RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 NFKBIEO00221 500 aa10.46□□□□□ -0.73
MSH2-202ENST00000406134 ATP2A1O14983 1001 aa10.46□□□□□ -0.73
MSH2-202ENST00000406134 CST3P01034 146 aaPredicted RBP10.46□□□□□ -0.73
MSH2-202ENST00000406134 CLTAP09496 248 aa10.46□□□□□ -0.73
MSH2-202ENST00000406134 SUPT20HL2P0C7V6 817 aa10.46□□□□□ -0.73
MSH2-202ENST00000406134 ZSCAN5DPP0CG00 497 aa10.46□□□□□ -0.73
MSH2-202ENST00000406134 ETS1P14921 441 aa10.46□□□□□ -0.73
MSH2-202ENST00000406134 PTPRAP18433 802 aa10.46□□□□□ -0.73
MSH2-202ENST00000406134 CD58P19256 250 aa10.46□□□□□ -0.73
MSH2-202ENST00000406134 TNFSF9P41273 254 aa10.46□□□□□ -0.73
MSH2-202ENST00000406134 PPP1R7Q15435 360 aa10.46□□□□□ -0.73
MSH2-202ENST00000406134 TARBP2Q15633 366 aaKnown RBP10.46□□□□□ -0.73
MSH2-202ENST00000406134 SUPT20HL1Q3ZLR7 823 aa10.46□□□□□ -0.73
MSH2-202ENST00000406134 SNRNP48Q6IEG0 339 aaKnown RBP10.46□□□□□ -0.73
MSH2-202ENST00000406134 SYDE1Q6ZW31 735 aaPredicted RBP10.46□□□□□ -0.73
MSH2-202ENST00000406134 ARFGAP1Q8N6T3 406 aa10.46□□□□□ -0.73
MSH2-202ENST00000406134 CKAP2Q8WWK9 683 aa10.46□□□□□ -0.73
MSH2-202ENST00000406134 ARHGEF2Q92974 986 aaKnown RBP10.46□□□□□ -0.73
MSH2-202ENST00000406134 SGSM3Q96HU1 749 aa10.46□□□□□ -0.73
MSH2-202ENST00000406134 C12orf42Q96LP6 360 aa10.46□□□□□ -0.73
MSH2-202ENST00000406134 R3HDMLQ9H3Y0 253 aa10.46□□□□□ -0.73
MSH2-202ENST00000406134 MLXIPLQ9NP71 852 aa10.46□□□□□ -0.73
MSH2-202ENST00000406134 SLC9A2Q9UBY0 812 aa10.46□□□□□ -0.73
MSH2-202ENST00000406134 CCNG2Q16589 344 aa10.46□□□□□ -0.73
MSH2-202ENST00000406134 EP400NLQ6ZTU2 488 aa10.46□□□□□ -0.73
MSH2-202ENST00000406134 P3H4Q92791 437 aa10.46□□□□□ -0.73
MSH2-202ENST00000406134 RMDN2Q96LZ7 410 aa10.46□□□□□ -0.73
MSH2-202ENST00000406134 SLITRK1Q96PX8 696 aa10.46□□□□□ -0.73
MSH2-202ENST00000406134 TRAIPQ9BWF2 469 aa10.46□□□□□ -0.73
MSH2-202ENST00000406134 CCDC113Q9H0I3 377 aa10.46□□□□□ -0.73
MSH2-202ENST00000406134 C1orf112Q9NSG2 853 aa10.46□□□□□ -0.73
MSH2-202ENST00000406134 FGFR1OP2Q9NVK5 253 aa10.46□□□□□ -0.73
MSH2-202ENST00000406134 PDCD11Q14690 1871 aaKnown RBP10.46□□□□□ -0.74
MSH2-202ENST00000406134 LIASO43766 372 aa10.46□□□□□ -0.74
MSH2-202ENST00000406134 MMP8P22894 467 aa10.46□□□□□ -0.74
MSH2-202ENST00000406134 WDR4P57081 412 aaKnown RBP10.46□□□□□ -0.74
MSH2-202ENST00000406134 NCALDP61601 193 aa10.46□□□□□ -0.74
MSH2-202ENST00000406134 OASLQ15646 514 aaKnown RBP10.46□□□□□ -0.74
MSH2-202ENST00000406134 SAMD7Q7Z3H4 446 aa10.46□□□□□ -0.74
MSH2-202ENST00000406134 NLRX1Q86UT6 975 aa10.46□□□□□ -0.74
MSH2-202ENST00000406134 MCPH1Q8NEM0 835 aa10.46□□□□□ -0.74
MSH2-202ENST00000406134 GGT7Q9UJ14 662 aa10.46□□□□□ -0.74
MSH2-202ENST00000406134 TCP11X1B4DZS4 312 aa10.45□□□□□ -0.74
MSH2-202ENST00000406134 MAFGO15525 162 aa10.45□□□□□ -0.74
MSH2-202ENST00000406134 KRT10P13645 584 aa10.45□□□□□ -0.74
MSH2-202ENST00000406134 MAN1A1P33908 653 aa10.45□□□□□ -0.74
MSH2-202ENST00000406134 PSMC4P43686 418 aa10.45□□□□□ -0.74
MSH2-202ENST00000406134 GTF2A1P52655 376 aaPredicted RBP10.45□□□□□ -0.74
MSH2-202ENST00000406134 TGFB2P61812 414 aa10.45□□□□□ -0.74
MSH2-202ENST00000406134 GAD2Q05329 585 aa10.45□□□□□ -0.74
MSH2-202ENST00000406134 MTERF2Q49AM1 385 aa10.45□□□□□ -0.74
MSH2-202ENST00000406134 ASRGL1Q7L266 308 aa10.45□□□□□ -0.74
MSH2-202ENST00000406134 TRPM8Q7Z2W7 1104 aa10.45□□□□□ -0.74
MSH2-202ENST00000406134 PARP9Q8IXQ6 854 aa10.45□□□□□ -0.74
MSH2-202ENST00000406134 NIM1KQ8IY84 436 aa10.45□□□□□ -0.74
MSH2-202ENST00000406134 ATL2Q8NHH9 583 aa10.45□□□□□ -0.74
MSH2-202ENST00000406134 DENND1AQ8TEH3 1009 aa10.45□□□□□ -0.74
MSH2-202ENST00000406134 OSBPL8Q9BZF1 889 aa10.45□□□□□ -0.74
MSH2-202ENST00000406134 HACL1Q9UJ83 578 aa10.45□□□□□ -0.74
MSH2-202ENST00000406134 AGO2Q9UKV8 859 aaKnown RBP10.45□□□□□ -0.74
MSH2-202ENST00000406134 DNPEPQ9ULA0 475 aa10.45□□□□□ -0.74
MSH2-202ENST00000406134 NAALADL1Q9UQQ1 740 aa10.45□□□□□ -0.74
MSH2-202ENST00000406134 NUMBLQ9Y6R0 609 aa10.45□□□□□ -0.74
MSH2-202ENST00000406134 TMEM191CA6NGB0 347 aa10.45□□□□□ -0.74
MSH2-202ENST00000406134 ZBTB42B2RXF5 422 aa10.45□□□□□ -0.74
MSH2-202ENST00000406134 UBOX5O94941 541 aa10.45□□□□□ -0.74
MSH2-202ENST00000406134 PSAPP07602 524 aa10.45□□□□□ -0.74
MSH2-202ENST00000406134 GSTA1P08263 222 aa10.45□□□□□ -0.74
MSH2-202ENST00000406134 TMEM191BP0C7N4 346 aa10.45□□□□□ -0.74
MSH2-202ENST00000406134 PIK3CAP42336 1068 aa10.45□□□□□ -0.74
MSH2-202ENST00000406134 CAPSQ13938 189 aa10.45□□□□□ -0.74
MSH2-202ENST00000406134 KIAA0319LQ8IZA0 1049 aa10.45□□□□□ -0.74
MSH2-202ENST00000406134 EXD1Q8NHP7 514 aa10.45□□□□□ -0.74
MSH2-202ENST00000406134 CGRRF1Q99675 332 aa10.45□□□□□ -0.74
MSH2-202ENST00000406134 FBXO40Q9UH90 709 aa10.45□□□□□ -0.74
MSH2-202ENST00000406134 ASIC3Q9UHC3 531 aa10.45□□□□□ -0.74
MSH2-202ENST00000406134 CYTH4Q9UIA0 394 aa10.45□□□□□ -0.74
MSH2-202ENST00000406134 ALADP13716 330 aa10.45□□□□□ -0.74
MSH2-202ENST00000406134 GNA15P30679 374 aa10.45□□□□□ -0.74
MSH2-202ENST00000406134 VPS41P49754 854 aa10.45□□□□□ -0.74
MSH2-202ENST00000406134 OAZ1P54368 228 aa10.45□□□□□ -0.74
MSH2-202ENST00000406134 SP4Q02446 784 aa10.45□□□□□ -0.74
MSH2-202ENST00000406134 TMEM270Q6UE05 265 aa10.45□□□□□ -0.74
MSH2-202ENST00000406134 ZCCHC9Q8N567 271 aaKnown RBP10.45□□□□□ -0.74
MSH2-202ENST00000406134 FITM2Q8N6M3 262 aa10.45□□□□□ -0.74
MSH2-202ENST00000406134 RBBP8NLQ8NC74 664 aaPredicted RBP10.45□□□□□ -0.74
MSH2-202ENST00000406134 ATP6V0A1Q93050 837 aa10.45□□□□□ -0.74
MSH2-202ENST00000406134 VCPIP1Q96JH7 1222 aa10.45□□□□□ -0.74
MSH2-202ENST00000406134 TARS2Q9BW92 718 aaKnown RBP10.45□□□□□ -0.74
MSH2-202ENST00000406134 NIFKQ9BYG3 293 aaKnown RBP10.45□□□□□ -0.74
MSH2-202ENST00000406134 GINM1Q9NU53 330 aa10.45□□□□□ -0.74
MSH2-202ENST00000406134 TJP2Q9UDY2 1190 aa10.45□□□□□ -0.74
MSH2-202ENST00000406134 PNMA3Q9UL41 463 aa10.45□□□□□ -0.74
MSH2-202ENST00000406134 GOLGA6L7A0A1B0GV03 622 aa10.44□□□□□ -0.74
MSH2-202ENST00000406134 KCNJ2P63252 427 aa10.44□□□□□ -0.74
MSH2-202ENST00000406134 NOP14P78316 857 aaKnown RBP10.44□□□□□ -0.74
MSH2-202ENST00000406134 C1QBPQ07021 282 aaKnown RBP10.44□□□□□ -0.74
MSH2-202ENST00000406134 PREPLQ4J6C6 727 aaPredicted RBP10.44□□□□□ -0.74
MSH2-202ENST00000406134 PRAMEF18Q5VWM3 479 aa10.44□□□□□ -0.74
MSH2-202ENST00000406134 MFSD7Q6UXD7 560 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms