□□ 0.19
PUDP-202ENST00000412827 GPR88Q9GZN0 384 aa16.22■□□□□ 0.19
PUDP-202ENST00000412827 RC3H2Q9HBD1 1191 aaKnown RBP16.22■□□□□ 0.19
PUDP-202ENST00000412827 KLK14Q9P0G3 267 aa16.22■□□□□ 0.19
PUDP-202ENST00000412827 INTUQ9ULD6 942 aa16.22■□□□□ 0.19
PUDP-202ENST00000412827 UBQLN1Q9UMX0 589 aaKnown RBP16.22■□□□□ 0.19
PUDP-202ENST00000412827 PAXBP1Q9Y5B6 917 aa16.22■□□□□ 0.19
PUDP-202ENST00000412827 PTPRJQ12913 1337 aa16.21■□□□□ 0.19
PUDP-202ENST00000412827 MEIS3P2A8K0S8 358 aa16.21■□□□□ 0.19
PUDP-202ENST00000412827 LACTBL1A8MY62 500 aa16.21■□□□□ 0.19
PUDP-202ENST00000412827 TULP1O00294 542 aaPredicted RBP16.21■□□□□ 0.19
PUDP-202ENST00000412827 FOXN3O00409 490 aaPredicted RBP16.21■□□□□ 0.19
PUDP-202ENST00000412827 PJA2O43164 708 aa16.21■□□□□ 0.19
PUDP-202ENST00000412827 VNN1O95497 513 aa16.21■□□□□ 0.19
PUDP-202ENST00000412827 STAU1O95793 577 aaKnown RBP16.21■□□□□ 0.19
PUDP-202ENST00000412827 ASS1P00966 412 aaKnown RBP16.21■□□□□ 0.19
PUDP-202ENST00000412827 LAG3P18627 525 aa16.21■□□□□ 0.19
PUDP-202ENST00000412827 WNT7BP56706 349 aa16.21■□□□□ 0.19
PUDP-202ENST00000412827 SMAD3P84022 425 aaKnown RBP16.21■□□□□ 0.19
PUDP-202ENST00000412827 TRPC3Q13507 836 aa16.21■□□□□ 0.19
PUDP-202ENST00000412827 SLC10A6Q3KNW5 377 aa16.21■□□□□ 0.19
PUDP-202ENST00000412827 PAN2Q504Q3 1202 aaKnown RBP16.21■□□□□ 0.19
PUDP-202ENST00000412827 SPOUT1Q5T280 376 aaKnown RBP16.21■□□□□ 0.19
PUDP-202ENST00000412827 GJB7Q6PEY0 223 aa16.21■□□□□ 0.19
PUDP-202ENST00000412827 KIAA1328Q86T90 577 aa16.21■□□□□ 0.19
PUDP-202ENST00000412827 ARHGEF19Q8IW93 802 aa16.21■□□□□ 0.19
PUDP-202ENST00000412827 TMEM192Q8IY95 271 aa16.21■□□□□ 0.19
PUDP-202ENST00000412827 BEST2Q8NFU1 509 aa16.21■□□□□ 0.19
PUDP-202ENST00000412827 OR5B17Q8NGF7 314 aa16.21■□□□□ 0.19
PUDP-202ENST00000412827 SP7Q8TDD2 431 aaPredicted RBP16.21■□□□□ 0.19
PUDP-202ENST00000412827 ZNF689Q96CS4 500 aaPredicted RBP16.21■□□□□ 0.19
PUDP-202ENST00000412827 KIF12Q96FN5 646 aa16.21■□□□□ 0.19
PUDP-202ENST00000412827 CASD1Q96PB1 797 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms