RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 IFIT1BQ5T764 474 aaKnown RBP5.32□□□□□ -1.56
PMS1-203ENST00000409593 COLGALT2Q8IYK4 626 aa5.32□□□□□ -1.56
PMS1-203ENST00000409593 GRAMD1CQ8IYS0 662 aa5.32□□□□□ -1.56
PMS1-203ENST00000409593 PRR18Q8N4B5 295 aa5.32□□□□□ -1.56
PMS1-203ENST00000409593 PDPRQ8NCN5 879 aa5.32□□□□□ -1.56
PMS1-203ENST00000409593 TMEM125Q96AQ2 219 aa5.32□□□□□ -1.56
PMS1-203ENST00000409593 NACC2Q96BF6 587 aa5.32□□□□□ -1.56
PMS1-203ENST00000409593 MVB12AQ96EY5 273 aa5.32□□□□□ -1.56
PMS1-203ENST00000409593 AGAP2Q99490 1192 aa5.32□□□□□ -1.56
PMS1-203ENST00000409593 MAP3K14Q99558 947 aa5.32□□□□□ -1.56
PMS1-203ENST00000409593 C1orf43Q9BWL3 253 aa5.32□□□□□ -1.56
PMS1-203ENST00000409593 RHOBTB2Q9BYZ6 727 aa5.32□□□□□ -1.56
PMS1-203ENST00000409593 BRD9Q9H8M2 597 aa5.32□□□□□ -1.56
PMS1-203ENST00000409593 CASS4Q9NQ75 786 aa5.32□□□□□ -1.56
PMS1-203ENST00000409593 LMBRD1Q9NUN5 540 aa5.32□□□□□ -1.56
PMS1-203ENST00000409593 TBCCD1Q9NVR7 557 aa5.32□□□□□ -1.56
PMS1-203ENST00000409593 TRGV11A0A075B6L2 103 aa5.31□□□□□ -1.56
PMS1-203ENST00000409593 NT5C1B-RDH14C9J2C7 533 aa5.31□□□□□ -1.56
PMS1-203ENST00000409593 AKAP10O43572 662 aa5.31□□□□□ -1.56
PMS1-203ENST00000409593 OFD1O75665 1012 aa5.31□□□□□ -1.56
PMS1-203ENST00000409593 ARIH2O95376 493 aa5.31□□□□□ -1.56
PMS1-203ENST00000409593 EGR2P11161 476 aaPredicted RBP5.31□□□□□ -1.56
PMS1-203ENST00000409593 FDXRP22570 491 aa5.31□□□□□ -1.56
PMS1-203ENST00000409593 PHKA1P46020 1223 aa5.31□□□□□ -1.56
PMS1-203ENST00000409593 PIK3CGP48736 1102 aa5.31□□□□□ -1.56
PMS1-203ENST00000409593 MAP2K6P52564 334 aa5.31□□□□□ -1.56
PMS1-203ENST00000409593 VAV2P52735 878 aa5.31□□□□□ -1.56
PMS1-203ENST00000409593 NSUN7Q8NE18 718 aaKnown RBP5.31□□□□□ -1.56
PMS1-203ENST00000409593 JPH3Q8WXH2 748 aaPredicted RBP5.31□□□□□ -1.56
PMS1-203ENST00000409593 TNPO1Q92973 898 aaKnown RBP5.31□□□□□ -1.56
PMS1-203ENST00000409593 LRGUKQ96M69 825 aa5.31□□□□□ -1.56
PMS1-203ENST00000409593 RTFDC1Q9BY42 306 aaPredicted RBP5.31□□□□□ -1.56
PMS1-203ENST00000409593 SLITRK6Q9H5Y7 841 aa5.31□□□□□ -1.56
PMS1-203ENST00000409593 UNKLQ9H9P5 680 aaKnown RBP5.31□□□□□ -1.56
PMS1-203ENST00000409593 PACSIN3Q9UKS6 424 aa5.31□□□□□ -1.56
PMS1-203ENST00000409593 TOR1BO14657 336 aa5.31□□□□□ -1.56
PMS1-203ENST00000409593 RHOBTB3O94955 611 aa5.31□□□□□ -1.56
PMS1-203ENST00000409593 GJB1P08034 283 aa5.31□□□□□ -1.56
PMS1-203ENST00000409593 KCNA2P16389 499 aa5.31□□□□□ -1.56
PMS1-203ENST00000409593 PRDX5P30044 214 aa5.31□□□□□ -1.56
PMS1-203ENST00000409593 CYP2C19P33261 490 aa5.31□□□□□ -1.56
PMS1-203ENST00000409593 HK3P52790 923 aa5.31□□□□□ -1.56
PMS1-203ENST00000409593 EPHB1P54762 984 aa5.31□□□□□ -1.56
PMS1-203ENST00000409593 TAP1Q03518 808 aa5.31□□□□□ -1.56
PMS1-203ENST00000409593 PIGFQ07326 219 aa5.31□□□□□ -1.56
PMS1-203ENST00000409593 SCAPQ12770 1279 aa5.31□□□□□ -1.56
PMS1-203ENST00000409593 ZNF267Q14586 743 aaPredicted RBP5.31□□□□□ -1.56
PMS1-203ENST00000409593 CRB2Q5IJ48 1285 aa5.31□□□□□ -1.56
PMS1-203ENST00000409593 PCSK4Q6UW60 755 aa5.31□□□□□ -1.56
PMS1-203ENST00000409593 PTCD3Q96EY7 689 aaKnown RBP5.31□□□□□ -1.56
PMS1-203ENST00000409593 Q96MF0 132 aa5.31□□□□□ -1.56
PMS1-203ENST00000409593 WDCPQ9H6R7 721 aa5.31□□□□□ -1.56
PMS1-203ENST00000409593 TMEM74BQ9NUR3 256 aa5.31□□□□□ -1.56
PMS1-203ENST00000409593 SIDT1Q9NXL6 827 aaKnown RBP5.31□□□□□ -1.56
PMS1-203ENST00000409593 ZIM2Q9NZV7 527 aa5.31□□□□□ -1.56
PMS1-203ENST00000409593 CFAP97Q9P2B7 532 aa5.31□□□□□ -1.56
PMS1-203ENST00000409593 S100BP04271 92 aaPredicted RBP5.3□□□□□ -1.56
PMS1-203ENST00000409593 FTH1P19P0C7X4 201 aa5.3□□□□□ -1.56
PMS1-203ENST00000409593 ZNF135P52742 658 aaPredicted RBP5.3□□□□□ -1.56
PMS1-203ENST00000409593 BLOC1S1P78537 153 aa5.3□□□□□ -1.56
PMS1-203ENST00000409593 CLNKQ7Z7G1 428 aa5.3□□□□□ -1.56
PMS1-203ENST00000409593 CFAP52Q8N1V2 620 aa5.3□□□□□ -1.56
PMS1-203ENST00000409593 CAMKK1Q8N5S9 505 aa5.3□□□□□ -1.56
PMS1-203ENST00000409593 GPR150Q8NGU9 434 aa5.3□□□□□ -1.56
PMS1-203ENST00000409593 HPS3Q969F9 1004 aa5.3□□□□□ -1.56
PMS1-203ENST00000409593 TOR3AQ9H497 397 aa5.3□□□□□ -1.56
PMS1-203ENST00000409593 SYBUQ9NX95 663 aa5.3□□□□□ -1.56
PMS1-203ENST00000409593 PNMA8BQ9ULN7 279 aaPredicted RBP5.3□□□□□ -1.56
PMS1-203ENST00000409593 NR2E3Q9Y5X4 410 aa5.3□□□□□ -1.56
PMS1-203ENST00000409593 COL4A3Q01955 1670 aa5.3□□□□□ -1.56
PMS1-203ENST00000409593 CCDC195A0A1B0GUA6 201 aa5.29□□□□□ -1.56
PMS1-203ENST00000409593 MYADML2A6NDP7 307 aa5.29□□□□□ -1.56
PMS1-203ENST00000409593 E9PLN8 166 aa5.29□□□□□ -1.56
PMS1-203ENST00000409593 H3BUI4 141 aa5.29□□□□□ -1.56
PMS1-203ENST00000409593 AP1G1O43747 822 aa5.29□□□□□ -1.56
PMS1-203ENST00000409593 ANXA1P04083 346 aa5.29□□□□□ -1.56
PMS1-203ENST00000409593 SEC24CP53992 1094 aa5.29□□□□□ -1.56
PMS1-203ENST00000409593 FPGSQ05932 587 aa5.29□□□□□ -1.56
PMS1-203ENST00000409593 PLEKHG6Q3KR16 790 aa5.29□□□□□ -1.56
PMS1-203ENST00000409593 TAPT1Q6NXT6 567 aa5.29□□□□□ -1.56
PMS1-203ENST00000409593 TPH2Q8IWU9 490 aa5.29□□□□□ -1.56
PMS1-203ENST00000409593 SSH3Q8TE77 659 aa5.29□□□□□ -1.56
PMS1-203ENST00000409593 COQ10AQ96MF6 247 aa5.29□□□□□ -1.56
PMS1-203ENST00000409593 TRIB1Q96RU8 372 aa5.29□□□□□ -1.56
PMS1-203ENST00000409593 SMOQ99835 787 aa5.29□□□□□ -1.56
PMS1-203ENST00000409593 VKORC1Q9BQB6 163 aa5.29□□□□□ -1.56
PMS1-203ENST00000409593 PNPOQ9NVS9 261 aa5.29□□□□□ -1.56
PMS1-203ENST00000409593 PCDHA1Q9Y5I3 950 aa5.29□□□□□ -1.56
PMS1-203ENST00000409593 PRAMEF33A0A0G2JMD5 474 aa5.28□□□□□ -1.56
PMS1-203ENST00000409593 POLRMTO00411 1230 aaKnown RBP5.28□□□□□ -1.56
PMS1-203ENST00000409593 SUV39H1O43463 412 aa5.28□□□□□ -1.56
PMS1-203ENST00000409593 PRAMEF10O60809 474 aa5.28□□□□□ -1.56
PMS1-203ENST00000409593 TYRP14679 529 aa5.28□□□□□ -1.56
PMS1-203ENST00000409593 TGM1P22735 817 aa5.28□□□□□ -1.56
PMS1-203ENST00000409593 PROZP22891 400 aa5.28□□□□□ -1.56
PMS1-203ENST00000409593 MC2RQ01718 297 aa5.28□□□□□ -1.56
PMS1-203ENST00000409593 MPP3Q13368 585 aa5.28□□□□□ -1.56
PMS1-203ENST00000409593 CD300EQ496F6 205 aaPredicted RBP5.28□□□□□ -1.56
PMS1-203ENST00000409593 ATAT1Q5SQI0 421 aa5.28□□□□□ -1.56
PMS1-203ENST00000409593 SLC30A10Q6XR72 485 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms