RNA–Protein interactions for RNA: ENST00000412056.5

CPNE1-206, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-206ENST00000412056 LRRC52Q8N7C0 313 aa15.04■□□□□ -0
CPNE1-206ENST00000412056 VN1R2Q8NFZ6 395 aa15.04■□□□□ -0
CPNE1-206ENST00000412056 LNX1Q8TBB1 728 aaPredicted RBP15.04■□□□□ -0
CPNE1-206ENST00000412056 SENP8Q96LD8 212 aa15.04■□□□□ -0
CPNE1-206ENST00000412056 CEP63Q96MT8 703 aa15.04■□□□□ -0
CPNE1-206ENST00000412056 KLHL5Q96PQ7 755 aa15.04■□□□□ -0
CPNE1-206ENST00000412056 RWDD2AQ9UIY3 292 aa15.04■□□□□ -0
CPNE1-206ENST00000412056 SSX2IPQ9Y2D8 614 aa15.04■□□□□ -0
CPNE1-206ENST00000412056 TIMM13Q9Y5L4 95 aaPredicted RBP15.04■□□□□ -0
CPNE1-206ENST00000412056 SYN3O14994 580 aa15.03■□□□□ -0
CPNE1-206ENST00000412056 TEX28O15482 410 aa15.03■□□□□ -0
CPNE1-206ENST00000412056 CST3P01034 146 aaPredicted RBP15.03■□□□□ -0
CPNE1-206ENST00000412056 C4BPAP04003 597 aaKnown RBP15.03■□□□□ -0
CPNE1-206ENST00000412056 PTMSP20962 102 aa15.03■□□□□ -0
CPNE1-206ENST00000412056 PNPLA4P41247 253 aa15.03■□□□□ -0
CPNE1-206ENST00000412056 PPP3CAQ08209 521 aa15.03■□□□□ -0
CPNE1-206ENST00000412056 BIRC3Q13489 604 aa15.03■□□□□ -0
CPNE1-206ENST00000412056 COL19A1Q14993 1142 aa15.03■□□□□ -0
CPNE1-206ENST00000412056 KLHL40Q2TBA0 621 aa15.03■□□□□ -0
CPNE1-206ENST00000412056 VARS2Q5ST30 1063 aaKnown RBP15.03■□□□□ -0
CPNE1-206ENST00000412056 EP400NLQ6ZTU2 488 aa15.03■□□□□ -0
CPNE1-206ENST00000412056 GPR65Q8IYL9 337 aa15.03■□□□□ -0
CPNE1-206ENST00000412056 EFHBQ8N7U6 833 aa15.03■□□□□ -0
CPNE1-206ENST00000412056 CDCA3Q99618 268 aaPredicted RBP15.03■□□□□ -0
CPNE1-206ENST00000412056 EMILIN2Q9BXX0 1053 aa15.03■□□□□ -0
CPNE1-206ENST00000412056 RXFP1Q9HBX9 757 aa15.03■□□□□ -0
CPNE1-206ENST00000412056 CLDND1Q9NY35 253 aa15.03■□□□□ -0
CPNE1-206ENST00000412056 MTRRQ9UBK8 725 aa15.03■□□□□ -0
CPNE1-206ENST00000412056 C2orf16Q68DN1 1984 aa15.03■□□□□ -0
CPNE1-206ENST00000412056 CDH23Q9H251 3354 aa15.02■□□□□ -0
CPNE1-206ENST00000412056 KPNA7A9QM74 516 aa15.02■□□□□ -0
CPNE1-206ENST00000412056 ADAM12O43184 909 aa15.02■□□□□ -0
CPNE1-206ENST00000412056 PHACTR2O75167 634 aa15.02■□□□□ -0
CPNE1-206ENST00000412056 TBX10O75333 385 aa15.02■□□□□ -0
CPNE1-206ENST00000412056 VNN1O95497 513 aa15.02■□□□□ -0
CPNE1-206ENST00000412056 ODC1P11926 461 aa15.02■□□□□ -0
CPNE1-206ENST00000412056 KLRC2P26717 231 aa15.02■□□□□ -0
CPNE1-206ENST00000412056 AP3M2P53677 418 aa15.02■□□□□ -0
CPNE1-206ENST00000412056 ENPEPQ07075 957 aa15.02■□□□□ -0
CPNE1-206ENST00000412056 ADAM15Q13444 863 aa15.02■□□□□ -0
CPNE1-206ENST00000412056 ZACNQ401N2 412 aa15.02■□□□□ -0
CPNE1-206ENST00000412056 CCDC40Q4G0X9 1142 aa15.02■□□□□ -0
CPNE1-206ENST00000412056 DCAF17Q5H9S7 520 aaPredicted RBP15.02■□□□□ -0
CPNE1-206ENST00000412056 LLGL2Q6P1M3 1020 aa15.02■□□□□ -0
CPNE1-206ENST00000412056 SASS6Q6UVJ0 657 aa15.02■□□□□ -0
CPNE1-206ENST00000412056 RSPO2Q6UXX9 243 aaPredicted RBP15.02■□□□□ -0
CPNE1-206ENST00000412056 C11orf57Q6ZUT1 292 aaPredicted RBP15.02■□□□□ -0
CPNE1-206ENST00000412056 ANKS3Q6ZW76 656 aa15.02■□□□□ -0
CPNE1-206ENST00000412056 SV2AQ7L0J3 742 aa15.02■□□□□ -0
CPNE1-206ENST00000412056 FILIP1Q7Z7B0 1213 aa15.02■□□□□ -0
CPNE1-206ENST00000412056 USP37Q86T82 979 aa15.02■□□□□ -0
CPNE1-206ENST00000412056 SLC22A17Q8WUG5 538 aa15.02■□□□□ -0
CPNE1-206ENST00000412056 SYAP1Q96A49 352 aaPredicted RBP15.02■□□□□ -0
CPNE1-206ENST00000412056 HPDLQ96IR7 371 aa15.02■□□□□ -0
CPNE1-206ENST00000412056 CLSTN3Q9BQT9 956 aa15.02■□□□□ -0
CPNE1-206ENST00000412056 SRRTQ9BXP5 876 aaKnown RBP15.02■□□□□ -0
CPNE1-206ENST00000412056 MMRN2Q9H8L6 949 aa15.02■□□□□ -0
CPNE1-206ENST00000412056 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.02■□□□□ -0
CPNE1-206ENST00000412056 FNIP2Q9P278 1114 aa15.02■□□□□ -0
CPNE1-206ENST00000412056 DACH1Q9UI36 760 aa15.02■□□□□ -0
CPNE1-206ENST00000412056 HCFC2Q9Y5Z7 792 aa15.02■□□□□ -0
CPNE1-206ENST00000412056 CYB561D2O14569 222 aa15.01□□□□□ -0.01
CPNE1-206ENST00000412056 IKBKBO14920 756 aa15.01□□□□□ -0.01
CPNE1-206ENST00000412056 ADH1AP07327 375 aa15.01□□□□□ -0.01
CPNE1-206ENST00000412056 EPCAMP16422 314 aa15.01□□□□□ -0.01
CPNE1-206ENST00000412056 TYMPP19971 482 aa15.01□□□□□ -0.01
CPNE1-206ENST00000412056 PAX3P23760 479 aa15.01□□□□□ -0.01
CPNE1-206ENST00000412056 GCLMP48507 274 aa15.01□□□□□ -0.01
CPNE1-206ENST00000412056 NDUFV1P49821 464 aa15.01□□□□□ -0.01
CPNE1-206ENST00000412056 MCCD1P59942 119 aaPredicted RBP15.01□□□□□ -0.01
CPNE1-206ENST00000412056 MYL6P60660 151 aa15.01□□□□□ -0.01
CPNE1-206ENST00000412056 CREMQ03060 361 aa15.01□□□□□ -0.01
CPNE1-206ENST00000412056 DLX2Q07687 328 aaPredicted RBP15.01□□□□□ -0.01
CPNE1-206ENST00000412056 TRPC3Q13507 836 aa15.01□□□□□ -0.01
CPNE1-206ENST00000412056 KCNC3Q14003 757 aa15.01□□□□□ -0.01
CPNE1-206ENST00000412056 MRPL58Q14197 206 aaKnown RBP15.01□□□□□ -0.01
CPNE1-206ENST00000412056 STX1AQ16623 288 aa15.01□□□□□ -0.01
CPNE1-206ENST00000412056 CTC1Q2NKJ3 1217 aa15.01□□□□□ -0.01
CPNE1-206ENST00000412056 TCERG1LQ5VWI1 586 aa15.01□□□□□ -0.01
CPNE1-206ENST00000412056 PDXDC1Q6P996 788 aa15.01□□□□□ -0.01
CPNE1-206ENST00000412056 C15orf39Q6ZRI6 1047 aa15.01□□□□□ -0.01
CPNE1-206ENST00000412056 APPL2Q8NEU8 664 aa15.01□□□□□ -0.01
CPNE1-206ENST00000412056 ELMO3Q96BJ8 720 aa15.01□□□□□ -0.01
CPNE1-206ENST00000412056 PABPC5Q96DU9 382 aaKnown RBP15.01□□□□□ -0.01
CPNE1-206ENST00000412056 UBE2ZQ9H832 354 aaPredicted RBP15.01□□□□□ -0.01
CPNE1-206ENST00000412056 ARMCX3Q9UH62 379 aaPredicted RBP15.01□□□□□ -0.01
CPNE1-206ENST00000412056 BARX2Q9UMQ3 279 aaPredicted RBP15.01□□□□□ -0.01
CPNE1-206ENST00000412056 R3HCC1Q9Y3T6 440 aaKnown RBP15.01□□□□□ -0.01
CPNE1-206ENST00000412056 DOCK6Q96HP0 2047 aa15□□□□□ -0.01
CPNE1-206ENST00000412056 H7C4K7 107 aa15□□□□□ -0.01
CPNE1-206ENST00000412056 NCK2O43639 380 aa15□□□□□ -0.01
CPNE1-206ENST00000412056 SLC34A2O95436 690 aa15□□□□□ -0.01
CPNE1-206ENST00000412056 HLA-DRAP01903 254 aa15□□□□□ -0.01
CPNE1-206ENST00000412056 CYP11A1P05108 521 aa15□□□□□ -0.01
CPNE1-206ENST00000412056 ERCC5P28715 1186 aaPredicted RBP15□□□□□ -0.01
CPNE1-206ENST00000412056 LTBRP36941 435 aa15□□□□□ -0.01
CPNE1-206ENST00000412056 CLCN4P51793 760 aa15□□□□□ -0.01
CPNE1-206ENST00000412056 YWHAHQ04917 246 aaPredicted RBP15□□□□□ -0.01
CPNE1-206ENST00000412056 TYRO3Q06418 890 aa15□□□□□ -0.01
CPNE1-206ENST00000412056 MYO1EQ12965 1108 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms