RNA–Protein interactions for RNA: ENST00000400183.6

USP25-204, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best) BASIC

Gene USP25, Length 5,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-204ENST00000400183 PLA2G4FQ68DD2 849 aa19.4■□□□□ 0.7
USP25-204ENST00000400183 RFX8Q6ZV50 586 aa19.4■□□□□ 0.7
USP25-204ENST00000400183 CDV3Q9UKY7 258 aaKnown RBP19.4■□□□□ 0.7
USP25-204ENST00000400183 LRRC7Q96NW7 1537 aa19.4■□□□□ 0.7
USP25-204ENST00000400183 ASMTLO95671 621 aa19.4■□□□□ 0.7
USP25-204ENST00000400183 CHN1P15882 459 aa19.4■□□□□ 0.7
USP25-204ENST00000400183 PCSK1P29120 753 aa19.4■□□□□ 0.7
USP25-204ENST00000400183 GTF2H3Q13889 308 aa19.4■□□□□ 0.7
USP25-204ENST00000400183 SNX17Q15036 470 aa19.4■□□□□ 0.7
USP25-204ENST00000400183 LONRF1Q17RB8 773 aa19.4■□□□□ 0.7
USP25-204ENST00000400183 CCNI2Q6ZMN8 369 aaPredicted RBP19.4■□□□□ 0.7
USP25-204ENST00000400183 TRPC7Q9HCX4 862 aa19.4■□□□□ 0.7
USP25-204ENST00000400183 IGSF9BQ9UPX0 1349 aa19.4■□□□□ 0.7
USP25-204ENST00000400183 A0A1W2PQJ5 194 aa19.4■□□□□ 0.7
USP25-204ENST00000400183 MAN1A2O60476 641 aa19.4■□□□□ 0.7
USP25-204ENST00000400183 ENO1P06733 434 aaKnown RBP19.4■□□□□ 0.7
USP25-204ENST00000400183 PDK1Q15118 436 aa19.4■□□□□ 0.7
USP25-204ENST00000400183 C6orf10Q5SRN2 563 aa19.4■□□□□ 0.7
USP25-204ENST00000400183 XRRA1Q6P2D8 792 aa19.4■□□□□ 0.7
USP25-204ENST00000400183 ARHGAP18Q8N392 663 aa19.4■□□□□ 0.7
USP25-204ENST00000400183 SYTL3Q4VX76 610 aa19.4■□□□□ 0.7
USP25-204ENST00000400183 CATSPER3Q86XQ3 398 aa19.4■□□□□ 0.7
USP25-204ENST00000400183 STAMBPL1Q96FJ0 436 aa19.4■□□□□ 0.7
USP25-204ENST00000400183 FOPNLQ96NB1 174 aa19.4■□□□□ 0.7
USP25-204ENST00000400183 PARK7Q99497 189 aaKnown RBP19.4■□□□□ 0.7
USP25-204ENST00000400183 FAM47DPA6NHR8 397 aa19.39■□□□□ 0.7
USP25-204ENST00000400183 SLC25A27O95847 323 aa19.39■□□□□ 0.7
USP25-204ENST00000400183 SPRP35270 261 aaPredicted RBP19.39■□□□□ 0.7
USP25-204ENST00000400183 ANTXR2P58335 489 aa19.39■□□□□ 0.7
USP25-204ENST00000400183 DNAL1Q4LDG9 190 aa19.39■□□□□ 0.7
USP25-204ENST00000400183 ZNF677Q86XU0 584 aa19.39■□□□□ 0.7
USP25-204ENST00000400183 JAMLQ86YT9 394 aa19.39■□□□□ 0.7
USP25-204ENST00000400183 GTF3C2Q8WUA4 911 aaPredicted RBP19.39■□□□□ 0.7
USP25-204ENST00000400183 NIF3L1Q9GZT8 377 aa19.39■□□□□ 0.7
USP25-204ENST00000400183 PRDM5Q9NQX1 630 aaPredicted RBP19.39■□□□□ 0.7
USP25-204ENST00000400183 SV2CQ496J9 727 aa19.39■□□□□ 0.69
USP25-204ENST00000400183 USP49Q70CQ1 688 aa19.39■□□□□ 0.69
USP25-204ENST00000400183 ADAM33Q9BZ11 813 aa19.39■□□□□ 0.69
USP25-204ENST00000400183 LATS2Q9NRM7 1088 aa19.39■□□□□ 0.69
USP25-204ENST00000400183 NSMCE4AQ9NXX6 385 aa19.39■□□□□ 0.69
USP25-204ENST00000400183 COMTP21964 271 aa19.39■□□□□ 0.69
USP25-204ENST00000400183 FXR2P51116 673 aaKnown RBP eCLIP19.39■□□□□ 0.692e-8■□□□□ 9.4
USP25-204ENST00000400183 CALML6Q8TD86 181 aa19.39■□□□□ 0.69
USP25-204ENST00000400183 JMJD4Q9H9V9 463 aa19.39■□□□□ 0.69
USP25-204ENST00000400183 EPB41L4AQ9HCS5 686 aaPredicted RBP19.39■□□□□ 0.69
USP25-204ENST00000400183 RPS6KA5O75582 802 aa19.39■□□□□ 0.69
USP25-204ENST00000400183 EN1Q05925 392 aaPredicted RBP19.39■□□□□ 0.69
USP25-204ENST00000400183 PRUNE1Q86TP1 453 aa19.39■□□□□ 0.69
USP25-204ENST00000400183 C4orf33Q8N1A6 199 aa19.39■□□□□ 0.69
USP25-204ENST00000400183 TC2NQ8N9U0 490 aa19.39■□□□□ 0.69
USP25-204ENST00000400183 ELMO2Q96JJ3 720 aa19.39■□□□□ 0.69
USP25-204ENST00000400183 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.39■□□□□ 0.69
USP25-204ENST00000400183 TSPOAP1O95153 1857 aa19.39■□□□□ 0.69
USP25-204ENST00000400183 CNTNAP5Q8WYK1 1306 aa19.39■□□□□ 0.69
USP25-204ENST00000400183 OCM2P0CE71 109 aa19.38■□□□□ 0.69
USP25-204ENST00000400183 OCMP0CE72 109 aaPredicted RBP19.38■□□□□ 0.69
USP25-204ENST00000400183 ITGA4P13612 1032 aa19.38■□□□□ 0.69
USP25-204ENST00000400183 AKT1P31749 480 aa19.38■□□□□ 0.69
USP25-204ENST00000400183 SH2D3CQ8N5H7 860 aa19.38■□□□□ 0.69
USP25-204ENST00000400183 SPATA18Q8TC71 538 aa19.38■□□□□ 0.69
USP25-204ENST00000400183 RBM12Q9NTZ6 932 aaKnown RBP19.38■□□□□ 0.69
USP25-204ENST00000400183 MRGBPQ9NV56 204 aa19.38■□□□□ 0.69
USP25-204ENST00000400183 EXTL3O43909 919 aa19.38■□□□□ 0.69
USP25-204ENST00000400183 DCP1BQ8IZD4 617 aaKnown RBP19.38■□□□□ 0.69
USP25-204ENST00000400183 ZNF512Q96ME7 567 aaPredicted RBP19.38■□□□□ 0.69
USP25-204ENST00000400183 TASP1Q9H6P5 420 aa19.38■□□□□ 0.69
USP25-204ENST00000400183 ANKEF1Q9NU02 776 aa19.38■□□□□ 0.69
USP25-204ENST00000400183 FAM49BQ9NUQ9 324 aa19.38■□□□□ 0.69
USP25-204ENST00000400183 TRAF3IP3Q9Y228 551 aa19.38■□□□□ 0.69
USP25-204ENST00000400183 USP15Q9Y4E8 981 aaPredicted RBP19.38■□□□□ 0.69
USP25-204ENST00000400183 HMBSP08397 361 aa19.38■□□□□ 0.69
USP25-204ENST00000400183 ACBD5Q5T8D3 534 aaPredicted RBP19.38■□□□□ 0.69
USP25-204ENST00000400183 IL31Q6EBC2 164 aa19.38■□□□□ 0.69
USP25-204ENST00000400183 RAD9BQ6WBX8 426 aa19.38■□□□□ 0.69
USP25-204ENST00000400183 PPP2R3CQ969Q6 453 aa19.38■□□□□ 0.69
USP25-204ENST00000400183 PPP1R36Q96LQ0 422 aa19.38■□□□□ 0.69
USP25-204ENST00000400183 MRPL1Q9BYD6 325 aaKnown RBP19.38■□□□□ 0.69
USP25-204ENST00000400183 CHMP2BQ9UQN3 213 aa19.38■□□□□ 0.69
USP25-204ENST00000400183 GLI2P10070 1586 aa19.38■□□□□ 0.69
USP25-204ENST00000400183 ALKQ9UM73 1620 aa19.38■□□□□ 0.69
USP25-204ENST00000400183 A0A0G2JLW4 131 aa19.38■□□□□ 0.69
USP25-204ENST00000400183 SPDYAQ5MJ70 313 aa19.38■□□□□ 0.69
USP25-204ENST00000400183 MTIF3Q9H2K0 278 aaKnown RBP19.38■□□□□ 0.69
USP25-204ENST00000400183 NPHS2Q9NP85 383 aa19.38■□□□□ 0.69
USP25-204ENST00000400183 HBP1O60381 514 aa19.38■□□□□ 0.69
USP25-204ENST00000400183 PTK7Q13308 1070 aa19.38■□□□□ 0.69
USP25-204ENST00000400183 DDX53Q86TM3 631 aaKnown RBP19.38■□□□□ 0.69
USP25-204ENST00000400183 PCMTD2Q9NV79 361 aa19.38■□□□□ 0.69
USP25-204ENST00000400183 ERAP1Q9NZ08 941 aa19.38■□□□□ 0.69
USP25-204ENST00000400183 PSMD14O00487 310 aa19.37■□□□□ 0.69
USP25-204ENST00000400183 GRAP2O75791 330 aa19.37■□□□□ 0.69
USP25-204ENST00000400183 AGBL2Q5U5Z8 902 aa19.37■□□□□ 0.69
USP25-204ENST00000400183 GPAT2Q6NUI2 795 aa19.37■□□□□ 0.69
USP25-204ENST00000400183 GLB1LQ6UWU2 654 aa19.37■□□□□ 0.69
USP25-204ENST00000400183 KCNK16Q96T55 309 aa19.37■□□□□ 0.69
USP25-204ENST00000400183 CATSPERBQ9H7T0 1116 aa19.37■□□□□ 0.69
USP25-204ENST00000400183 ZBTB12Q9Y330 459 aaPredicted RBP19.37■□□□□ 0.69
USP25-204ENST00000400183 ALG6Q9Y672 507 aa19.37■□□□□ 0.69
USP25-204ENST00000400183 CCDC78A2IDD5 438 aa19.37■□□□□ 0.69
USP25-204ENST00000400183 CHST13Q8NET6 341 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms