RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 FCARP24071 287 aa11.26□□□□□ -0.61
NEDD8-202ENST00000396828 STAT6P42226 847 aa11.26□□□□□ -0.61
NEDD8-202ENST00000396828 DMP1Q13316 513 aaPredicted RBP11.26□□□□□ -0.61
NEDD8-202ENST00000396828 MRPL58Q14197 206 aaKnown RBP11.26□□□□□ -0.61
NEDD8-202ENST00000396828 MLF2Q15773 248 aaPredicted RBP11.26□□□□□ -0.61
NEDD8-202ENST00000396828 PRSS36Q5K4E3 855 aa11.26□□□□□ -0.61
NEDD8-202ENST00000396828 RRAGBQ5VZM2 374 aa11.26□□□□□ -0.61
NEDD8-202ENST00000396828 SLC8B1Q6J4K2 584 aa11.26□□□□□ -0.61
NEDD8-202ENST00000396828 ANKS3Q6ZW76 656 aa11.26□□□□□ -0.61
NEDD8-202ENST00000396828 USP49Q70CQ1 688 aa11.26□□□□□ -0.61
NEDD8-202ENST00000396828 MTSS1LQ765P7 747 aa11.26□□□□□ -0.61
NEDD8-202ENST00000396828 HS6ST3Q8IZP7 471 aa11.26□□□□□ -0.61
NEDD8-202ENST00000396828 DCLK2Q8N568 766 aa11.26□□□□□ -0.61
NEDD8-202ENST00000396828 PDILTQ8N807 584 aa11.26□□□□□ -0.61
NEDD8-202ENST00000396828 ZNF461Q8TAF7 563 aa11.26□□□□□ -0.61
NEDD8-202ENST00000396828 ZSWIM3Q96MP5 696 aa11.26□□□□□ -0.61
NEDD8-202ENST00000396828 UROC1Q96N76 676 aa11.26□□□□□ -0.61
NEDD8-202ENST00000396828 ACAP3Q96P50 834 aa11.26□□□□□ -0.61
NEDD8-202ENST00000396828 NTPCRQ9BSD7 190 aaKnown RBP11.26□□□□□ -0.61
NEDD8-202ENST00000396828 TCHPQ9BT92 498 aa11.26□□□□□ -0.61
NEDD8-202ENST00000396828 CCDC94Q9BW85 323 aaPredicted RBP11.26□□□□□ -0.61
NEDD8-202ENST00000396828 PANK2Q9BZ23 570 aa11.26□□□□□ -0.61
NEDD8-202ENST00000396828 CLSTN2Q9H4D0 955 aa11.26□□□□□ -0.61
NEDD8-202ENST00000396828 CNTN3Q9P232 1028 aa11.26□□□□□ -0.61
NEDD8-202ENST00000396828 FBXL5Q9UKA1 691 aa11.26□□□□□ -0.61
NEDD8-202ENST00000396828 MYH11P35749 1972 aa11.25□□□□□ -0.61
NEDD8-202ENST00000396828 TRAPPC3O43617 180 aa11.25□□□□□ -0.61
NEDD8-202ENST00000396828 MOSPD3O75425 235 aa11.25□□□□□ -0.61
NEDD8-202ENST00000396828 VNN2O95498 520 aa11.25□□□□□ -0.61
NEDD8-202ENST00000396828 LMNAP02545 664 aaKnown RBP11.25□□□□□ -0.61
NEDD8-202ENST00000396828 MCF2P10911 925 aa11.25□□□□□ -0.61
NEDD8-202ENST00000396828 ATF2P15336 505 aa11.25□□□□□ -0.61
NEDD8-202ENST00000396828 GJA1P17302 382 aa11.25□□□□□ -0.61
NEDD8-202ENST00000396828 PTPN2P17706 415 aa11.25□□□□□ -0.61
NEDD8-202ENST00000396828 YARSP54577 528 aaKnown RBP11.25□□□□□ -0.61
NEDD8-202ENST00000396828 SLC12A3P55017 1021 aa11.25□□□□□ -0.61
NEDD8-202ENST00000396828 FZD5Q13467 585 aa11.25□□□□□ -0.61
NEDD8-202ENST00000396828 KARSQ15046 597 aaKnown RBP11.25□□□□□ -0.61
NEDD8-202ENST00000396828 ARSHQ5FYA8 562 aa11.25□□□□□ -0.61
NEDD8-202ENST00000396828 ZBTB41Q5SVQ8 909 aa11.25□□□□□ -0.61
NEDD8-202ENST00000396828 MPZL3Q6UWV2 235 aa11.25□□□□□ -0.61
NEDD8-202ENST00000396828 KRBA2Q6ZNG9 492 aa11.25□□□□□ -0.61
NEDD8-202ENST00000396828 TMEM161BQ8NDZ6 487 aa11.25□□□□□ -0.61
NEDD8-202ENST00000396828 DHX58Q96C10 678 aa11.25□□□□□ -0.61
NEDD8-202ENST00000396828 DRC1Q96MC2 740 aa11.25□□□□□ -0.61
NEDD8-202ENST00000396828 CORO1BQ9BR76 489 aa11.25□□□□□ -0.61
NEDD8-202ENST00000396828 GZF1Q9H116 711 aaPredicted RBP11.25□□□□□ -0.61
NEDD8-202ENST00000396828 CUEDC2Q9H467 287 aa11.25□□□□□ -0.61
NEDD8-202ENST00000396828 CYP4F11Q9HBI6 524 aa11.25□□□□□ -0.61
NEDD8-202ENST00000396828 HEBP1Q9NRV9 189 aa11.25□□□□□ -0.61
NEDD8-202ENST00000396828 TOPORSQ9NS56 1045 aaPredicted RBP11.25□□□□□ -0.61
NEDD8-202ENST00000396828 TMEM63CQ9P1W3 806 aa11.25□□□□□ -0.61
NEDD8-202ENST00000396828 CEP72Q9P209 647 aa11.25□□□□□ -0.61
NEDD8-202ENST00000396828 ANKFY1Q9P2R3 1169 aa11.25□□□□□ -0.61
NEDD8-202ENST00000396828 TIMM13Q9Y5L4 95 aaPredicted RBP11.25□□□□□ -0.61
NEDD8-202ENST00000396828 NCANO14594 1321 aa11.25□□□□□ -0.61
NEDD8-202ENST00000396828 CEP250Q9BV73 2442 aa11.25□□□□□ -0.61
NEDD8-202ENST00000396828 FAM170BA6NMN3 283 aa11.24□□□□□ -0.61
NEDD8-202ENST00000396828 PRRG1O14668 218 aa11.24□□□□□ -0.61
NEDD8-202ENST00000396828 SLFN14P0C7P3 912 aa11.24□□□□□ -0.61
NEDD8-202ENST00000396828 MAPTP10636 758 aaKnown RBP11.24□□□□□ -0.61
NEDD8-202ENST00000396828 GUCY2CP25092 1073 aa11.24□□□□□ -0.61
NEDD8-202ENST00000396828 TARSP26639 723 aaKnown RBP11.24□□□□□ -0.61
NEDD8-202ENST00000396828 TNFSF9P41273 254 aa11.24□□□□□ -0.61
NEDD8-202ENST00000396828 GUCY2FP51841 1108 aa11.24□□□□□ -0.61
NEDD8-202ENST00000396828 GRM2Q14416 872 aa11.24□□□□□ -0.61
NEDD8-202ENST00000396828 UBXN2BQ14CS0 331 aa11.24□□□□□ -0.61
NEDD8-202ENST00000396828 CAMK4Q16566 473 aa11.24□□□□□ -0.61
NEDD8-202ENST00000396828 ZSCAN23Q3MJ62 389 aa11.24□□□□□ -0.61
NEDD8-202ENST00000396828 FAM78AQ5JUQ0 283 aa11.24□□□□□ -0.61
NEDD8-202ENST00000396828 HYIQ5T013 277 aa11.24□□□□□ -0.61
NEDD8-202ENST00000396828 TSSK4Q6SA08 328 aa11.24□□□□□ -0.61
NEDD8-202ENST00000396828 ELOA2Q8IYF1 753 aaPredicted RBP11.24□□□□□ -0.61
NEDD8-202ENST00000396828 TCEAL8Q8IYN2 117 aa11.24□□□□□ -0.61
NEDD8-202ENST00000396828 KIAA2013Q8IYS2 634 aa11.24□□□□□ -0.61
NEDD8-202ENST00000396828 KCTD17Q8N5Z5 321 aa11.24□□□□□ -0.61
NEDD8-202ENST00000396828 SYT2Q8N9I0 419 aaPredicted RBP11.24□□□□□ -0.61
NEDD8-202ENST00000396828 SPIRE2Q8WWL2 714 aa11.24□□□□□ -0.61
NEDD8-202ENST00000396828 DDX12PQ92771 950 aa11.24□□□□□ -0.61
NEDD8-202ENST00000396828 SUSD3Q96L08 255 aa11.24□□□□□ -0.61
NEDD8-202ENST00000396828 CRISPLD1Q9H336 500 aa11.24□□□□□ -0.61
NEDD8-202ENST00000396828 MAGEF1Q9HAY2 307 aa11.24□□□□□ -0.61
NEDD8-202ENST00000396828 LTB4R2Q9NPC1 389 aa11.24□□□□□ -0.61
NEDD8-202ENST00000396828 SLC38A7Q9NVC3 462 aa11.24□□□□□ -0.61
NEDD8-202ENST00000396828 INSL5Q9Y5Q6 135 aa11.24□□□□□ -0.61
NEDD8-202ENST00000396828 COL4A2P08572 1712 aa11.23□□□□□ -0.61
NEDD8-202ENST00000396828 PPEF2O14830 753 aa11.23□□□□□ -0.61
NEDD8-202ENST00000396828 SYN3O14994 580 aa11.23□□□□□ -0.61
NEDD8-202ENST00000396828 ECI2O75521 394 aa11.23□□□□□ -0.61
NEDD8-202ENST00000396828 TOM1L1O75674 476 aa11.23□□□□□ -0.61
NEDD8-202ENST00000396828 LRG1P02750 347 aa11.23□□□□□ -0.61
NEDD8-202ENST00000396828 OR4Q2P0C623 313 aa11.23□□□□□ -0.61
NEDD8-202ENST00000396828 PLA2G4BP0C869 781 aa11.23□□□□□ -0.61
NEDD8-202ENST00000396828 CXCL8P10145 99 aa11.23□□□□□ -0.61
NEDD8-202ENST00000396828 PLS3P13797 630 aa11.23□□□□□ -0.61
NEDD8-202ENST00000396828 PLCG1P19174 1290 aa11.23□□□□□ -0.61
NEDD8-202ENST00000396828 RPL9P32969 192 aaKnown RBP11.23□□□□□ -0.61
NEDD8-202ENST00000396828 ID4P47928 161 aa11.23□□□□□ -0.61
NEDD8-202ENST00000396828 CDR1P51861 262 aa11.23□□□□□ -0.61
NEDD8-202ENST00000396828 AMPD3Q01432 767 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms