RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 KBTBD4Q9NVX7 518 aa19.11■□□□□ 0.65
COL18A1-204ENST00000400337 LRRIQ1Q96JM4 1722 aa19.1■□□□□ 0.65
COL18A1-204ENST00000400337 DDTLA6NHG4 134 aaPredicted RBP19.1■□□□□ 0.65
COL18A1-204ENST00000400337 CST8O60676 142 aa19.1■□□□□ 0.65
COL18A1-204ENST00000400337 DEUP1Q05D60 604 aa19.1■□□□□ 0.65
COL18A1-204ENST00000400337 DGKDQ16760 1214 aa19.1■□□□□ 0.65
COL18A1-204ENST00000400337 CYP4A22Q5TCH4 519 aa19.1■□□□□ 0.65
COL18A1-204ENST00000400337 TRIM65Q6PJ69 517 aa19.1■□□□□ 0.65
COL18A1-204ENST00000400337 SZRD1Q7Z422 152 aa19.1■□□□□ 0.65
COL18A1-204ENST00000400337 C4orf33Q8N1A6 199 aa19.1■□□□□ 0.65
COL18A1-204ENST00000400337 ASAP3Q8TDY4 903 aa19.1■□□□□ 0.65
COL18A1-204ENST00000400337 GGT7Q9UJ14 662 aa19.1■□□□□ 0.65
COL18A1-204ENST00000400337 PON1P27169 355 aa19.1■□□□□ 0.65
COL18A1-204ENST00000400337 NLRP11P59045 1033 aaKnown RBP19.1■□□□□ 0.65
COL18A1-204ENST00000400337 RAD51Q06609 339 aa19.1■□□□□ 0.65
COL18A1-204ENST00000400337 CAPRIN1Q14444 709 aaKnown RBP19.1■□□□□ 0.65
COL18A1-204ENST00000400337 EFTUD2Q15029 972 aaKnown RBP eCLIP19.1■□□□□ 0.652e-7■■■■□ 25.3
COL18A1-204ENST00000400337 LRIG3Q6UXM1 1119 aa19.1■□□□□ 0.65
COL18A1-204ENST00000400337 RGS9BPQ6ZS82 235 aa19.1■□□□□ 0.65
COL18A1-204ENST00000400337 EEF2KO00418 725 aaKnown RBP19.1■□□□□ 0.65
COL18A1-204ENST00000400337 CETPP11597 493 aa19.1■□□□□ 0.65
COL18A1-204ENST00000400337 POLE2P56282 527 aa19.1■□□□□ 0.65
COL18A1-204ENST00000400337 LAMC2Q13753 1193 aa19.1■□□□□ 0.65
COL18A1-204ENST00000400337 MOXD1Q6UVY6 613 aa19.1■□□□□ 0.65
COL18A1-204ENST00000400337 SPATA21Q7Z572 469 aa19.1■□□□□ 0.65
COL18A1-204ENST00000400337 PPHLN1Q8NEY8 458 aaKnown RBP19.1■□□□□ 0.65
COL18A1-204ENST00000400337 FEZF2Q8TBJ5 459 aa19.1■□□□□ 0.65
COL18A1-204ENST00000400337 XAB2Q9HCS7 855 aaKnown RBP19.1■□□□□ 0.65
COL18A1-204ENST00000400337 STOML1Q9UBI4 398 aa19.1■□□□□ 0.65
COL18A1-204ENST00000400337 A0A087X0T9 212 aa19.1■□□□□ 0.65
COL18A1-204ENST00000400337 FAM228BP0C875 321 aa19.1■□□□□ 0.65
COL18A1-204ENST00000400337 TMEM259Q4ZIN3 620 aa19.1■□□□□ 0.65
COL18A1-204ENST00000400337 TTC30AQ86WT1 665 aa19.1■□□□□ 0.65
COL18A1-204ENST00000400337 CBWD2Q8IUF1 395 aa19.1■□□□□ 0.65
COL18A1-204ENST00000400337 TRIML2Q8N7C3 387 aa19.1■□□□□ 0.65
COL18A1-204ENST00000400337 ARL8AQ96BM9 186 aa19.1■□□□□ 0.65
COL18A1-204ENST00000400337 TRPV6Q9H1D0 765 aa19.1■□□□□ 0.65
COL18A1-204ENST00000400337 SPATS2LQ9NUQ6 558 aaKnown RBP19.1■□□□□ 0.65
COL18A1-204ENST00000400337 E2F6O75461 281 aa19.09■□□□□ 0.65
COL18A1-204ENST00000400337 NPTXRO95502 500 aa19.09■□□□□ 0.65
COL18A1-204ENST00000400337 ITGB3P05106 788 aa19.09■□□□□ 0.65
COL18A1-204ENST00000400337 KCNV2Q8TDN2 545 aa19.09■□□□□ 0.65
COL18A1-204ENST00000400337 SMG5Q9UPR3 1016 aaKnown RBP19.09■□□□□ 0.65
COL18A1-204ENST00000400337 CHMP2BQ9UQN3 213 aa19.09■□□□□ 0.65
COL18A1-204ENST00000400337 FARP1Q9Y4F1 1045 aaPredicted RBP19.09■□□□□ 0.65
COL18A1-204ENST00000400337 FOXN3O00409 490 aaPredicted RBP19.09■□□□□ 0.65
COL18A1-204ENST00000400337 CCDC22O60826 627 aa19.09■□□□□ 0.65
COL18A1-204ENST00000400337 INPP1P49441 399 aa19.09■□□□□ 0.65
COL18A1-204ENST00000400337 CASP4P49662 377 aa19.09■□□□□ 0.65
COL18A1-204ENST00000400337 GOLGA7BQ2TAP0 167 aa19.09■□□□□ 0.65
COL18A1-204ENST00000400337 AP1ARQ63HQ0 302 aa19.09■□□□□ 0.65
COL18A1-204ENST00000400337 MTHFD1LQ6UB35 978 aa19.09■□□□□ 0.65
COL18A1-204ENST00000400337 REXO1L1PQ8IX06 675 aa19.09■□□□□ 0.65
COL18A1-204ENST00000400337 DDIASQ8IXT1 998 aa19.09■□□□□ 0.65
COL18A1-204ENST00000400337 NAGPAQ9UK23 515 aa19.09■□□□□ 0.65
COL18A1-204ENST00000400337 TCRBV5S4A2TA0A5A2 114 aa19.09■□□□□ 0.65
COL18A1-204ENST00000400337 ZNF189O75820 626 aaPredicted RBP19.09■□□□□ 0.65
COL18A1-204ENST00000400337 KYNUQ16719 465 aa19.09■□□□□ 0.65
COL18A1-204ENST00000400337 SV2CQ496J9 727 aa19.09■□□□□ 0.65
COL18A1-204ENST00000400337 DCAF6Q58WW2 860 aa19.09■□□□□ 0.65
COL18A1-204ENST00000400337 NYAP1Q6ZVC0 841 aa19.09■□□□□ 0.65
COL18A1-204ENST00000400337 ATPAF2Q8N5M1 289 aa19.09■□□□□ 0.65
COL18A1-204ENST00000400337 C1orf131Q8NDD1 294 aaKnown RBP19.09■□□□□ 0.65
COL18A1-204ENST00000400337 ERP44Q9BS26 406 aa19.09■□□□□ 0.65
COL18A1-204ENST00000400337 METTL5Q9NRN9 209 aaKnown RBP19.09■□□□□ 0.65
COL18A1-204ENST00000400337 SLC38A7Q9NVC3 462 aa19.09■□□□□ 0.65
COL18A1-204ENST00000400337 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.09■□□□□ 0.653e-7■■■■□ 22.9
COL18A1-204ENST00000400337 EHD2Q9NZN4 543 aa19.09■□□□□ 0.65
COL18A1-204ENST00000400337 GPD1P21695 349 aa19.09■□□□□ 0.65
COL18A1-204ENST00000400337 GIT2Q14161 759 aa19.09■□□□□ 0.65
COL18A1-204ENST00000400337 LBRQ14739 615 aaKnown RBP19.09■□□□□ 0.65
COL18A1-204ENST00000400337 PKN1Q16512 942 aa19.09■□□□□ 0.65
COL18A1-204ENST00000400337 CHUKO15111 745 aa19.08■□□□□ 0.65
COL18A1-204ENST00000400337 TTI2Q6NXR4 508 aa19.08■□□□□ 0.65
COL18A1-204ENST00000400337 TTC30BQ8N4P2 665 aa19.08■□□□□ 0.65
COL18A1-204ENST00000400337 SLC7A14Q8TBB6 771 aa19.08■□□□□ 0.65
COL18A1-204ENST00000400337 PABPC5Q96DU9 382 aaKnown RBP19.08■□□□□ 0.65
COL18A1-204ENST00000400337 RSAD1Q9HA92 442 aa19.08■□□□□ 0.65
COL18A1-204ENST00000400337 ZFYVE28Q9HCC9 887 aa19.08■□□□□ 0.65
COL18A1-204ENST00000400337 PRDM5Q9NQX1 630 aaPredicted RBP19.08■□□□□ 0.65
COL18A1-204ENST00000400337 RBP3P10745 1247 aa19.08■□□□□ 0.65
COL18A1-204ENST00000400337 KCNA1Q09470 495 aa19.08■□□□□ 0.65
COL18A1-204ENST00000400337 CUL2Q13617 745 aa19.08■□□□□ 0.65
COL18A1-204ENST00000400337 C3orf67Q6ZVT6 689 aa19.08■□□□□ 0.65
COL18A1-204ENST00000400337 TPCN2Q8NHX9 752 aa19.08■□□□□ 0.65
COL18A1-204ENST00000400337 SLC16A10Q8TF71 515 aa19.08■□□□□ 0.65
COL18A1-204ENST00000400337 WWP1Q9H0M0 922 aa19.08■□□□□ 0.65
COL18A1-204ENST00000400337 SEMA6BQ9H3T3 888 aa19.08■□□□□ 0.65
COL18A1-204ENST00000400337 DNAJC7Q99615 494 aa19.08■□□□□ 0.64
COL18A1-204ENST00000400337 PSMC3IPQ9P2W1 217 aaPredicted RBP19.08■□□□□ 0.64
COL18A1-204ENST00000400337 ITGA8P53708 1063 aa19.08■□□□□ 0.64
COL18A1-204ENST00000400337 CASP7P55210 303 aa19.08■□□□□ 0.64
COL18A1-204ENST00000400337 GNASQ5JWF2 1037 aa19.08■□□□□ 0.64
COL18A1-204ENST00000400337 GMCL1Q96IK5 515 aa19.08■□□□□ 0.64
COL18A1-204ENST00000400337 TRPC7Q9HCX4 862 aa19.08■□□□□ 0.64
COL18A1-204ENST00000400337 ITSN1Q15811 1721 aa19.08■□□□□ 0.64
COL18A1-204ENST00000400337 TMEM247A6NEH6 219 aa19.07■□□□□ 0.64
COL18A1-204ENST00000400337 GNL1P36915 607 aaPredicted RBP19.07■□□□□ 0.64
COL18A1-204ENST00000400337 NOTUMQ6P988 496 aa19.07■□□□□ 0.64
COL18A1-204ENST00000400337 ST13P4Q8IZP2 240 aaPredicted RBP19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms