RNA–Protein interactions for RNA: ENST00000409870.1

C2orf88-204, Transcript of chromosome 2 open reading frame 88, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C2orf88, Length 1,441 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf88-204ENST00000409870 LRRC52Q8N7C0 313 aa27.67■■■□□ 2.02
C2orf88-204ENST00000409870 SUSD3Q96L08 255 aa27.67■■■□□ 2.02
C2orf88-204ENST00000409870 ZNF560Q96MR9 790 aa27.67■■■□□ 2.02
C2orf88-204ENST00000409870 METTL14Q9HCE5 456 aaKnown RBP27.67■■■□□ 2.02
C2orf88-204ENST00000409870 AGAP1Q9UPQ3 857 aa27.67■■■□□ 2.02
C2orf88-204ENST00000409870 PCDHGC5Q9Y5F6 944 aa27.67■■■□□ 2.02
C2orf88-204ENST00000409870 I3L4J1 428 aa27.66■■■□□ 2.02
C2orf88-204ENST00000409870 GNA14O95837 355 aa27.66■■■□□ 2.02
C2orf88-204ENST00000409870 URODP06132 367 aa27.66■■■□□ 2.02
C2orf88-204ENST00000409870 PNPLA4P41247 253 aa27.66■■■□□ 2.02
C2orf88-204ENST00000409870 GLUD2P49448 558 aa27.66■■■□□ 2.02
C2orf88-204ENST00000409870 TAF6P49848 677 aa27.66■■■□□ 2.02
C2orf88-204ENST00000409870 RBP5P82980 135 aa27.66■■■□□ 2.02
C2orf88-204ENST00000409870 SMC1AQ14683 1233 aaKnown RBP27.66■■■□□ 2.02
C2orf88-204ENST00000409870 PLPP4Q5VZY2 271 aa27.66■■■□□ 2.02
C2orf88-204ENST00000409870 SCARA3Q6AZY7 606 aa27.66■■■□□ 2.02
C2orf88-204ENST00000409870 PABPC5Q96DU9 382 aaKnown RBP27.66■■■□□ 2.02
C2orf88-204ENST00000409870 IRAK3Q9Y616 596 aa27.66■■■□□ 2.02
C2orf88-204ENST00000409870 SYCE3A1L190 88 aa27.65■■■□□ 2.02
C2orf88-204ENST00000409870 SPTLC1O15269 473 aa27.65■■■□□ 2.02
C2orf88-204ENST00000409870 C4BPAP04003 597 aaKnown RBP27.65■■■□□ 2.02
C2orf88-204ENST00000409870 KRT19P08727 400 aa27.65■■■□□ 2.02
C2orf88-204ENST00000409870 FGFR3P22607 806 aa27.65■■■□□ 2.02
C2orf88-204ENST00000409870 MARSP56192 900 aaKnown RBP27.65■■■□□ 2.02
C2orf88-204ENST00000409870 DSG1Q02413 1049 aa27.65■■■□□ 2.02
C2orf88-204ENST00000409870 BMS1Q14692 1282 aaKnown RBP27.65■■■□□ 2.02
C2orf88-204ENST00000409870 COL19A1Q14993 1142 aa27.65■■■□□ 2.02
C2orf88-204ENST00000409870 PTPN14Q15678 1187 aa27.65■■■□□ 2.02
C2orf88-204ENST00000409870 ZACNQ401N2 412 aa27.65■■■□□ 2.02
C2orf88-204ENST00000409870 CCDC40Q4G0X9 1142 aa27.65■■■□□ 2.02
C2orf88-204ENST00000409870 RTP2Q5QGT7 225 aa27.65■■■□□ 2.02
C2orf88-204ENST00000409870 TDRD10Q5VZ19 366 aaKnown RBP27.65■■■□□ 2.02
C2orf88-204ENST00000409870 MICAL1Q8TDZ2 1067 aa27.65■■■□□ 2.02
C2orf88-204ENST00000409870 B3GALT6Q96L58 329 aa27.65■■■□□ 2.02
C2orf88-204ENST00000409870 FUCA2Q9BTY2 467 aa27.65■■■□□ 2.02
C2orf88-204ENST00000409870 DNAJC25Q9H1X3 360 aa27.65■■■□□ 2.02
C2orf88-204ENST00000409870 TSC2P49815 1807 aa27.64■■■□□ 2.02
C2orf88-204ENST00000409870 M0QZQ0 153 aa27.64■■■□□ 2.02
C2orf88-204ENST00000409870 PPP3CAQ08209 521 aa27.64■■■□□ 2.02
C2orf88-204ENST00000409870 SV2CQ496J9 727 aa27.64■■■□□ 2.02
C2orf88-204ENST00000409870 KIAA0319Q5VV43 1072 aa27.64■■■□□ 2.02
C2orf88-204ENST00000409870 C15orf39Q6ZRI6 1047 aa27.64■■■□□ 2.02
C2orf88-204ENST00000409870 GPR65Q8IYL9 337 aa27.64■■■□□ 2.02
C2orf88-204ENST00000409870 GADD45GIP1Q8TAE8 222 aaPredicted RBP27.64■■■□□ 2.02
C2orf88-204ENST00000409870 AUTS2Q8WXX7 1259 aa27.64■■■□□ 2.02
C2orf88-204ENST00000409870 TTPALQ9BTX7 342 aa27.64■■■□□ 2.02
C2orf88-204ENST00000409870 SYN3O14994 580 aa27.63■■■□□ 2.01
C2orf88-204ENST00000409870 CCDC192P0DO97 292 aa27.63■■■□□ 2.01
C2orf88-204ENST00000409870 GTF2H1P32780 548 aa27.63■■■□□ 2.01
C2orf88-204ENST00000409870 BIRC3Q13489 604 aa27.63■■■□□ 2.01
C2orf88-204ENST00000409870 TPD52L1Q16890 204 aaPredicted RBP27.63■■■□□ 2.01
C2orf88-204ENST00000409870 ZSCAN23Q3MJ62 389 aa27.63■■■□□ 2.01
C2orf88-204ENST00000409870 DCAF17Q5H9S7 520 aaPredicted RBP27.63■■■□□ 2.01
C2orf88-204ENST00000409870 KIAA1841Q6NSI8 718 aa27.63■■■□□ 2.01
C2orf88-204ENST00000409870 SV2AQ7L0J3 742 aa27.63■■■□□ 2.01
C2orf88-204ENST00000409870 MRPL43Q8N983 215 aaKnown RBP27.63■■■□□ 2.01
C2orf88-204ENST00000409870 ENOX1Q8TC92 643 aaKnown RBP27.63■■■□□ 2.01
C2orf88-204ENST00000409870 SLC35C1Q96A29 364 aa27.63■■■□□ 2.01
C2orf88-204ENST00000409870 MRPL17Q9NRX2 175 aaKnown RBP27.63■■■□□ 2.01
C2orf88-204ENST00000409870 PCDHB8Q9UN66 801 aa27.63■■■□□ 2.01
C2orf88-204ENST00000409870 SSX2IPQ9Y2D8 614 aa27.63■■■□□ 2.01
C2orf88-204ENST00000409870 R3HCC1Q9Y3T6 440 aaKnown RBP27.63■■■□□ 2.01
C2orf88-204ENST00000409870 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP27.62■■■□□ 2.01
C2orf88-204ENST00000409870 C2orf71A6NGG8 1288 aa27.62■■■□□ 2.01
C2orf88-204ENST00000409870 HIDE1A8MVS5 230 aa27.62■■■□□ 2.01
C2orf88-204ENST00000409870 H3BQ06 376 aaPredicted RBP27.62■■■□□ 2.01
C2orf88-204ENST00000409870 STX10O60499 249 aa27.62■■■□□ 2.01
C2orf88-204ENST00000409870 LILRB3O75022 631 aa27.62■■■□□ 2.01
C2orf88-204ENST00000409870 TKTP29401 623 aaKnown RBP27.62■■■□□ 2.01
C2orf88-204ENST00000409870 GCLMP48507 274 aa27.62■■■□□ 2.01
C2orf88-204ENST00000409870 TCERG1LQ5VWI1 586 aa27.62■■■□□ 2.01
C2orf88-204ENST00000409870 PTCRAQ6ISU1 281 aaPredicted RBP27.62■■■□□ 2.01
C2orf88-204ENST00000409870 EP400NLQ6ZTU2 488 aa27.62■■■□□ 2.01
C2orf88-204ENST00000409870 PIK3R5Q8WYR1 880 aa27.62■■■□□ 2.01
C2orf88-204ENST00000409870 THAP9Q9H5L6 903 aa27.62■■■□□ 2.01
C2orf88-204ENST00000409870 TMEM8AQ9HCN3 771 aa27.62■■■□□ 2.01
C2orf88-204ENST00000409870 CLDND1Q9NY35 253 aa27.62■■■□□ 2.01
C2orf88-204ENST00000409870 NCK2O43639 380 aa27.61■■■□□ 2.01
C2orf88-204ENST00000409870 PHACTR2O75167 634 aa27.61■■■□□ 2.01
C2orf88-204ENST00000409870 CXCL14O95715 111 aa27.61■■■□□ 2.01
C2orf88-204ENST00000409870 CST3P01034 146 aaPredicted RBP27.61■■■□□ 2.01
C2orf88-204ENST00000409870 DSTYKQ6XUX3 929 aa27.61■■■□□ 2.01
C2orf88-204ENST00000409870 ADGRD2Q7Z7M1 963 aa27.61■■■□□ 2.01
C2orf88-204ENST00000409870 CEP57Q86XR8 500 aa27.61■■■□□ 2.01
C2orf88-204ENST00000409870 IRF2BP1Q8IU81 584 aa27.61■■■□□ 2.01
C2orf88-204ENST00000409870 TRIM59Q8IWR1 403 aa27.61■■■□□ 2.01
C2orf88-204ENST00000409870 RIN2Q8WYP3 895 aaPredicted RBP27.61■■■□□ 2.01
C2orf88-204ENST00000409870 SENP8Q96LD8 212 aa27.61■■■□□ 2.01
C2orf88-204ENST00000409870 CNOT6LQ96LI5 555 aaKnown RBP27.61■■■□□ 2.01
C2orf88-204ENST00000409870 KPNA7A9QM74 516 aa27.6■■■□□ 2.01
C2orf88-204ENST00000409870 C2CD2LO14523 706 aa27.6■■■□□ 2.01
C2orf88-204ENST00000409870 VNN1O95497 513 aa27.6■■■□□ 2.01
C2orf88-204ENST00000409870 IL9P15248 144 aa27.6■■■□□ 2.01
C2orf88-204ENST00000409870 MYO1EQ12965 1108 aa27.6■■■□□ 2.01
C2orf88-204ENST00000409870 TRPC3Q13507 836 aa27.6■■■□□ 2.01
C2orf88-204ENST00000409870 NCOA4Q13772 614 aa27.6■■■□□ 2.01
C2orf88-204ENST00000409870 PUS10Q3MIT2 529 aaKnown RBP27.6■■■□□ 2.01
C2orf88-204ENST00000409870 ANO6Q4KMQ2 910 aa27.6■■■□□ 2.01
C2orf88-204ENST00000409870 PPP2R3CQ969Q6 453 aa27.6■■■□□ 2.01
C2orf88-204ENST00000409870 HPDLQ96IR7 371 aa27.6■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms