RNA–Protein interactions for RNA: ENST00000409570.3

SCRN1-203, Transcript of secernin 1, humanhuman

TSL 4 BASIC

Gene SCRN1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-203ENST00000409570 CSGALNACT1Q8TDX6 532 aa18.49■□□□□ 0.55
SCRN1-203ENST00000409570 MSANTD3Q96H12 275 aa18.49■□□□□ 0.55
SCRN1-203ENST00000409570 TBC1D32Q96NH3 1257 aa18.49■□□□□ 0.55
SCRN1-203ENST00000409570 ACAP3Q96P50 834 aa18.49■□□□□ 0.55
SCRN1-203ENST00000409570 TARS2Q9BW92 718 aaKnown RBP18.49■□□□□ 0.55
SCRN1-203ENST00000409570 LRRC3Q9BY71 257 aa18.49■□□□□ 0.55
SCRN1-203ENST00000409570 MRPL4Q9BYD3 311 aaKnown RBP18.49■□□□□ 0.55
SCRN1-203ENST00000409570 TMEM134Q9H6X4 195 aa18.49■□□□□ 0.55
SCRN1-203ENST00000409570 C2orf42Q9NWW7 574 aa18.49■□□□□ 0.55
SCRN1-203ENST00000409570 CCDC169A6NNP5 214 aa18.48■□□□□ 0.55
SCRN1-203ENST00000409570 CHADO15335 359 aa18.48■□□□□ 0.55
SCRN1-203ENST00000409570 VNN2O95498 520 aa18.48■□□□□ 0.55
SCRN1-203ENST00000409570 PROZP22891 400 aa18.48■□□□□ 0.55
SCRN1-203ENST00000409570 MCM4P33991 863 aa18.48■□□□□ 0.55
SCRN1-203ENST00000409570 CCT6AP40227 531 aaKnown RBP18.48■□□□□ 0.55
SCRN1-203ENST00000409570 NPTX2P47972 431 aa18.48■□□□□ 0.55
SCRN1-203ENST00000409570 SOX9P48436 509 aa18.48■□□□□ 0.55
SCRN1-203ENST00000409570 PEX3P56589 373 aa18.48■□□□□ 0.55
SCRN1-203ENST00000409570 LRRC32Q14392 662 aa18.48■□□□□ 0.55
SCRN1-203ENST00000409570 ZNF174Q15697 407 aa18.48■□□□□ 0.55
SCRN1-203ENST00000409570 HAUS3Q68CZ6 603 aa18.48■□□□□ 0.55
SCRN1-203ENST00000409570 Q6ZS52 159 aa18.48■□□□□ 0.55
SCRN1-203ENST00000409570 LONP2Q86WA8 852 aa18.48■□□□□ 0.55
SCRN1-203ENST00000409570 DAW1Q8N136 415 aa18.48■□□□□ 0.55
SCRN1-203ENST00000409570 APPL2Q8NEU8 664 aa18.48■□□□□ 0.55
SCRN1-203ENST00000409570 BEST2Q8NFU1 509 aa18.48■□□□□ 0.55
SCRN1-203ENST00000409570 E2F7Q96AV8 911 aa18.48■□□□□ 0.55
SCRN1-203ENST00000409570 GPR88Q9GZN0 384 aa18.48■□□□□ 0.55
SCRN1-203ENST00000409570 C8orf33Q9H7E9 229 aaPredicted RBP18.48■□□□□ 0.55
SCRN1-203ENST00000409570 ARHGAP28Q9P2N2 729 aa18.48■□□□□ 0.55
SCRN1-203ENST00000409570 YIPF1Q9Y548 306 aa18.48■□□□□ 0.55
SCRN1-203ENST00000409570 SLC38A8A6NNN8 435 aa18.47■□□□□ 0.55
SCRN1-203ENST00000409570 MCF2P10911 925 aa18.47■□□□□ 0.55
SCRN1-203ENST00000409570 CPB1P15086 417 aa18.47■□□□□ 0.55
SCRN1-203ENST00000409570 HOXC13P31276 330 aa18.47■□□□□ 0.55
SCRN1-203ENST00000409570 FCHO2Q0JRZ9 810 aa18.47■□□□□ 0.55
SCRN1-203ENST00000409570 HEATR6Q6AI08 1181 aaKnown RBP18.47■□□□□ 0.55
SCRN1-203ENST00000409570 C1orf228Q6PIY5 440 aa18.47■□□□□ 0.55
SCRN1-203ENST00000409570 TXNDC11Q6PKC3 985 aa18.47■□□□□ 0.55
SCRN1-203ENST00000409570 TMC8Q8IU68 726 aa18.47■□□□□ 0.55
SCRN1-203ENST00000409570 YAF2Q8IY57 180 aa18.47■□□□□ 0.55
SCRN1-203ENST00000409570 FAM160A2Q8N612 972 aaPredicted RBP18.47■□□□□ 0.55
SCRN1-203ENST00000409570 CHAMP1Q96JM3 812 aa18.47■□□□□ 0.55
SCRN1-203ENST00000409570 DNAJC25Q9H1X3 360 aa18.47■□□□□ 0.55
SCRN1-203ENST00000409570 SLITRK6Q9H5Y7 841 aa18.47■□□□□ 0.55
SCRN1-203ENST00000409570 PCDHB8Q9UN66 801 aa18.47■□□□□ 0.55
SCRN1-203ENST00000409570 A0A1W2PRU2 124 aa18.46■□□□□ 0.55
SCRN1-203ENST00000409570 MYBPHLA2RUH7 354 aa18.46■□□□□ 0.55
SCRN1-203ENST00000409570 KPNA1P52294 538 aaPredicted RBP18.46■□□□□ 0.55
SCRN1-203ENST00000409570 GUCY1B3Q02153 619 aa18.46■□□□□ 0.55
SCRN1-203ENST00000409570 ORC2Q13416 577 aaPredicted RBP18.46■□□□□ 0.55
SCRN1-203ENST00000409570 SLC10A6Q3KNW5 377 aa18.46■□□□□ 0.55
SCRN1-203ENST00000409570 MPZL3Q6UWV2 235 aa18.46■□□□□ 0.55
SCRN1-203ENST00000409570 GPIHBP1Q8IV16 184 aa18.46■□□□□ 0.55
SCRN1-203ENST00000409570 TMEM130Q8N3G9 435 aa18.46■□□□□ 0.55
SCRN1-203ENST00000409570 ZBTB45Q96K62 511 aaPredicted RBP18.46■□□□□ 0.55
SCRN1-203ENST00000409570 LRRC3BQ96PB8 259 aa18.46■□□□□ 0.55
SCRN1-203ENST00000409570 TCHPQ9BT92 498 aa18.46■□□□□ 0.55
SCRN1-203ENST00000409570 CRISPLD1Q9H336 500 aa18.46■□□□□ 0.55
SCRN1-203ENST00000409570 KIAA1024Q9UPX6 916 aa18.46■□□□□ 0.55
SCRN1-203ENST00000409570 SPECC1L-ADORA2AF8WAN1 911 aa18.45■□□□□ 0.54
SCRN1-203ENST00000409570 HIP1RO75146 1068 aa18.45■□□□□ 0.54
SCRN1-203ENST00000409570 OR4Q2P0C623 313 aa18.45■□□□□ 0.54
SCRN1-203ENST00000409570 CTHP32929 405 aa18.45■□□□□ 0.54
SCRN1-203ENST00000409570 ANAPC15P60006 121 aa18.45■□□□□ 0.54
SCRN1-203ENST00000409570 ST3GAL1Q11201 340 aa18.45■□□□□ 0.54
SCRN1-203ENST00000409570 DGKKQ5KSL6 1271 aa18.45■□□□□ 0.54
SCRN1-203ENST00000409570 STXBP5Q5T5C0 1151 aa18.45■□□□□ 0.54
SCRN1-203ENST00000409570 MKNK1Q9BUB5 465 aa18.45■□□□□ 0.54
SCRN1-203ENST00000409570 DDX19AQ9NUU7 478 aaKnown RBP18.45■□□□□ 0.54
SCRN1-203ENST00000409570 TUBGCP4Q9UGJ1 667 aa18.45■□□□□ 0.54
SCRN1-203ENST00000409570 CEP295Q9C0D2 2601 aa18.45■□□□□ 0.54
SCRN1-203ENST00000409570 TSC2P49815 1807 aa18.44■□□□□ 0.54
SCRN1-203ENST00000409570 M0QZQ0 153 aa18.44■□□□□ 0.54
SCRN1-203ENST00000409570 FOXD2O60548 495 aaPredicted RBP18.44■□□□□ 0.54
SCRN1-203ENST00000409570 OAZ2O95190 189 aa18.44■□□□□ 0.54
SCRN1-203ENST00000409570 HARSP12081 509 aaKnown RBP18.44■□□□□ 0.54
SCRN1-203ENST00000409570 MARCKSP29966 332 aaPredicted RBP18.44■□□□□ 0.54
SCRN1-203ENST00000409570 HOXA6P31267 233 aa18.44■□□□□ 0.54
SCRN1-203ENST00000409570 FXR2P51116 673 aaKnown RBP eCLIP18.44■□□□□ 0.54
SCRN1-203ENST00000409570 MAPK7Q13164 816 aa18.44■□□□□ 0.54
SCRN1-203ENST00000409570 DMP1Q13316 513 aaPredicted RBP18.44■□□□□ 0.54
SCRN1-203ENST00000409570 SEZ6Q53EL9 994 aa18.44■□□□□ 0.54
SCRN1-203ENST00000409570 CEP68Q76N32 757 aa18.44■□□□□ 0.54
SCRN1-203ENST00000409570 WDR5BQ86VZ2 330 aa18.44■□□□□ 0.54
SCRN1-203ENST00000409570 RALGPS2Q86X27 583 aaPredicted RBP18.44■□□□□ 0.54
SCRN1-203ENST00000409570 ARID3BQ8IVW6 561 aaPredicted RBP18.44■□□□□ 0.54
SCRN1-203ENST00000409570 C4orf32Q8N8J7 132 aa18.44■□□□□ 0.54
SCRN1-203ENST00000409570 TTC8Q8TAM2 541 aa18.44■□□□□ 0.54
SCRN1-203ENST00000409570 DDX1Q92499 740 aaKnown RBP18.44■□□□□ 0.54
SCRN1-203ENST00000409570 PGLYRP2Q96PD5 576 aa18.44■□□□□ 0.54
SCRN1-203ENST00000409570 KMT5AQ9NQR1 393 aa18.44■□□□□ 0.54
SCRN1-203ENST00000409570 GTSE1Q9NYZ3 720 aa18.44■□□□□ 0.54
SCRN1-203ENST00000409570 TIMM13Q9Y5L4 95 aaPredicted RBP18.44■□□□□ 0.54
SCRN1-203ENST00000409570 LAMA1P25391 3075 aa18.44■□□□□ 0.54
SCRN1-203ENST00000409570 FRYQ5TBA9 3013 aa18.43■□□□□ 0.54
SCRN1-203ENST00000409570 LIMK1P53667 647 aa18.43■□□□□ 0.54
SCRN1-203ENST00000409570 YWHAHQ04917 246 aaPredicted RBP18.43■□□□□ 0.54
SCRN1-203ENST00000409570 DUSP4Q13115 394 aa18.43■□□□□ 0.54
SCRN1-203ENST00000409570 PLD1Q13393 1074 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms