RNA–Protein interactions for RNA: ENST00000409116.5

SNRNP27-202, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 5 BASIC

Gene SNRNP27, Length 1,339 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-202ENST00000409116 PRDM12Q9H4Q4 367 aa16.3■□□□□ 0.2
SNRNP27-202ENST00000409116 R3HCC1Q9Y3T6 440 aaKnown RBP16.3■□□□□ 0.2
SNRNP27-202ENST00000409116 SCN1AP35498 2009 aa16.29■□□□□ 0.2
SNRNP27-202ENST00000409116 PES1O00541 588 aaKnown RBP16.29■□□□□ 0.2
SNRNP27-202ENST00000409116 LRRN2O75325 713 aa16.29■□□□□ 0.2
SNRNP27-202ENST00000409116 EFEMP2O95967 443 aa16.29■□□□□ 0.2
SNRNP27-202ENST00000409116 PRKCSHP14314 528 aaPredicted RBP16.29■□□□□ 0.2
SNRNP27-202ENST00000409116 EEF1GP26641 437 aaKnown RBP16.29■□□□□ 0.2
SNRNP27-202ENST00000409116 PNPLA4P41247 253 aa16.29■□□□□ 0.2
SNRNP27-202ENST00000409116 AARSP49588 968 aaKnown RBP eCLIP16.29■□□□□ 0.2
SNRNP27-202ENST00000409116 TAF6P49848 677 aa16.29■□□□□ 0.2
SNRNP27-202ENST00000409116 FXR1P51114 621 aaKnown RBP eCLIP16.29■□□□□ 0.2
SNRNP27-202ENST00000409116 MAN2A1Q16706 1144 aa16.29■□□□□ 0.2
SNRNP27-202ENST00000409116 SV2CQ496J9 727 aa16.29■□□□□ 0.2
SNRNP27-202ENST00000409116 FAM171A1Q5VUB5 890 aa16.29■□□□□ 0.2
SNRNP27-202ENST00000409116 KRT39Q6A163 491 aa16.29■□□□□ 0.2
SNRNP27-202ENST00000409116 DDX53Q86TM3 631 aaKnown RBP16.29■□□□□ 0.2
SNRNP27-202ENST00000409116 VPS52Q8N1B4 723 aa16.29■□□□□ 0.2
SNRNP27-202ENST00000409116 POF1BQ8WVV4 589 aa16.29■□□□□ 0.2
SNRNP27-202ENST00000409116 SEMA4DQ92854 862 aa16.29■□□□□ 0.2
SNRNP27-202ENST00000409116 PI4K2AQ9BTU6 479 aa16.29■□□□□ 0.2
SNRNP27-202ENST00000409116 XYLT2Q9H1B5 865 aa16.29■□□□□ 0.2
SNRNP27-202ENST00000409116 PCDHGC5Q9Y5F6 944 aa16.29■□□□□ 0.2
SNRNP27-202ENST00000409116 KPNA7A9QM74 516 aa16.28■□□□□ 0.2
SNRNP27-202ENST00000409116 LPXNO60711 386 aa16.28■□□□□ 0.2
SNRNP27-202ENST00000409116 CLSTN1O94985 981 aa16.28■□□□□ 0.2
SNRNP27-202ENST00000409116 CDK11BP21127 795 aaKnown RBP16.28■□□□□ 0.2
SNRNP27-202ENST00000409116 TKTP29401 623 aaKnown RBP16.28■□□□□ 0.2
SNRNP27-202ENST00000409116 CAMK1Q14012 370 aa16.28■□□□□ 0.2
SNRNP27-202ENST00000409116 ZNF699Q32M78 642 aa16.28■□□□□ 0.2
SNRNP27-202ENST00000409116 VWA3BQ502W6 1294 aa16.28■□□□□ 0.2
SNRNP27-202ENST00000409116 MIIPQ5JXC2 388 aa16.28■□□□□ 0.2
SNRNP27-202ENST00000409116 DSTYKQ6XUX3 929 aa16.28■□□□□ 0.2
SNRNP27-202ENST00000409116 AUTS2Q8WXX7 1259 aa16.28■□□□□ 0.2
SNRNP27-202ENST00000409116 SUSD3Q96L08 255 aa16.28■□□□□ 0.2
SNRNP27-202ENST00000409116 SENP8Q96LD8 212 aa16.28■□□□□ 0.2
SNRNP27-202ENST00000409116 HERC2P3Q9BVR0 1158 aa16.28■□□□□ 0.2
SNRNP27-202ENST00000409116 VPS16Q9H269 839 aa16.28■□□□□ 0.2
SNRNP27-202ENST00000409116 PUF60Q9UHX1 559 aaKnown RBP16.28■□□□□ 0.2
SNRNP27-202ENST00000409116 LZTS1Q9Y250 596 aa16.28■□□□□ 0.2
SNRNP27-202ENST00000409116 GOLGA6L19H0YKK7 550 aa16.27■□□□□ 0.2
SNRNP27-202ENST00000409116 TRAPPC3O43617 180 aa16.27■□□□□ 0.2
SNRNP27-202ENST00000409116 SOD2P04179 222 aa16.27■□□□□ 0.2
SNRNP27-202ENST00000409116 ERVFC1P60507 584 aa16.27■□□□□ 0.2
SNRNP27-202ENST00000409116 UBE3AQ05086 875 aa16.27■□□□□ 0.2
SNRNP27-202ENST00000409116 MYO1EQ12965 1108 aa16.27■□□□□ 0.2
SNRNP27-202ENST00000409116 SPOPLQ6IQ16 392 aa16.27■□□□□ 0.2
SNRNP27-202ENST00000409116 TMC7Q7Z402 723 aa16.27■□□□□ 0.2
SNRNP27-202ENST00000409116 CEP57Q86XR8 500 aa16.27■□□□□ 0.2
SNRNP27-202ENST00000409116 RNF168Q8IYW5 571 aaPredicted RBP16.27■□□□□ 0.2
SNRNP27-202ENST00000409116 FBXL13Q8NEE6 735 aa16.27■□□□□ 0.2
SNRNP27-202ENST00000409116 ZBP1Q9H171 429 aa16.27■□□□□ 0.2
SNRNP27-202ENST00000409116 NDST4Q9H3R1 872 aa16.27■□□□□ 0.2
SNRNP27-202ENST00000409116 ENTPD7Q9NQZ7 604 aa16.27■□□□□ 0.2
SNRNP27-202ENST00000409116 TLR9Q9NR96 1032 aa16.27■□□□□ 0.2
SNRNP27-202ENST00000409116 NXF1Q9UBU9 619 aaKnown RBP16.27■□□□□ 0.2
SNRNP27-202ENST00000409116 LIMA1Q9UHB6 759 aaKnown RBP16.27■□□□□ 0.2
SNRNP27-202ENST00000409116 POLIQ9UNA4 740 aa16.27■□□□□ 0.2
SNRNP27-202ENST00000409116 TIMM13Q9Y5L4 95 aaPredicted RBP16.27■□□□□ 0.2
SNRNP27-202ENST00000409116 SNX9Q9Y5X1 595 aa16.27■□□□□ 0.2
SNRNP27-202ENST00000409116 EYSQ5T1H1 3165 aa16.26■□□□□ 0.19
SNRNP27-202ENST00000409116 M0QZQ0 153 aa16.26■□□□□ 0.19
SNRNP27-202ENST00000409116 C2CD2LO14523 706 aa16.26■□□□□ 0.19
SNRNP27-202ENST00000409116 CYB561D2O14569 222 aa16.26■□□□□ 0.19
SNRNP27-202ENST00000409116 N4BP1O75113 896 aaKnown RBP16.26■□□□□ 0.19
SNRNP27-202ENST00000409116 ASS1P00966 412 aaKnown RBP16.26■□□□□ 0.19
SNRNP27-202ENST00000409116 FGFR3P22607 806 aa16.26■□□□□ 0.19
SNRNP27-202ENST00000409116 ATICP31939 592 aa16.26■□□□□ 0.19
SNRNP27-202ENST00000409116 CA8P35219 290 aa16.26■□□□□ 0.19
SNRNP27-202ENST00000409116 IRS1P35568 1242 aa16.26■□□□□ 0.19
SNRNP27-202ENST00000409116 COPB1P53618 953 aaKnown RBP16.26■□□□□ 0.19
SNRNP27-202ENST00000409116 ELAVL2Q12926 359 aaKnown RBP16.26■□□□□ 0.19
SNRNP27-202ENST00000409116 SGSM1Q2NKQ1 1148 aa16.26■□□□□ 0.19
SNRNP27-202ENST00000409116 USP41Q3LFD5 358 aa16.26■□□□□ 0.19
SNRNP27-202ENST00000409116 WDR72Q3MJ13 1102 aa16.26■□□□□ 0.19
SNRNP27-202ENST00000409116 RTP2Q5QGT7 225 aa16.26■□□□□ 0.19
SNRNP27-202ENST00000409116 PLPP4Q5VZY2 271 aa16.26■□□□□ 0.19
SNRNP27-202ENST00000409116 SCARA5Q6ZMJ2 495 aa16.26■□□□□ 0.19
SNRNP27-202ENST00000409116 APTXQ7Z2E3 356 aaKnown RBP16.26■□□□□ 0.19
SNRNP27-202ENST00000409116 ANKRD20A12PQ8NF67 263 aa16.26■□□□□ 0.19
SNRNP27-202ENST00000409116 TCF25Q9BQ70 676 aa16.26■□□□□ 0.19
SNRNP27-202ENST00000409116 CRACR2AQ9BSW2 395 aa16.26■□□□□ 0.19
SNRNP27-202ENST00000409116 TTPALQ9BTX7 342 aa16.26■□□□□ 0.19
SNRNP27-202ENST00000409116 APOBEC3GQ9HC16 384 aaKnown RBP16.26■□□□□ 0.19
SNRNP27-202ENST00000409116 RAB20Q9NX57 234 aa16.26■□□□□ 0.19
SNRNP27-202ENST00000409116 GDAP2Q9NXN4 497 aa16.26■□□□□ 0.19
SNRNP27-202ENST00000409116 PCDHB8Q9UN66 801 aa16.26■□□□□ 0.19
SNRNP27-202ENST00000409116 COQ4Q9Y3A0 265 aa16.26■□□□□ 0.19
SNRNP27-202ENST00000409116 PMM2O15305 246 aa16.25■□□□□ 0.19
SNRNP27-202ENST00000409116 STAU1O95793 577 aaKnown RBP16.25■□□□□ 0.19
SNRNP27-202ENST00000409116 URODP06132 367 aa16.25■□□□□ 0.19
SNRNP27-202ENST00000409116 ODC1P11926 461 aa16.25■□□□□ 0.19
SNRNP27-202ENST00000409116 PAX3P23760 479 aa16.25■□□□□ 0.19
SNRNP27-202ENST00000409116 GLUD2P49448 558 aa16.25■□□□□ 0.19
SNRNP27-202ENST00000409116 TNNC1P63316 161 aa16.25■□□□□ 0.19
SNRNP27-202ENST00000409116 TPM4P67936 248 aa16.25■□□□□ 0.19
SNRNP27-202ENST00000409116 NOP14P78316 857 aaKnown RBP16.25■□□□□ 0.19
SNRNP27-202ENST00000409116 KIAA1841Q6NSI8 718 aa16.25■□□□□ 0.19
SNRNP27-202ENST00000409116 GPR153Q6NV75 609 aa16.25■□□□□ 0.19
SNRNP27-202ENST00000409116 PRSS55Q6UWB4 352 aaPredicted RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms