RNA–Protein interactions for RNA: ENST00000395881.7

RTFDC1-203, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-203ENST00000395881 CLCN3P51790 818 aa15.43■□□□□ 0.06
RTFDC1-203ENST00000395881 NCOA4Q13772 614 aa15.43■□□□□ 0.06
RTFDC1-203ENST00000395881 ACAD10Q6JQN1 1059 aa15.43■□□□□ 0.06
RTFDC1-203ENST00000395881 TRIM11Q96F44 468 aa15.43■□□□□ 0.06
RTFDC1-203ENST00000395881 NLRP4Q96MN2 994 aa15.43■□□□□ 0.06
RTFDC1-203ENST00000395881 RPS6KC1Q96S38 1066 aa15.43■□□□□ 0.06
RTFDC1-203ENST00000395881 FUT8Q9BYC5 575 aa15.43■□□□□ 0.06
RTFDC1-203ENST00000395881 SEZ6LQ9BYH1 1024 aa15.43■□□□□ 0.06
RTFDC1-203ENST00000395881 INO80BQ9C086 356 aaPredicted RBP15.43■□□□□ 0.06
RTFDC1-203ENST00000395881 TRPV6Q9H1D0 765 aa15.43■□□□□ 0.06
RTFDC1-203ENST00000395881 IFT122Q9HBG6 1241 aa15.43■□□□□ 0.06
RTFDC1-203ENST00000395881 TMEM39AQ9NV64 488 aa15.43■□□□□ 0.06
RTFDC1-203ENST00000395881 PRKAG2Q9UGJ0 569 aa15.43■□□□□ 0.06
RTFDC1-203ENST00000395881 L1RE1Q9UN81 338 aa15.43■□□□□ 0.06
RTFDC1-203ENST00000395881 TRIP12Q14669 1992 aaPredicted RBP15.42■□□□□ 0.06
RTFDC1-203ENST00000395881 TTLL13PA6NNM8 815 aa15.42■□□□□ 0.06
RTFDC1-203ENST00000395881 KCNK3O14649 394 aa15.42■□□□□ 0.06
RTFDC1-203ENST00000395881 PHACTR2O75167 634 aa15.42■□□□□ 0.06
RTFDC1-203ENST00000395881 MMEP08473 750 aa15.42■□□□□ 0.06
RTFDC1-203ENST00000395881 ZNF286BP0CG31 522 aa15.42■□□□□ 0.06
RTFDC1-203ENST00000395881 MYBL1P10243 752 aa15.42■□□□□ 0.06
RTFDC1-203ENST00000395881 MCF2P10911 925 aa15.42■□□□□ 0.06
RTFDC1-203ENST00000395881 ABCB4P21439 1286 aa15.42■□□□□ 0.06
RTFDC1-203ENST00000395881 TNFRSF8P28908 595 aa15.42■□□□□ 0.06
RTFDC1-203ENST00000395881 BMP8BP34820 402 aa15.42■□□□□ 0.06
RTFDC1-203ENST00000395881 NOP14P78316 857 aaKnown RBP15.42■□□□□ 0.06
RTFDC1-203ENST00000395881 C2orf54Q08AI8 447 aa15.42■□□□□ 0.06
RTFDC1-203ENST00000395881 CLEC16AQ2KHT3 1053 aa15.42■□□□□ 0.06
RTFDC1-203ENST00000395881 ZNF568Q3ZCX4 644 aa15.42■□□□□ 0.06
RTFDC1-203ENST00000395881 MTHFD1LQ6UB35 978 aa15.42■□□□□ 0.06
RTFDC1-203ENST00000395881 HDXQ7Z353 690 aa15.42■□□□□ 0.06
RTFDC1-203ENST00000395881 ZNF410Q86VK4 478 aa15.42■□□□□ 0.06
RTFDC1-203ENST00000395881 USP38Q8NB14 1042 aa15.42■□□□□ 0.06
RTFDC1-203ENST00000395881 OR5B17Q8NGF7 314 aa15.42■□□□□ 0.06
RTFDC1-203ENST00000395881 ARHGEF26Q96DR7 871 aa15.42■□□□□ 0.06
RTFDC1-203ENST00000395881 PI4K2AQ9BTU6 479 aa15.42■□□□□ 0.06
RTFDC1-203ENST00000395881 CARD9Q9H257 536 aa15.42■□□□□ 0.06
RTFDC1-203ENST00000395881 OSGEPQ9NPF4 335 aa15.42■□□□□ 0.06
RTFDC1-203ENST00000395881 ANK1P16157 1881 aa15.42■□□□□ 0.06
RTFDC1-203ENST00000395881 CCDC188H7C350 402 aa15.41■□□□□ 0.06
RTFDC1-203ENST00000395881 MAP2K7O14733 419 aa15.41■□□□□ 0.06
RTFDC1-203ENST00000395881 KRT5P13647 590 aa15.41■□□□□ 0.06
RTFDC1-203ENST00000395881 TNNC1P63316 161 aa15.41■□□□□ 0.06
RTFDC1-203ENST00000395881 PCBP1Q15365 356 aaKnown RBP eCLIP15.41■□□□□ 0.06
RTFDC1-203ENST00000395881 SGSM1Q2NKQ1 1148 aa15.41■□□□□ 0.06
RTFDC1-203ENST00000395881 LMBRD2Q68DH5 695 aaPredicted RBP15.41■□□□□ 0.06
RTFDC1-203ENST00000395881 KAT6AQ92794 2004 aa15.41■□□□□ 0.06
RTFDC1-203ENST00000395881 BADQ92934 168 aa15.41■□□□□ 0.06
RTFDC1-203ENST00000395881 PSMB7Q99436 277 aa15.41■□□□□ 0.06
RTFDC1-203ENST00000395881 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.41■□□□□ 0.069e-7■□□□□ 10.7
RTFDC1-203ENST00000395881 AVENQ9NQS1 362 aaPredicted RBP15.41■□□□□ 0.06
RTFDC1-203ENST00000395881 HAS3O00219 553 aa15.41■□□□□ 0.06
RTFDC1-203ENST00000395881 PGRMC1O00264 195 aaKnown RBP15.41■□□□□ 0.06
RTFDC1-203ENST00000395881 TLR3O15455 904 aaKnown RBP15.41■□□□□ 0.06
RTFDC1-203ENST00000395881 F2P00734 622 aa15.41■□□□□ 0.06
RTFDC1-203ENST00000395881 UNGP13051 313 aaPredicted RBP15.41■□□□□ 0.06
RTFDC1-203ENST00000395881 TNFSF9P41273 254 aa15.41■□□□□ 0.06
RTFDC1-203ENST00000395881 PSEN2P49810 448 aa15.41■□□□□ 0.06
RTFDC1-203ENST00000395881 PPFIA1Q13136 1202 aa15.41■□□□□ 0.06
RTFDC1-203ENST00000395881 PPP2R5EQ16537 467 aa15.41■□□□□ 0.06
RTFDC1-203ENST00000395881 AMHR2Q16671 573 aa15.41■□□□□ 0.06
RTFDC1-203ENST00000395881 HABP4Q5JVS0 413 aaKnown RBP15.41■□□□□ 0.06
RTFDC1-203ENST00000395881 ZBTB33Q86T24 672 aa15.41■□□□□ 0.06
RTFDC1-203ENST00000395881 DNAAF5Q86Y56 855 aa15.41■□□□□ 0.06
RTFDC1-203ENST00000395881 UBR7Q8N806 425 aa15.41■□□□□ 0.06
RTFDC1-203ENST00000395881 VCPIP1Q96JH7 1222 aa15.41■□□□□ 0.06
RTFDC1-203ENST00000395881 CDT1Q9H211 546 aa15.41■□□□□ 0.06
RTFDC1-203ENST00000395881 APOBEC3GQ9HC16 384 aaKnown RBP15.41■□□□□ 0.06
RTFDC1-203ENST00000395881 RBM12Q9NTZ6 932 aaKnown RBP15.41■□□□□ 0.06
RTFDC1-203ENST00000395881 TRMT13Q9NUP7 481 aaKnown RBP15.41■□□□□ 0.06
RTFDC1-203ENST00000395881 CTTNBP2NLQ9P2B4 639 aa15.41■□□□□ 0.06
RTFDC1-203ENST00000395881 PACSIN2Q9UNF0 486 aaPredicted RBP15.41■□□□□ 0.06
RTFDC1-203ENST00000395881 COG5Q9UP83 839 aa15.41■□□□□ 0.06
RTFDC1-203ENST00000395881 SEC31AO94979 1220 aaKnown RBP15.4■□□□□ 0.06
RTFDC1-203ENST00000395881 TNNC2P02585 160 aa15.4■□□□□ 0.06
RTFDC1-203ENST00000395881 CYP1A1P04798 512 aaPredicted RBP15.4■□□□□ 0.06
RTFDC1-203ENST00000395881 HARSP12081 509 aaKnown RBP15.4■□□□□ 0.06
RTFDC1-203ENST00000395881 RAG1P15918 1043 aa15.4■□□□□ 0.06
RTFDC1-203ENST00000395881 ZNF132P52740 706 aa15.4■□□□□ 0.06
RTFDC1-203ENST00000395881 CENPCQ03188 943 aa15.4■□□□□ 0.06
RTFDC1-203ENST00000395881 GRIK4Q16099 956 aa15.4■□□□□ 0.06
RTFDC1-203ENST00000395881 FAM47CQ5HY64 1035 aa15.4■□□□□ 0.06
RTFDC1-203ENST00000395881 TAF3Q5VWG9 929 aa15.4■□□□□ 0.06
RTFDC1-203ENST00000395881 C8orf74Q6P047 294 aa15.4■□□□□ 0.06
RTFDC1-203ENST00000395881 CCNI2Q6ZMN8 369 aaPredicted RBP15.4■□□□□ 0.06
RTFDC1-203ENST00000395881 EIF1ADQ8N9N8 165 aaKnown RBP15.4■□□□□ 0.06
RTFDC1-203ENST00000395881 MS4A14Q96JA4 679 aa15.4■□□□□ 0.06
RTFDC1-203ENST00000395881 NAP1L3Q99457 506 aaPredicted RBP15.4■□□□□ 0.06
RTFDC1-203ENST00000395881 LBHD1Q9BQE6 289 aaPredicted RBP15.4■□□□□ 0.06
RTFDC1-203ENST00000395881 FAM124BQ9H5Z6 455 aaPredicted RBP15.4■□□□□ 0.06
RTFDC1-203ENST00000395881 ASB7Q9H672 318 aa15.4■□□□□ 0.06
RTFDC1-203ENST00000395881 MINDY3Q9H8M7 445 aa15.4■□□□□ 0.06
RTFDC1-203ENST00000395881 VIPAS39Q9H9C1 493 aa15.4■□□□□ 0.06
RTFDC1-203ENST00000395881 RPF1Q9H9Y2 349 aaKnown RBP15.4■□□□□ 0.06
RTFDC1-203ENST00000395881 STIM2Q9P246 746 aa15.4■□□□□ 0.06
RTFDC1-203ENST00000395881 NUB1Q9Y5A7 615 aa15.4■□□□□ 0.06
RTFDC1-203ENST00000395881 DDX3YO15523 660 aaKnown RBP15.39■□□□□ 0.05
RTFDC1-203ENST00000395881 CLSTN1O94985 981 aa15.39■□□□□ 0.05
RTFDC1-203ENST00000395881 TIMP1P01033 207 aa15.39■□□□□ 0.05
RTFDC1-203ENST00000395881 YWHAEP62258 255 aaKnown RBP15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms