RNA–Protein interactions for RNA: ENST00000394164.5

PSEN1-204, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-204ENST00000394164 PGAP2Q9UHJ9 254 aa10.57□□□□□ -0.72
PSEN1-204ENST00000394164 SCOCQ9UIL1 159 aa10.57□□□□□ -0.72
PSEN1-204ENST00000394164 NVLO15381 856 aaKnown RBP10.57□□□□□ -0.72
PSEN1-204ENST00000394164 HMGB2P26583 209 aaKnown RBP10.57□□□□□ -0.72
PSEN1-204ENST00000394164 KCNJ1P48048 391 aa10.57□□□□□ -0.72
PSEN1-204ENST00000394164 ACOT2P49753 483 aa10.57□□□□□ -0.72
PSEN1-204ENST00000394164 CACNA2D1P54289 1103 aa10.57□□□□□ -0.72
PSEN1-204ENST00000394164 PSMC5P62195 406 aa10.57□□□□□ -0.72
PSEN1-204ENST00000394164 RASIP1Q5U651 963 aa10.57□□□□□ -0.72
PSEN1-204ENST00000394164 DUPD1Q68J44 220 aa10.57□□□□□ -0.72
PSEN1-204ENST00000394164 SPOPLQ6IQ16 392 aa10.57□□□□□ -0.72
PSEN1-204ENST00000394164 PASD1Q8IV76 773 aa10.57□□□□□ -0.72
PSEN1-204ENST00000394164 GBP7Q8N8V2 638 aaPredicted RBP10.57□□□□□ -0.72
PSEN1-204ENST00000394164 EIF1ADQ8N9N8 165 aaKnown RBP10.57□□□□□ -0.72
PSEN1-204ENST00000394164 GBP5Q96PP8 586 aa10.57□□□□□ -0.72
PSEN1-204ENST00000394164 MKNK1Q9BUB5 465 aa10.57□□□□□ -0.72
PSEN1-204ENST00000394164 DENND2DQ9H6A0 471 aaPredicted RBP10.57□□□□□ -0.72
PSEN1-204ENST00000394164 TMEM206Q9H813 350 aa10.57□□□□□ -0.72
PSEN1-204ENST00000394164 TBX20Q9UMR3 447 aa10.57□□□□□ -0.72
PSEN1-204ENST00000394164 ADGRA3Q8IWK6 1321 aa10.57□□□□□ -0.72
PSEN1-204ENST00000394164 WDR64B1ANS9 1081 aa10.56□□□□□ -0.72
PSEN1-204ENST00000394164 TBC1D12O60347 775 aa10.56□□□□□ -0.72
PSEN1-204ENST00000394164 NUDT17P0C025 328 aa10.56□□□□□ -0.72
PSEN1-204ENST00000394164 CCNG1P51959 295 aa10.56□□□□□ -0.72
PSEN1-204ENST00000394164 DMP1Q13316 513 aaPredicted RBP10.56□□□□□ -0.72
PSEN1-204ENST00000394164 DALRD3Q5D0E6 543 aaKnown RBP10.56□□□□□ -0.72
PSEN1-204ENST00000394164 ANGEL2Q5VTE6 544 aaKnown RBP10.56□□□□□ -0.72
PSEN1-204ENST00000394164 OR52E8Q6IFG1 317 aa10.56□□□□□ -0.72
PSEN1-204ENST00000394164 SYCE1Q8N0S2 351 aa10.56□□□□□ -0.72
PSEN1-204ENST00000394164 ASAP3Q8TDY4 903 aa10.56□□□□□ -0.72
PSEN1-204ENST00000394164 TBC1D10AQ9BXI6 508 aa10.56□□□□□ -0.72
PSEN1-204ENST00000394164 SUCLA2Q9P2R7 463 aaPredicted RBP10.56□□□□□ -0.72
PSEN1-204ENST00000394164 LNPEPQ9UIQ6 1025 aa10.56□□□□□ -0.72
PSEN1-204ENST00000394164 RIPK2O43353 540 aa10.56□□□□□ -0.72
PSEN1-204ENST00000394164 SPOPO43791 374 aa10.56□□□□□ -0.72
PSEN1-204ENST00000394164 GJB6O95452 261 aa10.56□□□□□ -0.72
PSEN1-204ENST00000394164 TMEM253P0C7T8 217 aa10.56□□□□□ -0.72
PSEN1-204ENST00000394164 BRAFP15056 766 aa10.56□□□□□ -0.72
PSEN1-204ENST00000394164 COMTP21964 271 aa10.56□□□□□ -0.72
PSEN1-204ENST00000394164 GSTT1P30711 240 aa10.56□□□□□ -0.72
PSEN1-204ENST00000394164 SCARA3Q6AZY7 606 aa10.56□□□□□ -0.72
PSEN1-204ENST00000394164 SRRM1Q8IYB3 904 aaKnown RBP10.56□□□□□ -0.72
PSEN1-204ENST00000394164 HES6Q96HZ4 224 aa10.56□□□□□ -0.72
PSEN1-204ENST00000394164 MOV10L1Q9BXT6 1211 aaKnown RBP10.56□□□□□ -0.72
PSEN1-204ENST00000394164 ANKFY1Q9P2R3 1169 aa10.56□□□□□ -0.72
PSEN1-204ENST00000394164 STXBP5LQ9Y2K9 1186 aa10.56□□□□□ -0.72
PSEN1-204ENST00000394164 KIAA0391O15091 583 aaKnown RBP10.55□□□□□ -0.72
PSEN1-204ENST00000394164 DDX3YO15523 660 aaKnown RBP10.55□□□□□ -0.72
PSEN1-204ENST00000394164 TPP2P29144 1249 aaPredicted RBP10.55□□□□□ -0.72
PSEN1-204ENST00000394164 POU5F1Q01860 360 aaKnown RBP10.55□□□□□ -0.72
PSEN1-204ENST00000394164 DNAJC3Q13217 504 aa10.55□□□□□ -0.72
PSEN1-204ENST00000394164 KHDC1Q4VXA5 237 aaKnown RBP10.55□□□□□ -0.72
PSEN1-204ENST00000394164 VSTM1Q6UX27 236 aa10.55□□□□□ -0.72
PSEN1-204ENST00000394164 PRUNE1Q86TP1 453 aa10.55□□□□□ -0.72
PSEN1-204ENST00000394164 CCDC60Q8IWA6 550 aaPredicted RBP10.55□□□□□ -0.72
PSEN1-204ENST00000394164 LRRC8CQ8TDW0 803 aa10.55□□□□□ -0.72
PSEN1-204ENST00000394164 CPA5Q8WXQ8 436 aa10.55□□□□□ -0.72
PSEN1-204ENST00000394164 ZNF653Q96CK0 615 aa10.55□□□□□ -0.72
PSEN1-204ENST00000394164 MRRFQ96E11 262 aaKnown RBP10.55□□□□□ -0.72
PSEN1-204ENST00000394164 ZBTB45Q96K62 511 aaPredicted RBP10.55□□□□□ -0.72
PSEN1-204ENST00000394164 PITPNM3Q9BZ71 974 aa10.55□□□□□ -0.72
PSEN1-204ENST00000394164 PREBQ9HCU5 417 aa10.55□□□□□ -0.72
PSEN1-204ENST00000394164 TBC1D22BQ9NU19 505 aa10.55□□□□□ -0.72
PSEN1-204ENST00000394164 ANKRD62A6NC57 917 aa10.55□□□□□ -0.72
PSEN1-204ENST00000394164 BHMG1C9JSJ3 638 aaPredicted RBP10.55□□□□□ -0.72
PSEN1-204ENST00000394164 NFKBIEO00221 500 aa10.55□□□□□ -0.72
PSEN1-204ENST00000394164 CREB3O43889 395 aa10.55□□□□□ -0.72
PSEN1-204ENST00000394164 SPAG7O75391 227 aa10.55□□□□□ -0.72
PSEN1-204ENST00000394164 SPATA31D3P0C874 917 aa10.55□□□□□ -0.72
PSEN1-204ENST00000394164 TNNI1P19237 187 aa10.55□□□□□ -0.72
PSEN1-204ENST00000394164 CNTN2Q02246 1040 aa10.55□□□□□ -0.72
PSEN1-204ENST00000394164 SETDB1Q15047 1291 aa10.55□□□□□ -0.72
PSEN1-204ENST00000394164 RCN1Q15293 331 aa10.55□□□□□ -0.72
PSEN1-204ENST00000394164 TRIP13Q15645 432 aaPredicted RBP10.55□□□□□ -0.72
PSEN1-204ENST00000394164 SPATA31D4Q6ZUB0 917 aa10.55□□□□□ -0.72
PSEN1-204ENST00000394164 TMEM161BQ8NDZ6 487 aa10.55□□□□□ -0.72
PSEN1-204ENST00000394164 SCG3Q8WXD2 468 aaKnown RBP10.55□□□□□ -0.72
PSEN1-204ENST00000394164 PWWP2AQ96N64 755 aa10.55□□□□□ -0.72
PSEN1-204ENST00000394164 NDNQ99608 321 aa10.55□□□□□ -0.72
PSEN1-204ENST00000394164 STRA6Q9BX79 667 aa10.55□□□□□ -0.72
PSEN1-204ENST00000394164 SLCO1B3Q9NPD5 702 aa10.55□□□□□ -0.72
PSEN1-204ENST00000394164 TXLNGQ9NUQ3 528 aa10.55□□□□□ -0.72
PSEN1-204ENST00000394164 KCND2Q9NZV8 630 aa10.55□□□□□ -0.72
PSEN1-204ENST00000394164 NENFQ9UMX5 172 aa10.55□□□□□ -0.72
PSEN1-204ENST00000394164 PFASO15067 1338 aa10.55□□□□□ -0.72
PSEN1-204ENST00000394164 KRT36O76013 467 aa10.55□□□□□ -0.72
PSEN1-204ENST00000394164 RGS20O76081 388 aa10.55□□□□□ -0.72
PSEN1-204ENST00000394164 ZBTB48P10074 688 aaPredicted RBP10.55□□□□□ -0.72
PSEN1-204ENST00000394164 CHRNB2P17787 502 aa10.55□□□□□ -0.72
PSEN1-204ENST00000394164 VPS41P49754 854 aa10.55□□□□□ -0.72
PSEN1-204ENST00000394164 PTENP60484 403 aa10.55□□□□□ -0.72
PSEN1-204ENST00000394164 LBRQ14739 615 aaKnown RBP10.55□□□□□ -0.72
PSEN1-204ENST00000394164 SLC39A4Q6P5W5 647 aa10.55□□□□□ -0.72
PSEN1-204ENST00000394164 SLFN11Q7Z7L1 901 aa10.55□□□□□ -0.72
PSEN1-204ENST00000394164 EPS8L1Q8TE68 723 aa10.55□□□□□ -0.72
PSEN1-204ENST00000394164 CNKSR2Q8WXI2 1034 aa10.55□□□□□ -0.72
PSEN1-204ENST00000394164 NUP85Q9BW27 656 aa10.55□□□□□ -0.72
PSEN1-204ENST00000394164 GRHL1Q9NZI5 618 aa10.55□□□□□ -0.72
PSEN1-204ENST00000394164 RGS17Q9UGC6 210 aaPredicted RBP10.55□□□□□ -0.72
PSEN1-204ENST00000394164 PCDHA10Q9Y5I2 948 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms