RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 UVRAGQ9P2Y5 699 aa10.9□□□□□ -0.66
COL4A6-203ENST00000394872 USP31Q70CQ4 1352 aa10.9□□□□□ -0.66
COL4A6-203ENST00000394872 SUPT3HO75486 399 aa10.9□□□□□ -0.67
COL4A6-203ENST00000394872 ARMC6Q6NXE6 501 aa10.9□□□□□ -0.67
COL4A6-203ENST00000394872 METTL16Q86W50 562 aaKnown RBP10.9□□□□□ -0.67
COL4A6-203ENST00000394872 ABI2Q9NYB9 513 aaPredicted RBP10.9□□□□□ -0.67
COL4A6-203ENST00000394872 IGSF9BQ9UPX0 1349 aa10.9□□□□□ -0.67
COL4A6-203ENST00000394872 MYMKA6NI61 221 aa10.89□□□□□ -0.67
COL4A6-203ENST00000394872 GOLGA8RI6L899 631 aa10.89□□□□□ -0.67
COL4A6-203ENST00000394872 ODC1P11926 461 aa10.89□□□□□ -0.67
COL4A6-203ENST00000394872 PTRHD1Q6GMV3 140 aaKnown RBP10.89□□□□□ -0.67
COL4A6-203ENST00000394872 HS6ST3Q8IZP7 471 aa10.89□□□□□ -0.67
COL4A6-203ENST00000394872 CD274Q9NZQ7 290 aa10.89□□□□□ -0.67
COL4A6-203ENST00000394872 CDC42BPAQ5VT25 1732 aa10.89□□□□□ -0.67
COL4A6-203ENST00000394872 UBE2Q2LH0YL09 131 aa10.89□□□□□ -0.67
COL4A6-203ENST00000394872 CCDC22O60826 627 aa10.89□□□□□ -0.67
COL4A6-203ENST00000394872 EFCAB14O75071 495 aa10.89□□□□□ -0.67
COL4A6-203ENST00000394872 USP10Q14694 798 aaKnown RBP10.89□□□□□ -0.67
COL4A6-203ENST00000394872 AGBL3Q8NEM8 1001 aa10.89□□□□□ -0.67
COL4A6-203ENST00000394872 ZKSCAN4Q969J2 545 aaPredicted RBP10.89□□□□□ -0.67
COL4A6-203ENST00000394872 SLITRK1Q96PX8 696 aa10.89□□□□□ -0.67
COL4A6-203ENST00000394872 SUPT3HB4E1H0 165 aa10.89□□□□□ -0.67
COL4A6-203ENST00000394872 NCAM1P13591 858 aa10.89□□□□□ -0.67
COL4A6-203ENST00000394872 NLRP11P59045 1033 aaKnown RBP10.89□□□□□ -0.67
COL4A6-203ENST00000394872 ITPK1Q13572 414 aa10.89□□□□□ -0.67
COL4A6-203ENST00000394872 STAT4Q14765 748 aa10.89□□□□□ -0.67
COL4A6-203ENST00000394872 TRADDQ15628 312 aa10.89□□□□□ -0.67
COL4A6-203ENST00000394872 BARGINQ6ZT62 677 aa10.89□□□□□ -0.67
COL4A6-203ENST00000394872 CHSY1Q86X52 802 aa10.89□□□□□ -0.67
COL4A6-203ENST00000394872 HPDLQ96IR7 371 aa10.89□□□□□ -0.67
COL4A6-203ENST00000394872 COLEC11Q9BWP8 271 aa10.89□□□□□ -0.67
COL4A6-203ENST00000394872 ANGPT2O15123 496 aa10.89□□□□□ -0.67
COL4A6-203ENST00000394872 STAG3L1P0CL83 205 aa10.89□□□□□ -0.67
COL4A6-203ENST00000394872 TSGA10IPQ3SY00 556 aa10.89□□□□□ -0.67
COL4A6-203ENST00000394872 PPP1R2P1Q96PQ5 205 aa10.89□□□□□ -0.67
COL4A6-203ENST00000394872 GPR63Q9BZJ6 419 aa10.89□□□□□ -0.67
COL4A6-203ENST00000394872 TMEM8AQ9HCN3 771 aa10.89□□□□□ -0.67
COL4A6-203ENST00000394872 KCNH7Q9NS40 1196 aa10.89□□□□□ -0.67
COL4A6-203ENST00000394872 PRG3Q9Y2Y8 225 aaPredicted RBP10.89□□□□□ -0.67
COL4A6-203ENST00000394872 CEP152O94986 1710 aa10.89□□□□□ -0.67
COL4A6-203ENST00000394872 CSF1RP07333 972 aa10.89□□□□□ -0.67
COL4A6-203ENST00000394872 GPD1P21695 349 aa10.89□□□□□ -0.67
COL4A6-203ENST00000394872 DPYDQ12882 1025 aa10.89□□□□□ -0.67
COL4A6-203ENST00000394872 ARHGAP18Q8N392 663 aa10.89□□□□□ -0.67
COL4A6-203ENST00000394872 ZNF512BQ96KM6 892 aaPredicted RBP10.89□□□□□ -0.67
COL4A6-203ENST00000394872 KLK14Q9P0G3 267 aa10.89□□□□□ -0.67
COL4A6-203ENST00000394872 FAM200BP0CF97 657 aa10.89□□□□□ -0.67
COL4A6-203ENST00000394872 ABCE1P61221 599 aaKnown RBP10.89□□□□□ -0.67
COL4A6-203ENST00000394872 KRT35Q92764 455 aa10.89□□□□□ -0.67
COL4A6-203ENST00000394872 L3MBTL3Q96JM7 780 aaPredicted RBP10.89□□□□□ -0.67
COL4A6-203ENST00000394872 RIT2Q99578 217 aa10.89□□□□□ -0.67
COL4A6-203ENST00000394872 SPATA16Q9BXB7 569 aa10.89□□□□□ -0.67
COL4A6-203ENST00000394872 METTL5Q9NRN9 209 aaKnown RBP10.89□□□□□ -0.67
COL4A6-203ENST00000394872 C20orf96Q9NUD7 363 aaPredicted RBP10.89□□□□□ -0.67
COL4A6-203ENST00000394872 EIF3DO15371 548 aaKnown RBP eCLIP10.88□□□□□ -0.67
COL4A6-203ENST00000394872 PHF2O75151 1096 aa10.88□□□□□ -0.67
COL4A6-203ENST00000394872 GTF2H1P32780 548 aa10.88□□□□□ -0.67
COL4A6-203ENST00000394872 TAF6P49848 677 aa10.88□□□□□ -0.67
COL4A6-203ENST00000394872 GPAT2Q6NUI2 795 aa10.88□□□□□ -0.67
COL4A6-203ENST00000394872 FBXO33Q7Z6M2 555 aa10.88□□□□□ -0.67
COL4A6-203ENST00000394872 IPMKQ8NFU5 416 aa10.88□□□□□ -0.67
COL4A6-203ENST00000394872 MS4A14Q96JA4 679 aa10.88□□□□□ -0.67
COL4A6-203ENST00000394872 ENTPD7Q9NQZ7 604 aa10.88□□□□□ -0.67
COL4A6-203ENST00000394872 ZC3H7BQ9UGR2 993 aaKnown RBP10.88□□□□□ -0.67
COL4A6-203ENST00000394872 CLTCQ00610 1675 aaKnown RBP10.88□□□□□ -0.67
COL4A6-203ENST00000394872 H0Y626 953 aa10.88□□□□□ -0.67
COL4A6-203ENST00000394872 ITGB3P05106 788 aa10.88□□□□□ -0.67
COL4A6-203ENST00000394872 ALDH18A1P54886 795 aaKnown RBP10.88□□□□□ -0.67
COL4A6-203ENST00000394872 LRRC74AQ0VAA2 488 aa10.88□□□□□ -0.67
COL4A6-203ENST00000394872 AARS2Q5JTZ9 985 aaKnown RBP10.88□□□□□ -0.67
COL4A6-203ENST00000394872 EFHC1Q5JVL4 640 aa10.88□□□□□ -0.67
COL4A6-203ENST00000394872 XRRA1Q6P2D8 792 aa10.88□□□□□ -0.67
COL4A6-203ENST00000394872 CATSPER3Q86XQ3 398 aa10.88□□□□□ -0.67
COL4A6-203ENST00000394872 ATP6V1G3Q96LB4 118 aa10.88□□□□□ -0.67
COL4A6-203ENST00000394872 YY1AP1Q9H869 796 aa10.88□□□□□ -0.67
COL4A6-203ENST00000394872 UCHL3P15374 230 aa10.88□□□□□ -0.67
COL4A6-203ENST00000394872 IL10P22301 178 aa10.88□□□□□ -0.67
COL4A6-203ENST00000394872 HSPA9P38646 679 aaKnown RBP10.88□□□□□ -0.67
COL4A6-203ENST00000394872 BLVRAP53004 296 aa10.88□□□□□ -0.67
COL4A6-203ENST00000394872 GALCP54803 685 aa10.88□□□□□ -0.67
COL4A6-203ENST00000394872 SLC18A3Q16572 532 aa10.88□□□□□ -0.67
COL4A6-203ENST00000394872 ZRANB3Q5FWF4 1079 aa10.88□□□□□ -0.67
COL4A6-203ENST00000394872 RSPH10B2B2RC85 870 aa10.88□□□□□ -0.67
COL4A6-203ENST00000394872 ZNF263O14978 683 aa10.88□□□□□ -0.67
COL4A6-203ENST00000394872 RSPH10BP0C881 870 aa10.88□□□□□ -0.67
COL4A6-203ENST00000394872 PNPLA4P41247 253 aa10.88□□□□□ -0.67
COL4A6-203ENST00000394872 PDK1Q15118 436 aa10.88□□□□□ -0.67
COL4A6-203ENST00000394872 SLC15A2Q16348 729 aa10.88□□□□□ -0.67
COL4A6-203ENST00000394872 CCDC144BQ3MJ40 725 aa10.88□□□□□ -0.67
COL4A6-203ENST00000394872 NLRP14Q86W24 1093 aa10.88□□□□□ -0.67
COL4A6-203ENST00000394872 ICA1LQ8NDH6 482 aa10.88□□□□□ -0.67
COL4A6-203ENST00000394872 PI4K2AQ9BTU6 479 aa10.88□□□□□ -0.67
COL4A6-203ENST00000394872 SPATA31A5Q5VU36 1347 aa10.88□□□□□ -0.67
COL4A6-203ENST00000394872 SPATA31A7Q8IWB4 1347 aa10.88□□□□□ -0.67
COL4A6-203ENST00000394872 CNTNAP4Q9C0A0 1308 aa10.88□□□□□ -0.67
COL4A6-203ENST00000394872 DAB2P98082 770 aa10.88□□□□□ -0.67
COL4A6-203ENST00000394872 UGP2Q16851 508 aa10.88□□□□□ -0.67
COL4A6-203ENST00000394872 PAN2Q504Q3 1202 aaKnown RBP10.88□□□□□ -0.67
COL4A6-203ENST00000394872 WDR48Q8TAF3 677 aa10.88□□□□□ -0.67
COL4A6-203ENST00000394872 TRABDQ9H4I3 376 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms