RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 FRS3O43559 492 aa3.5□□□□□ -1.85
CD47-203ENST00000398258 AKR1B10O60218 316 aa3.5□□□□□ -1.85
CD47-203ENST00000398258 HTR1BP28222 390 aa3.5□□□□□ -1.85
CD47-203ENST00000398258 SREBF1P36956 1147 aa3.5□□□□□ -1.85
CD47-203ENST00000398258 ABCG1P45844 678 aa3.5□□□□□ -1.85
CD47-203ENST00000398258 MAP2K6P52564 334 aa3.5□□□□□ -1.85
CD47-203ENST00000398258 NPEPPSP55786 919 aa3.5□□□□□ -1.85
CD47-203ENST00000398258 ZNF280AP59817 542 aaPredicted RBP3.5□□□□□ -1.85
CD47-203ENST00000398258 FAM193AP78312 1265 aa3.5□□□□□ -1.85
CD47-203ENST00000398258 ATP8B2P98198 1209 aa3.5□□□□□ -1.85
CD47-203ENST00000398258 SEMA5AQ13591 1074 aa3.5□□□□□ -1.85
CD47-203ENST00000398258 IL10RAQ13651 578 aa3.5□□□□□ -1.85
CD47-203ENST00000398258 NOMO1Q15155 1222 aa3.5□□□□□ -1.85
CD47-203ENST00000398258 ANO6Q4KMQ2 910 aa3.5□□□□□ -1.85
CD47-203ENST00000398258 SLC4A10Q6U841 1118 aa3.5□□□□□ -1.85
CD47-203ENST00000398258 ARHGEF19Q8IW93 802 aa3.5□□□□□ -1.85
CD47-203ENST00000398258 CMTM4Q8IZR5 234 aa3.5□□□□□ -1.85
CD47-203ENST00000398258 KRT78Q8N1N4 520 aa3.5□□□□□ -1.85
CD47-203ENST00000398258 SUPT20HQ8NEM7 779 aa3.5□□□□□ -1.85
CD47-203ENST00000398258 OR5M3Q8NGP4 307 aa3.5□□□□□ -1.85
CD47-203ENST00000398258 PPP1R35Q8TAP8 253 aa3.5□□□□□ -1.85
CD47-203ENST00000398258 CASKIN2Q8WXE0 1202 aa3.5□□□□□ -1.85
CD47-203ENST00000398258 ST8SIA2Q92186 375 aa3.5□□□□□ -1.85
CD47-203ENST00000398258 PMM1Q92871 262 aa3.5□□□□□ -1.85
CD47-203ENST00000398258 ARL8AQ96BM9 186 aa3.5□□□□□ -1.85
CD47-203ENST00000398258 FAM167AQ96KS9 214 aa3.5□□□□□ -1.85
CD47-203ENST00000398258 SPATA5L1Q9BVQ7 753 aa3.5□□□□□ -1.85
CD47-203ENST00000398258 EPC1Q9H2F5 836 aa3.5□□□□□ -1.85
CD47-203ENST00000398258 MANSC1Q9H8J5 431 aa3.5□□□□□ -1.85
CD47-203ENST00000398258 KMT5AQ9NQR1 393 aa3.5□□□□□ -1.85
CD47-203ENST00000398258 POLHQ9Y253 713 aa3.5□□□□□ -1.85
CD47-203ENST00000398258 ATRNL1Q5VV63 1379 aa3.5□□□□□ -1.85
CD47-203ENST00000398258 LRRC3CA6NJW4 275 aa3.49□□□□□ -1.85
CD47-203ENST00000398258 APAF1O14727 1248 aa3.49□□□□□ -1.85
CD47-203ENST00000398258 TRIM24O15164 1050 aa3.49□□□□□ -1.85
CD47-203ENST00000398258 ADCY6O43306 1168 aa3.49□□□□□ -1.85
CD47-203ENST00000398258 MFAP3LO75121 409 aa3.49□□□□□ -1.85
CD47-203ENST00000398258 NCR1O76036 304 aa3.49□□□□□ -1.85
CD47-203ENST00000398258 ARIH2O95376 493 aa3.49□□□□□ -1.85
CD47-203ENST00000398258 C1RP00736 705 aa3.49□□□□□ -1.85
CD47-203ENST00000398258 IGLV2-14P01704 120 aa3.49□□□□□ -1.85
CD47-203ENST00000398258 AMY1AP04745 511 aa3.49□□□□□ -1.85
CD47-203ENST00000398258 SLC5A1P13866 664 aa3.49□□□□□ -1.85
CD47-203ENST00000398258 APOBEC3AP31941 199 aaPredicted RBP3.49□□□□□ -1.85
CD47-203ENST00000398258 HTR3AP46098 478 aa3.49□□□□□ -1.85
CD47-203ENST00000398258 NKX6-1P78426 367 aaPredicted RBP3.49□□□□□ -1.85
CD47-203ENST00000398258 GPSM2P81274 684 aa3.49□□□□□ -1.85
CD47-203ENST00000398258 TLE1Q04724 770 aa3.49□□□□□ -1.85
CD47-203ENST00000398258 DUSP2Q05923 314 aa3.49□□□□□ -1.85
CD47-203ENST00000398258 TARDBPQ13148 414 aaKnown RBP eCLIP3.49□□□□□ -1.85
CD47-203ENST00000398258 NOGQ13253 232 aa3.49□□□□□ -1.85
CD47-203ENST00000398258 MTM1Q13496 603 aa3.49□□□□□ -1.85
CD47-203ENST00000398258 RAB39AQ14964 217 aa3.49□□□□□ -1.85
CD47-203ENST00000398258 SAFBQ15424 915 aaKnown RBP eCLIP3.49□□□□□ -1.85
CD47-203ENST00000398258 VPS72Q15906 364 aa3.49□□□□□ -1.85
CD47-203ENST00000398258 DCAF17Q5H9S7 520 aaPredicted RBP3.49□□□□□ -1.85
CD47-203ENST00000398258 NPNTQ6UXI9 565 aa3.49□□□□□ -1.85
CD47-203ENST00000398258 KSR2Q6VAB6 950 aa3.49□□□□□ -1.85
CD47-203ENST00000398258 DRC7Q8IY82 874 aa3.49□□□□□ -1.85
CD47-203ENST00000398258 SH2D3CQ8N5H7 860 aa3.49□□□□□ -1.85
CD47-203ENST00000398258 KLHDC4Q8TBB5 520 aa3.49□□□□□ -1.85
CD47-203ENST00000398258 IFI44Q8TCB0 444 aa3.49□□□□□ -1.85
CD47-203ENST00000398258 KAT5Q92993 513 aa3.49□□□□□ -1.85
CD47-203ENST00000398258 RGMAQ96B86 450 aa3.49□□□□□ -1.85
CD47-203ENST00000398258 CDK5RAP3Q96JB5 506 aa3.49□□□□□ -1.85
CD47-203ENST00000398258 CGRRF1Q99675 332 aa3.49□□□□□ -1.85
CD47-203ENST00000398258 GPRC5DQ9NZD1 345 aa3.49□□□□□ -1.85
CD47-203ENST00000398258 STXBP5LQ9Y2K9 1186 aa3.49□□□□□ -1.85
CD47-203ENST00000398258 PCDHA13Q9Y5I0 950 aa3.49□□□□□ -1.85
CD47-203ENST00000398258 GOLIM4O00461 696 aa3.48□□□□□ -1.85
CD47-203ENST00000398258 NRP1O14786 923 aa3.48□□□□□ -1.85
CD47-203ENST00000398258 IKBKBO14920 756 aa3.48□□□□□ -1.85
CD47-203ENST00000398258 PEX14O75381 377 aa3.48□□□□□ -1.85
CD47-203ENST00000398258 ITGA10O75578 1167 aa3.48□□□□□ -1.85
CD47-203ENST00000398258 FTH1P19P0C7X4 201 aa3.48□□□□□ -1.85
CD47-203ENST00000398258 GYPEP15421 78 aa3.48□□□□□ -1.85
CD47-203ENST00000398258 ADSLP30566 484 aaPredicted RBP3.48□□□□□ -1.85
CD47-203ENST00000398258 CXCR5P32302 372 aa3.48□□□□□ -1.85
CD47-203ENST00000398258 TM4SF4P48230 202 aa3.48□□□□□ -1.85
CD47-203ENST00000398258 ZNF81P51508 661 aa3.48□□□□□ -1.85
CD47-203ENST00000398258 MORC3Q14149 939 aa3.48□□□□□ -1.85
CD47-203ENST00000398258 COBLL1Q53SF7 1204 aa3.48□□□□□ -1.85
CD47-203ENST00000398258 MFSD5Q6N075 450 aa3.48□□□□□ -1.85
CD47-203ENST00000398258 SWSAP1Q6NVH7 229 aa3.48□□□□□ -1.85
CD47-203ENST00000398258 ZNF572Q7Z3I7 529 aaPredicted RBP3.48□□□□□ -1.85
CD47-203ENST00000398258 GRASPQ7Z6J2 395 aaPredicted RBP3.48□□□□□ -1.85
CD47-203ENST00000398258 TRMT2AQ8IZ69 625 aaKnown RBP3.48□□□□□ -1.85
CD47-203ENST00000398258 CAMKK1Q8N5S9 505 aa3.48□□□□□ -1.85
CD47-203ENST00000398258 C3orf20Q8ND61 904 aa3.48□□□□□ -1.85
CD47-203ENST00000398258 FAM156AQ8NDB6 213 aa3.48□□□□□ -1.85
CD47-203ENST00000398258 FBXO18Q8NFZ0 1043 aa3.48□□□□□ -1.85
CD47-203ENST00000398258 PLBD2Q8NHP8 589 aa3.48□□□□□ -1.85
CD47-203ENST00000398258 MDM1Q8TC05 714 aa3.48□□□□□ -1.85
CD47-203ENST00000398258 ASB10Q8WXI3 467 aa3.48□□□□□ -1.85
CD47-203ENST00000398258 RPS6KC1Q96S38 1066 aa3.48□□□□□ -1.85
CD47-203ENST00000398258 PDCD2LQ9BRP1 358 aa3.48□□□□□ -1.85
CD47-203ENST00000398258 SLC46A2Q9BY10 475 aa3.48□□□□□ -1.85
CD47-203ENST00000398258 B3GNT5Q9BYG0 378 aa3.48□□□□□ -1.85
CD47-203ENST00000398258 SLC29A3Q9BZD2 475 aa3.48□□□□□ -1.85
CD47-203ENST00000398258 BHMT2Q9H2M3 363 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms