RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 SPTLC1O15269 473 aa5.28□□□□□ -1.56
SCN3A-203ENST00000409101 DDHD2O94830 711 aa5.28□□□□□ -1.56
SCN3A-203ENST00000409101 ASS1P00966 412 aaKnown RBP5.28□□□□□ -1.56
SCN3A-203ENST00000409101 LGALS2P05162 132 aa5.28□□□□□ -1.56
SCN3A-203ENST00000409101 HIST1H2AGP0C0S8 130 aaPredicted RBP5.28□□□□□ -1.56
SCN3A-203ENST00000409101 WEE2P0C1S8 567 aa5.28□□□□□ -1.56
SCN3A-203ENST00000409101 SMIM10L2AP0DMW4 78 aa5.28□□□□□ -1.56
SCN3A-203ENST00000409101 SMIM10L2BP0DMW5 78 aa5.28□□□□□ -1.56
SCN3A-203ENST00000409101 ELNP15502 786 aa5.28□□□□□ -1.56
SCN3A-203ENST00000409101 HIST1H2ADP20671 130 aa5.28□□□□□ -1.56
SCN3A-203ENST00000409101 IL9RQ01113 521 aa5.28□□□□□ -1.56
SCN3A-203ENST00000409101 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.28□□□□□ -1.56
SCN3A-203ENST00000409101 DCAF6Q58WW2 860 aa5.28□□□□□ -1.56
SCN3A-203ENST00000409101 SPRYD7Q5W111 196 aa5.28□□□□□ -1.56
SCN3A-203ENST00000409101 CXCL17Q6UXB2 119 aa5.28□□□□□ -1.56
SCN3A-203ENST00000409101 PTF1AQ7RTS3 328 aa5.28□□□□□ -1.56
SCN3A-203ENST00000409101 ADGRA1Q86SQ6 560 aa5.28□□□□□ -1.56
SCN3A-203ENST00000409101 HIST1H2AHQ96KK5 128 aa5.28□□□□□ -1.56
SCN3A-203ENST00000409101 PANX2Q96RD6 677 aa5.28□□□□□ -1.56
SCN3A-203ENST00000409101 HIST1H2AJQ99878 128 aa5.28□□□□□ -1.56
SCN3A-203ENST00000409101 H2AFJQ9BTM1 129 aa5.28□□□□□ -1.56
SCN3A-203ENST00000409101 CCSER1Q9C0I3 900 aa5.28□□□□□ -1.56
SCN3A-203ENST00000409101 RNF14Q9UBS8 474 aa5.28□□□□□ -1.56
SCN3A-203ENST00000409101 SYNPO2Q9UMS6 1093 aa5.28□□□□□ -1.56
SCN3A-203ENST00000409101 ITIH6Q6UXX5 1313 aa5.28□□□□□ -1.56
SCN3A-203ENST00000409101 FAM47DPA6NHR8 397 aa5.28□□□□□ -1.56
SCN3A-203ENST00000409101 SOWAHDA6NJG2 315 aa5.28□□□□□ -1.56
SCN3A-203ENST00000409101 C3orf70A6NLC5 250 aaPredicted RBP5.28□□□□□ -1.56
SCN3A-203ENST00000409101 RTN2O75298 545 aa5.28□□□□□ -1.56
SCN3A-203ENST00000409101 ALDH1A2O94788 518 aa5.28□□□□□ -1.56
SCN3A-203ENST00000409101 MCF2P10911 925 aa5.28□□□□□ -1.56
SCN3A-203ENST00000409101 ACRBPQ8NEB7 543 aa5.28□□□□□ -1.56
SCN3A-203ENST00000409101 FBXO22Q8NEZ5 403 aa5.28□□□□□ -1.56
SCN3A-203ENST00000409101 ACSF2Q96CM8 615 aaPredicted RBP5.28□□□□□ -1.56
SCN3A-203ENST00000409101 DDX4Q9NQI0 724 aaKnown RBP5.28□□□□□ -1.56
SCN3A-203ENST00000409101 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.28□□□□□ -1.56
SCN3A-203ENST00000409101 SENP1Q9P0U3 644 aa5.28□□□□□ -1.56
SCN3A-203ENST00000409101 SLC30A1Q9Y6M5 507 aa5.28□□□□□ -1.56
SCN3A-203ENST00000409101 RIC1Q4ADV7 1423 aa5.28□□□□□ -1.56
SCN3A-203ENST00000409101 GPD1P21695 349 aa5.28□□□□□ -1.56
SCN3A-203ENST00000409101 SLC1A1P43005 524 aa5.28□□□□□ -1.56
SCN3A-203ENST00000409101 ANTXR2P58335 489 aa5.28□□□□□ -1.56
SCN3A-203ENST00000409101 CCDC144BQ3MJ40 725 aa5.28□□□□□ -1.56
SCN3A-203ENST00000409101 SLC45A4Q5BKX6 768 aa5.28□□□□□ -1.56
SCN3A-203ENST00000409101 MDH1BQ5I0G3 518 aa5.28□□□□□ -1.56
SCN3A-203ENST00000409101 CELF3Q5SZQ8 465 aaKnown RBP5.28□□□□□ -1.56
SCN3A-203ENST00000409101 B4GALNT4Q76KP1 1039 aa5.28□□□□□ -1.56
SCN3A-203ENST00000409101 KSR1Q8IVT5 923 aa5.28□□□□□ -1.56
SCN3A-203ENST00000409101 MFN1Q8IWA4 741 aa5.28□□□□□ -1.56
SCN3A-203ENST00000409101 SLC35F6Q8N357 371 aa5.28□□□□□ -1.56
SCN3A-203ENST00000409101 TEKT4Q8WW24 435 aa5.28□□□□□ -1.56
SCN3A-203ENST00000409101 CPA5Q8WXQ8 436 aa5.28□□□□□ -1.56
SCN3A-203ENST00000409101 USP13Q92995 863 aaPredicted RBP5.28□□□□□ -1.56
SCN3A-203ENST00000409101 ADAM2Q99965 735 aa5.28□□□□□ -1.56
SCN3A-203ENST00000409101 AP1M1Q9BXS5 423 aa5.28□□□□□ -1.56
SCN3A-203ENST00000409101 PDGFDQ9GZP0 370 aaPredicted RBP5.28□□□□□ -1.56
SCN3A-203ENST00000409101 BFARQ9NZS9 450 aa5.28□□□□□ -1.56
SCN3A-203ENST00000409101 KLHL14Q9P2G3 628 aa5.28□□□□□ -1.56
SCN3A-203ENST00000409101 APEX2Q9UBZ4 518 aa5.28□□□□□ -1.56
SCN3A-203ENST00000409101 FAM198AQ9UFP1 575 aa5.28□□□□□ -1.56
SCN3A-203ENST00000409101 FBXO2Q9UK22 296 aaPredicted RBP5.28□□□□□ -1.56
SCN3A-203ENST00000409101 NDUFA10O95299 355 aa5.28□□□□□ -1.56
SCN3A-203ENST00000409101 MX2P20592 715 aa5.28□□□□□ -1.56
SCN3A-203ENST00000409101 IL1RL1Q01638 556 aa5.28□□□□□ -1.56
SCN3A-203ENST00000409101 FSTL1Q12841 308 aa5.28□□□□□ -1.56
SCN3A-203ENST00000409101 TAF11Q15544 211 aa5.28□□□□□ -1.56
SCN3A-203ENST00000409101 NFE2Q16621 373 aaPredicted RBP5.28□□□□□ -1.56
SCN3A-203ENST00000409101 ACBD5Q5T8D3 534 aaPredicted RBP5.28□□□□□ -1.56
SCN3A-203ENST00000409101 SLC27A1Q6PCB7 646 aa5.28□□□□□ -1.56
SCN3A-203ENST00000409101 WNT8AQ9H1J5 351 aa5.28□□□□□ -1.56
SCN3A-203ENST00000409101 VCX3BQ9H321 246 aa5.28□□□□□ -1.56
SCN3A-203ENST00000409101 MAP10Q9P2G4 905 aa5.28□□□□□ -1.56
SCN3A-203ENST00000409101 RWDD3Q9Y3V2 267 aa5.28□□□□□ -1.56
SCN3A-203ENST00000409101 NRCAMQ92823 1304 aa5.28□□□□□ -1.56
SCN3A-203ENST00000409101 FBXO21O94952 628 aa5.28□□□□□ -1.56
SCN3A-203ENST00000409101 FGGP02679 453 aa5.28□□□□□ -1.56
SCN3A-203ENST00000409101 WEE1P30291 646 aa5.28□□□□□ -1.56
SCN3A-203ENST00000409101 FMO5P49326 533 aa5.28□□□□□ -1.56
SCN3A-203ENST00000409101 OXCT1P55809 520 aa5.28□□□□□ -1.56
SCN3A-203ENST00000409101 CNTN2Q02246 1040 aa5.28□□□□□ -1.56
SCN3A-203ENST00000409101 GFPT1Q06210 699 aaPredicted RBP5.28□□□□□ -1.56
SCN3A-203ENST00000409101 C2orf54Q08AI8 447 aa5.28□□□□□ -1.56
SCN3A-203ENST00000409101 EFEMP1Q12805 493 aa5.28□□□□□ -1.56
SCN3A-203ENST00000409101 DBN1Q16643 649 aa5.28□□□□□ -1.56
SCN3A-203ENST00000409101 PPP4R4Q6NUP7 873 aa5.28□□□□□ -1.56
SCN3A-203ENST00000409101 CACNA2D3Q8IZS8 1091 aa5.28□□□□□ -1.56
SCN3A-203ENST00000409101 CLMNQ96JQ2 1002 aa5.28□□□□□ -1.56
SCN3A-203ENST00000409101 FGD4Q96M96 766 aa5.28□□□□□ -1.56
SCN3A-203ENST00000409101 GPR63Q9BZJ6 419 aa5.28□□□□□ -1.56
SCN3A-203ENST00000409101 CIPCQ9C0C6 399 aa5.28□□□□□ -1.56
SCN3A-203ENST00000409101 RANBP17Q9H2T7 1088 aaKnown RBP5.28□□□□□ -1.56
SCN3A-203ENST00000409101 HIPK3Q9H422 1215 aa5.28□□□□□ -1.56
SCN3A-203ENST00000409101 GOLPH3LQ9H4A5 285 aa5.28□□□□□ -1.56
SCN3A-203ENST00000409101 SAYSD1Q9NPB0 183 aa5.28□□□□□ -1.56
SCN3A-203ENST00000409101 AKAP7Q9P0M2 348 aaPredicted RBP5.28□□□□□ -1.56
SCN3A-203ENST00000409101 ITGA11Q9UKX5 1188 aa5.28□□□□□ -1.56
SCN3A-203ENST00000409101 EXOC1LA0A1B0GW35 172 aa5.27□□□□□ -1.57
SCN3A-203ENST00000409101 SLC12A8A0AV02 714 aa5.27□□□□□ -1.57
SCN3A-203ENST00000409101 FAM205CA6NFA0 338 aa5.27□□□□□ -1.57
SCN3A-203ENST00000409101 CAND2O75155 1236 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms