RNA–Protein interactions for RNA: ENST00000409796.5

LYSMD4-204, Transcript of LysM domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD4, Length 2,672 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-204ENST00000409796 EXTL3O43909 919 aa16.09■□□□□ 0.17
LYSMD4-204ENST00000409796 VNN1O95497 513 aa16.09■□□□□ 0.17
LYSMD4-204ENST00000409796 KLRC2P26717 231 aa16.09■□□□□ 0.17
LYSMD4-204ENST00000409796 NLRP11P59045 1033 aaKnown RBP16.09■□□□□ 0.17
LYSMD4-204ENST00000409796 RIPK1Q13546 671 aa16.09■□□□□ 0.17
LYSMD4-204ENST00000409796 PSMD6Q15008 389 aa16.09■□□□□ 0.17
LYSMD4-204ENST00000409796 TMEM63BQ5T3F8 832 aa16.09■□□□□ 0.17
LYSMD4-204ENST00000409796 SWSAP1Q6NVH7 229 aa16.09■□□□□ 0.17
LYSMD4-204ENST00000409796 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.09■□□□□ 0.17
LYSMD4-204ENST00000409796 MAGEB18Q96M61 343 aa16.09■□□□□ 0.17
LYSMD4-204ENST00000409796 FNBP1Q96RU3 617 aa16.09■□□□□ 0.17
LYSMD4-204ENST00000409796 SENP7Q9BQF6 1050 aa16.09■□□□□ 0.17
LYSMD4-204ENST00000409796 APOBEC3GQ9HC16 384 aaKnown RBP16.09■□□□□ 0.17
LYSMD4-204ENST00000409796 ZNF277Q9NRM2 450 aaPredicted RBP16.09■□□□□ 0.17
LYSMD4-204ENST00000409796 KLHL11Q9NVR0 708 aa16.09■□□□□ 0.17
LYSMD4-204ENST00000409796 EURLQ9NYK6 297 aa16.09■□□□□ 0.17
LYSMD4-204ENST00000409796 SEPT9Q9UHD8 586 aaPredicted RBP16.09■□□□□ 0.17
LYSMD4-204ENST00000409796 CTDP1Q9Y5B0 961 aaPredicted RBP16.09■□□□□ 0.17
LYSMD4-204ENST00000409796 IGF2BP3O00425 579 aaKnown RBP eCLIP16.08■□□□□ 0.16
LYSMD4-204ENST00000409796 ACOT2P49753 483 aa16.08■□□□□ 0.16
LYSMD4-204ENST00000409796 COPS2P61201 443 aa16.08■□□□□ 0.16
LYSMD4-204ENST00000409796 CLDN10P78369 228 aa16.08■□□□□ 0.16
LYSMD4-204ENST00000409796 SP4Q02446 784 aa16.08■□□□□ 0.16
LYSMD4-204ENST00000409796 BAATQ14032 418 aaPredicted RBP16.08■□□□□ 0.16
LYSMD4-204ENST00000409796 STAT4Q14765 748 aa16.08■□□□□ 0.16
LYSMD4-204ENST00000409796 R3HDM1Q15032 1099 aaKnown RBP16.08■□□□□ 0.16
LYSMD4-204ENST00000409796 P3H1Q32P28 736 aa16.08■□□□□ 0.16
LYSMD4-204ENST00000409796 CYP4F22Q6NT55 531 aa16.08■□□□□ 0.16
LYSMD4-204ENST00000409796 GSTA5Q7RTV2 222 aa16.08■□□□□ 0.16
LYSMD4-204ENST00000409796 FITM2Q8N6M3 262 aa16.08■□□□□ 0.16
LYSMD4-204ENST00000409796 RMDN2Q96LZ7 410 aa16.08■□□□□ 0.16
LYSMD4-204ENST00000409796 KIAA1683Q9H0B3 1180 aa16.08■□□□□ 0.16
LYSMD4-204ENST00000409796 POLR3FQ9H1D9 316 aaPredicted RBP16.08■□□□□ 0.16
LYSMD4-204ENST00000409796 NKIRAS1Q9NYS0 192 aa16.08■□□□□ 0.16
LYSMD4-204ENST00000409796 ARHGAP28Q9P2N2 729 aa16.08■□□□□ 0.16
LYSMD4-204ENST00000409796 RIPK3Q9Y572 518 aa16.08■□□□□ 0.16
LYSMD4-204ENST00000409796 PCDHB4Q9Y5E5 795 aa16.08■□□□□ 0.16
LYSMD4-204ENST00000409796 MYH9P35579 1960 aaKnown RBP16.08■□□□□ 0.16
LYSMD4-204ENST00000409796 GSTTP1A0A1W2PQM5 241 aa16.08■□□□□ 0.16
LYSMD4-204ENST00000409796 DGAT1O75907 488 aa16.08■□□□□ 0.16
LYSMD4-204ENST00000409796 FOXN2P32314 431 aa16.08■□□□□ 0.16
LYSMD4-204ENST00000409796 MAGEA4P43358 317 aa16.08■□□□□ 0.16
LYSMD4-204ENST00000409796 LIG4P49917 911 aa16.08■□□□□ 0.16
LYSMD4-204ENST00000409796 ALDH5A1P51649 535 aaPredicted RBP16.08■□□□□ 0.16
LYSMD4-204ENST00000409796 ZNF268Q14587 947 aaPredicted RBP16.08■□□□□ 0.16
LYSMD4-204ENST00000409796 TMED2Q15363 201 aa16.08■□□□□ 0.16
LYSMD4-204ENST00000409796 ATP13A4Q4VNC1 1196 aa16.08■□□□□ 0.16
LYSMD4-204ENST00000409796 TMEM270Q6UE05 265 aa16.08■□□□□ 0.16
LYSMD4-204ENST00000409796 ARHGEF18Q6ZSZ5 1173 aa16.08■□□□□ 0.16
LYSMD4-204ENST00000409796 RELL1Q8IUW5 271 aa16.08■□□□□ 0.16
LYSMD4-204ENST00000409796 ABRAQ8N0Z2 381 aa16.08■□□□□ 0.16
LYSMD4-204ENST00000409796 GLIS1Q8NBF1 620 aa16.08■□□□□ 0.16
LYSMD4-204ENST00000409796 MCPH1Q8NEM0 835 aa16.08■□□□□ 0.16
LYSMD4-204ENST00000409796 EXD1Q8NHP7 514 aa16.08■□□□□ 0.16
LYSMD4-204ENST00000409796 ATP6V0A1Q93050 837 aa16.08■□□□□ 0.16
LYSMD4-204ENST00000409796 WNK4Q96J92 1243 aa16.08■□□□□ 0.16
LYSMD4-204ENST00000409796 RBM15Q96T37 977 aaKnown RBP eCLIP16.08■□□□□ 0.16
LYSMD4-204ENST00000409796 CCDC77Q9BR77 488 aa16.08■□□□□ 0.16
LYSMD4-204ENST00000409796 TRIM6Q9C030 488 aaPredicted RBP16.08■□□□□ 0.16
LYSMD4-204ENST00000409796 PI4K2BG5E9Z4 385 aa16.07■□□□□ 0.16
LYSMD4-204ENST00000409796 NR3C2P08235 984 aa16.07■□□□□ 0.16
LYSMD4-204ENST00000409796 TAC1P20366 129 aa16.07■□□□□ 0.16
LYSMD4-204ENST00000409796 GNA15P30679 374 aa16.07■□□□□ 0.16
LYSMD4-204ENST00000409796 MGAT5Q09328 741 aa16.07■□□□□ 0.16
LYSMD4-204ENST00000409796 PLEKHA7Q6IQ23 1121 aa16.07■□□□□ 0.16
LYSMD4-204ENST00000409796 VSIG10LQ86VR7 867 aa16.07■□□□□ 0.16
LYSMD4-204ENST00000409796 KIF2BQ8N4N8 673 aa16.07■□□□□ 0.16
LYSMD4-204ENST00000409796 IFT74Q96LB3 600 aa16.07■□□□□ 0.16
LYSMD4-204ENST00000409796 ATP6V0A4Q9HBG4 840 aa16.07■□□□□ 0.16
LYSMD4-204ENST00000409796 MRPL47Q9HD33 250 aaKnown RBP16.07■□□□□ 0.16
LYSMD4-204ENST00000409796 HGSO14964 777 aaPredicted RBP16.07■□□□□ 0.16
LYSMD4-204ENST00000409796 TLR3O15455 904 aaKnown RBP16.07■□□□□ 0.16
LYSMD4-204ENST00000409796 ZBED4O75132 1171 aa16.07■□□□□ 0.16
LYSMD4-204ENST00000409796 KRT10P13645 584 aa16.07■□□□□ 0.16
LYSMD4-204ENST00000409796 KCNA2P16389 499 aa16.07■□□□□ 0.16
LYSMD4-204ENST00000409796 CCND2P30279 289 aa16.07■□□□□ 0.16
LYSMD4-204ENST00000409796 STRN3Q13033 797 aa16.07■□□□□ 0.16
LYSMD4-204ENST00000409796 MKRN3Q13064 507 aaKnown RBP16.07■□□□□ 0.16
LYSMD4-204ENST00000409796 CUL2Q13617 745 aa16.07■□□□□ 0.16
LYSMD4-204ENST00000409796 ACCSLQ4AC99 568 aa16.07■□□□□ 0.16
LYSMD4-204ENST00000409796 MIS18BP1Q6P0N0 1132 aa16.07■□□□□ 0.16
LYSMD4-204ENST00000409796 EGFL6Q8IUX8 553 aa16.07■□□□□ 0.16
LYSMD4-204ENST00000409796 CCDC60Q8IWA6 550 aaPredicted RBP16.07■□□□□ 0.16
LYSMD4-204ENST00000409796 ZCCHC9Q8N567 271 aaKnown RBP16.07■□□□□ 0.16
LYSMD4-204ENST00000409796 GBP7Q8N8V2 638 aaPredicted RBP16.07■□□□□ 0.16
LYSMD4-204ENST00000409796 MTMR14Q8NCE2 650 aa16.07■□□□□ 0.16
LYSMD4-204ENST00000409796 MAML1Q92585 1016 aa16.07■□□□□ 0.16
LYSMD4-204ENST00000409796 KLHL29Q96CT2 875 aa16.07■□□□□ 0.16
LYSMD4-204ENST00000409796 FHDC1Q9C0D6 1143 aaPredicted RBP16.07■□□□□ 0.16
LYSMD4-204ENST00000409796 RXFP1Q9HBX9 757 aa16.07■□□□□ 0.16
LYSMD4-204ENST00000409796 CYP26B1Q9NR63 512 aa16.07■□□□□ 0.16
LYSMD4-204ENST00000409796 ZNF541Q9H0D2 1346 aa16.07■□□□□ 0.16
LYSMD4-204ENST00000409796 RASA4BC9J798 803 aa16.06■□□□□ 0.16
LYSMD4-204ENST00000409796 RASA4O43374 803 aa16.06■□□□□ 0.16
LYSMD4-204ENST00000409796 ZSCAN5DPP0CG00 497 aa16.06■□□□□ 0.16
LYSMD4-204ENST00000409796 TCF4P15884 667 aa16.06■□□□□ 0.16
LYSMD4-204ENST00000409796 WDR4P57081 412 aaKnown RBP16.06■□□□□ 0.16
LYSMD4-204ENST00000409796 RTP1P59025 263 aa16.06■□□□□ 0.16
LYSMD4-204ENST00000409796 PRKCEQ02156 737 aa16.06■□□□□ 0.16
LYSMD4-204ENST00000409796 KAZNQ674X7 775 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms