RNA–Protein interactions for RNA: ENST00000399127.5

COL25A1-202, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-202ENST00000399127 ASB14A6NK59 587 aa12.53□□□□□ -0.4
COL25A1-202ENST00000399127 ANKRD65E5RJM6 399 aa12.53□□□□□ -0.4
COL25A1-202ENST00000399127 O00370 1275 aa12.53□□□□□ -0.4
COL25A1-202ENST00000399127 KIF3CO14782 793 aa12.53□□□□□ -0.4
COL25A1-202ENST00000399127 ADCYAP1R1P41586 468 aa12.53□□□□□ -0.4
COL25A1-202ENST00000399127 PPARDQ03181 441 aa12.53□□□□□ -0.4
COL25A1-202ENST00000399127 CENPCQ03188 943 aa12.53□□□□□ -0.4
COL25A1-202ENST00000399127 TTC27Q6P3X3 843 aa12.53□□□□□ -0.4
COL25A1-202ENST00000399127 WDR49Q8IV35 697 aa12.53□□□□□ -0.4
COL25A1-202ENST00000399127 AFG1LQ8WV93 481 aa12.53□□□□□ -0.4
COL25A1-202ENST00000399127 MAGOHBQ96A72 148 aaKnown RBP12.53□□□□□ -0.4
COL25A1-202ENST00000399127 ERAP1Q9NZ08 941 aa12.53□□□□□ -0.4
COL25A1-202ENST00000399127 CPSF3Q9UKF6 684 aaKnown RBP12.53□□□□□ -0.4
COL25A1-202ENST00000399127 PLAAQ9Y263 795 aa12.53□□□□□ -0.4
COL25A1-202ENST00000399127 PTPN22Q9Y2R2 807 aa12.53□□□□□ -0.4
COL25A1-202ENST00000399127 PCDHA3Q9Y5H8 950 aa12.53□□□□□ -0.4
COL25A1-202ENST00000399127 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.53□□□□□ -0.4
COL25A1-202ENST00000399127 OPA1O60313 960 aa12.53□□□□□ -0.4
COL25A1-202ENST00000399127 HBP1O60381 514 aa12.53□□□□□ -0.4
COL25A1-202ENST00000399127 ASS1P00966 412 aaKnown RBP12.53□□□□□ -0.4
COL25A1-202ENST00000399127 CYP1A1P04798 512 aaPredicted RBP12.53□□□□□ -0.4
COL25A1-202ENST00000399127 LGALS2P05162 132 aa12.53□□□□□ -0.4
COL25A1-202ENST00000399127 CXCL8P10145 99 aa12.53□□□□□ -0.4
COL25A1-202ENST00000399127 HSD17B3P37058 310 aa12.53□□□□□ -0.4
COL25A1-202ENST00000399127 SSR1P43307 286 aaKnown RBP12.53□□□□□ -0.4
COL25A1-202ENST00000399127 KCNJ1P48048 391 aa12.53□□□□□ -0.4
COL25A1-202ENST00000399127 MCL1Q07820 350 aa12.53□□□□□ -0.4
COL25A1-202ENST00000399127 TTC19Q6DKK2 380 aaPredicted RBP12.53□□□□□ -0.4
COL25A1-202ENST00000399127 TAPT1Q6NXT6 567 aa12.53□□□□□ -0.4
COL25A1-202ENST00000399127 MON1BQ7L1V2 547 aa12.53□□□□□ -0.4
COL25A1-202ENST00000399127 DPP9Q86TI2 863 aa12.53□□□□□ -0.4
COL25A1-202ENST00000399127 ZNF677Q86XU0 584 aa12.53□□□□□ -0.4
COL25A1-202ENST00000399127 JAMLQ86YT9 394 aa12.53□□□□□ -0.4
COL25A1-202ENST00000399127 RASAL3Q86YV0 1011 aa12.53□□□□□ -0.4
COL25A1-202ENST00000399127 EFCAB13Q8IY85 973 aa12.53□□□□□ -0.4
COL25A1-202ENST00000399127 ABRAQ8N0Z2 381 aa12.53□□□□□ -0.4
COL25A1-202ENST00000399127 FAM76AQ8TAV0 307 aa12.53□□□□□ -0.4
COL25A1-202ENST00000399127 PPP1R13LQ8WUF5 828 aa12.53□□□□□ -0.4
COL25A1-202ENST00000399127 CENPHQ9H3R5 247 aa12.53□□□□□ -0.4
COL25A1-202ENST00000399127 ADAM22Q9P0K1 906 aa12.53□□□□□ -0.4
COL25A1-202ENST00000399127 SNX24Q9Y343 169 aa12.53□□□□□ -0.4
COL25A1-202ENST00000399127 KLHL33A6NCF5 533 aa12.52□□□□□ -0.4
COL25A1-202ENST00000399127 BHMG1C9JSJ3 638 aaPredicted RBP12.52□□□□□ -0.4
COL25A1-202ENST00000399127 ACKR2O00590 384 aa12.52□□□□□ -0.4
COL25A1-202ENST00000399127 GAS2O43903 313 aaKnown RBP12.52□□□□□ -0.4
COL25A1-202ENST00000399127 C22orf31O95567 290 aa12.52□□□□□ -0.4
COL25A1-202ENST00000399127 VTNP04004 478 aa12.52□□□□□ -0.4
COL25A1-202ENST00000399127 KRT19P08727 400 aa12.52□□□□□ -0.4
COL25A1-202ENST00000399127 HOXC6P09630 235 aa12.52□□□□□ -0.4
COL25A1-202ENST00000399127 TMEM191BP0C7N4 346 aa12.52□□□□□ -0.4
COL25A1-202ENST00000399127 TBXAS1P24557 533 aaPredicted RBP12.52□□□□□ -0.4
COL25A1-202ENST00000399127 GJC1P36383 396 aa12.52□□□□□ -0.4
COL25A1-202ENST00000399127 HSPA9P38646 679 aaKnown RBP12.52□□□□□ -0.4
COL25A1-202ENST00000399127 RWDD2BP57060 319 aa12.52□□□□□ -0.4
COL25A1-202ENST00000399127 NOMO3P69849 1222 aa12.52□□□□□ -0.4
COL25A1-202ENST00000399127 MBTD1Q05BQ5 628 aa12.52□□□□□ -0.4
COL25A1-202ENST00000399127 TRPC3Q13507 836 aa12.52□□□□□ -0.4
COL25A1-202ENST00000399127 UAP1Q16222 522 aaPredicted RBP12.52□□□□□ -0.4
COL25A1-202ENST00000399127 DUOXA2Q1HG44 320 aa12.52□□□□□ -0.4
COL25A1-202ENST00000399127 RGMBQ6NW40 437 aa12.52□□□□□ -0.4
COL25A1-202ENST00000399127 MPZL3Q6UWV2 235 aa12.52□□□□□ -0.4
COL25A1-202ENST00000399127 MREGQ8N565 214 aa12.52□□□□□ -0.4
COL25A1-202ENST00000399127 MORC4Q8TE76 937 aa12.52□□□□□ -0.4
COL25A1-202ENST00000399127 C2orf40Q9H1Z8 148 aa12.52□□□□□ -0.4
COL25A1-202ENST00000399127 NXF1Q9UBU9 619 aaKnown RBP12.52□□□□□ -0.4
COL25A1-202ENST00000399127 USTQ9Y2C2 406 aa12.52□□□□□ -0.4
COL25A1-202ENST00000399127 A0A087WZ62 844 aa12.52□□□□□ -0.41
COL25A1-202ENST00000399127 MYO1FO00160 1098 aa12.52□□□□□ -0.41
COL25A1-202ENST00000399127 PHF2O75151 1096 aa12.52□□□□□ -0.41
COL25A1-202ENST00000399127 TFDP1Q14186 410 aa12.52□□□□□ -0.41
COL25A1-202ENST00000399127 CCDC137Q6PK04 289 aaKnown RBP12.52□□□□□ -0.41
COL25A1-202ENST00000399127 TSHZ1Q6ZSZ6 1077 aa12.52□□□□□ -0.41
COL25A1-202ENST00000399127 GPR142Q7Z601 462 aa12.52□□□□□ -0.41
COL25A1-202ENST00000399127 SAPCD2Q86UD0 394 aa12.52□□□□□ -0.41
COL25A1-202ENST00000399127 SLC13A5Q86YT5 568 aaPredicted RBP12.52□□□□□ -0.41
COL25A1-202ENST00000399127 UBLCP1Q8WVY7 318 aaPredicted RBP12.52□□□□□ -0.41
COL25A1-202ENST00000399127 ZNF606Q8WXB4 792 aa12.52□□□□□ -0.41
COL25A1-202ENST00000399127 CPB2Q96IY4 423 aa12.52□□□□□ -0.41
COL25A1-202ENST00000399127 FDXACB1Q9BRP7 624 aaPredicted RBP12.52□□□□□ -0.41
COL25A1-202ENST00000399127 ERP44Q9BS26 406 aa12.52□□□□□ -0.41
COL25A1-202ENST00000399127 FZD8Q9H461 694 aa12.52□□□□□ -0.41
COL25A1-202ENST00000399127 CISHQ9NSE2 258 aa12.52□□□□□ -0.41
COL25A1-202ENST00000399127 ABT1Q9ULW3 272 aaKnown RBP12.52□□□□□ -0.41
COL25A1-202ENST00000399127 AKT3Q9Y243 479 aa12.52□□□□□ -0.41
COL25A1-202ENST00000399127 IGF2BP3O00425 579 aaKnown RBP eCLIP12.51□□□□□ -0.41
COL25A1-202ENST00000399127 RARAP10276 462 aa12.51□□□□□ -0.41
COL25A1-202ENST00000399127 RAP1GAPP47736 663 aa12.51□□□□□ -0.41
COL25A1-202ENST00000399127 SLC26A2P50443 739 aa12.51□□□□□ -0.41
COL25A1-202ENST00000399127 PLTPP55058 493 aa12.51□□□□□ -0.41
COL25A1-202ENST00000399127 DHX9Q08211 1270 aaKnown RBP12.51□□□□□ -0.41
COL25A1-202ENST00000399127 PPFIA1Q13136 1202 aa12.51□□□□□ -0.41
COL25A1-202ENST00000399127 ORC1Q13415 861 aa12.51□□□□□ -0.41
COL25A1-202ENST00000399127 TAF1CQ15572 869 aaPredicted RBP12.51□□□□□ -0.41
COL25A1-202ENST00000399127 SKIDA1Q1XH10 827 aa12.51□□□□□ -0.41
COL25A1-202ENST00000399127 ZNF699Q32M78 642 aa12.51□□□□□ -0.41
COL25A1-202ENST00000399127 ZNF792Q3KQV3 632 aa12.51□□□□□ -0.41
COL25A1-202ENST00000399127 CEP85LQ5SZL2 805 aa12.51□□□□□ -0.41
COL25A1-202ENST00000399127 C1orf54Q8WWF1 131 aa12.51□□□□□ -0.41
COL25A1-202ENST00000399127 CDT1Q9H211 546 aa12.51□□□□□ -0.41
COL25A1-202ENST00000399127 IFT122Q9HBG6 1241 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms