RNA–Protein interactions for RNA: ENST00000399975.7

USP16-203, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene USP16, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-203ENST00000399975 FGBP02675 491 aa7.35□□□□□ -1.23
USP16-203ENST00000399975 CCDC172P0C7W6 258 aa7.35□□□□□ -1.23
USP16-203ENST00000399975 FERP16591 822 aa7.35□□□□□ -1.23
USP16-203ENST00000399975 SOX5P35711 763 aa7.35□□□□□ -1.23
USP16-203ENST00000399975 STAT1P42224 750 aa7.35□□□□□ -1.23
USP16-203ENST00000399975 SCNN1GP51170 649 aa7.35□□□□□ -1.23
USP16-203ENST00000399975 POLR2FP61218 127 aaKnown RBP7.35□□□□□ -1.23
USP16-203ENST00000399975 HTRA4P83105 476 aaPredicted RBP7.35□□□□□ -1.23
USP16-203ENST00000399975 INCA1Q0VD86 236 aa7.35□□□□□ -1.23
USP16-203ENST00000399975 ZNF699Q32M78 642 aa7.35□□□□□ -1.23
USP16-203ENST00000399975 TMEM240Q5SV17 173 aa7.35□□□□□ -1.23
USP16-203ENST00000399975 DCLRE1AQ6PJP8 1040 aa7.35□□□□□ -1.23
USP16-203ENST00000399975 CD300LGQ6UXG3 332 aa7.35□□□□□ -1.23
USP16-203ENST00000399975 CCDC186Q7Z3E2 898 aa7.35□□□□□ -1.23
USP16-203ENST00000399975 DEFB128Q7Z7B8 93 aa7.35□□□□□ -1.23
USP16-203ENST00000399975 TMEM139Q8IV31 216 aa7.35□□□□□ -1.23
USP16-203ENST00000399975 LRRC8AQ8IWT6 810 aa7.35□□□□□ -1.23
USP16-203ENST00000399975 TOP6BLQ8N6T0 577 aa7.35□□□□□ -1.23
USP16-203ENST00000399975 BADQ92934 168 aa7.35□□□□□ -1.23
USP16-203ENST00000399975 TATDN2Q93075 761 aa7.35□□□□□ -1.23
USP16-203ENST00000399975 HPDLQ96IR7 371 aa7.35□□□□□ -1.23
USP16-203ENST00000399975 ZFP42Q96MM3 310 aa7.35□□□□□ -1.23
USP16-203ENST00000399975 AGAP1Q9UPQ3 857 aa7.35□□□□□ -1.23
USP16-203ENST00000399975 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.35□□□□□ -1.23
USP16-203ENST00000399975 CTIFO43310 598 aaKnown RBP7.35□□□□□ -1.23
USP16-203ENST00000399975 KRT9P35527 623 aa7.35□□□□□ -1.23
USP16-203ENST00000399975 TAF6P49848 677 aa7.35□□□□□ -1.23
USP16-203ENST00000399975 DRAP1Q14919 205 aaPredicted RBP7.35□□□□□ -1.23
USP16-203ENST00000399975 ZNF667Q5HYK9 610 aa7.35□□□□□ -1.23
USP16-203ENST00000399975 SFMBT2Q5VUG0 894 aa7.35□□□□□ -1.23
USP16-203ENST00000399975 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.35□□□□□ -1.23
USP16-203ENST00000399975 IRF2BP2Q7Z5L9 587 aa7.35□□□□□ -1.23
USP16-203ENST00000399975 SYT11Q9BT88 431 aa7.35□□□□□ -1.23
USP16-203ENST00000399975 UBE2TQ9NPD8 197 aaPredicted RBP7.35□□□□□ -1.23
USP16-203ENST00000399975 KCND1Q9NSA2 647 aa7.35□□□□□ -1.23
USP16-203ENST00000399975 TBC1D13Q9NVG8 400 aa7.35□□□□□ -1.23
USP16-203ENST00000399975 SCN1AP35498 2009 aa7.35□□□□□ -1.23
USP16-203ENST00000399975 SSU72P8A0A1W2PR75 194 aa7.34□□□□□ -1.23
USP16-203ENST00000399975 ARHGEF37A1IGU5 675 aa7.34□□□□□ -1.23
USP16-203ENST00000399975 M0QZQ0 153 aa7.34□□□□□ -1.23
USP16-203ENST00000399975 PODXLO00592 558 aa7.34□□□□□ -1.23
USP16-203ENST00000399975 CYP11A1P05108 521 aa7.34□□□□□ -1.23
USP16-203ENST00000399975 SERPING1P05155 500 aa7.34□□□□□ -1.23
USP16-203ENST00000399975 WARSP23381 471 aaKnown RBP7.34□□□□□ -1.23
USP16-203ENST00000399975 SCARA3Q6AZY7 606 aa7.34□□□□□ -1.23
USP16-203ENST00000399975 WDR59Q6PJI9 974 aa7.34□□□□□ -1.23
USP16-203ENST00000399975 CACNA2D4Q7Z3S7 1137 aa7.34□□□□□ -1.23
USP16-203ENST00000399975 TMTC1Q8IUR5 882 aa7.34□□□□□ -1.23
USP16-203ENST00000399975 LRRC43Q8N309 656 aa7.34□□□□□ -1.23
USP16-203ENST00000399975 SPC24Q8NBT2 197 aa7.34□□□□□ -1.23
USP16-203ENST00000399975 SP7Q8TDD2 431 aaPredicted RBP7.34□□□□□ -1.23
USP16-203ENST00000399975 SLC9A7Q96T83 725 aa7.34□□□□□ -1.23
USP16-203ENST00000399975 LRRC53A6NM62 1247 aa7.34□□□□□ -1.23
USP16-203ENST00000399975 LRRN2O75325 713 aa7.34□□□□□ -1.23
USP16-203ENST00000399975 LCA5LO95447 670 aa7.34□□□□□ -1.23
USP16-203ENST00000399975 TYMPP19971 482 aa7.34□□□□□ -1.23
USP16-203ENST00000399975 RGS19P49795 217 aa7.34□□□□□ -1.23
USP16-203ENST00000399975 BPIFB4P59827 614 aa7.34□□□□□ -1.23
USP16-203ENST00000399975 LILRA4P59901 499 aa7.34□□□□□ -1.23
USP16-203ENST00000399975 DMTNQ08495 405 aa7.34□□□□□ -1.23
USP16-203ENST00000399975 HGSNATQ68CP4 663 aa7.34□□□□□ -1.23
USP16-203ENST00000399975 RRAGAQ7L523 313 aa7.34□□□□□ -1.23
USP16-203ENST00000399975 UNC93AQ86WB7 457 aa7.34□□□□□ -1.23
USP16-203ENST00000399975 ZNF677Q86XU0 584 aa7.34□□□□□ -1.23
USP16-203ENST00000399975 CCDC170Q8IYT3 715 aa7.34□□□□□ -1.23
USP16-203ENST00000399975 TMEM86AQ8N2M4 240 aa7.34□□□□□ -1.23
USP16-203ENST00000399975 PI4K2AQ9BTU6 479 aa7.34□□□□□ -1.23
USP16-203ENST00000399975 CWH43Q9H720 699 aa7.34□□□□□ -1.23
USP16-203ENST00000399975 STK39Q9UEW8 545 aa7.34□□□□□ -1.23
USP16-203ENST00000399975 NENFQ9UMX5 172 aa7.34□□□□□ -1.23
USP16-203ENST00000399975 KPNA7A9QM74 516 aa7.33□□□□□ -1.24
USP16-203ENST00000399975 DDHD2O94830 711 aa7.33□□□□□ -1.24
USP16-203ENST00000399975 PAEPP09466 180 aa7.33□□□□□ -1.24
USP16-203ENST00000399975 FGFR1P11362 822 aa7.33□□□□□ -1.24
USP16-203ENST00000399975 AFF1P51825 1210 aaKnown RBP7.33□□□□□ -1.24
USP16-203ENST00000399975 GUCY2FP51841 1108 aa7.33□□□□□ -1.24
USP16-203ENST00000399975 CCZ1BP86790 482 aa7.33□□□□□ -1.24
USP16-203ENST00000399975 CCZ1P86791 482 aaPredicted RBP7.33□□□□□ -1.24
USP16-203ENST00000399975 APBA1Q02410 837 aa7.33□□□□□ -1.24
USP16-203ENST00000399975 ASIC2Q16515 512 aa7.33□□□□□ -1.24
USP16-203ENST00000399975 PTPN21Q16825 1174 aa7.33□□□□□ -1.24
USP16-203ENST00000399975 ASTE1Q2TB18 679 aaPredicted RBP7.33□□□□□ -1.24
USP16-203ENST00000399975 GLRA4Q5JXX5 417 aa7.33□□□□□ -1.24
USP16-203ENST00000399975 GJB7Q6PEY0 223 aa7.33□□□□□ -1.24
USP16-203ENST00000399975 CYP26C1Q6V0L0 522 aa7.33□□□□□ -1.24
USP16-203ENST00000399975 GPR65Q8IYL9 337 aa7.33□□□□□ -1.24
USP16-203ENST00000399975 ANKRD7Q92527 254 aa7.33□□□□□ -1.24
USP16-203ENST00000399975 SUSD3Q96L08 255 aa7.33□□□□□ -1.24
USP16-203ENST00000399975 OXCT2Q9BYC2 517 aaPredicted RBP7.33□□□□□ -1.24
USP16-203ENST00000399975 NRDE2Q9H7Z3 1164 aa7.33□□□□□ -1.24
USP16-203ENST00000399975 ZNHIT6Q9NWK9 470 aaKnown RBP7.33□□□□□ -1.24
USP16-203ENST00000399975 DSEQ9UL01 958 aa7.33□□□□□ -1.24
USP16-203ENST00000399975 KIAA1257Q9ULG3 409 aa7.33□□□□□ -1.24
USP16-203ENST00000399975 NR2E3Q9Y5X4 410 aa7.33□□□□□ -1.24
USP16-203ENST00000399975 RBAK-RBAKDNI3L0D1 243 aa7.33□□□□□ -1.24
USP16-203ENST00000399975 FOXN3O00409 490 aaPredicted RBP7.33□□□□□ -1.24
USP16-203ENST00000399975 GABRDO14764 452 aa7.33□□□□□ -1.24
USP16-203ENST00000399975 PPEF2O14830 753 aa7.33□□□□□ -1.24
USP16-203ENST00000399975 SPTLC1O15269 473 aa7.33□□□□□ -1.24
USP16-203ENST00000399975 KRT19P08727 400 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms