RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 TWF1Q12792 350 aa18.02■□□□□ 0.48
PTPRK-208ENST00000392449 TANGO2Q6ICL3 276 aa18.02■□□□□ 0.48
PTPRK-208ENST00000392449 PHLDB3Q6NSJ2 640 aa18.02■□□□□ 0.48
PTPRK-208ENST00000392449 RTL10Q7L3V2 364 aa18.02■□□□□ 0.48
PTPRK-208ENST00000392449 SFR1Q86XK3 245 aa18.02■□□□□ 0.48
PTPRK-208ENST00000392449 MAP4K3Q8IVH8 894 aa18.02■□□□□ 0.48
PTPRK-208ENST00000392449 CRISPLD1Q9H336 500 aa18.02■□□□□ 0.48
PTPRK-208ENST00000392449 CPSF3Q9UKF6 684 aaKnown RBP18.02■□□□□ 0.48
PTPRK-208ENST00000392449 SIT1Q9Y3P8 196 aa18.02■□□□□ 0.48
PTPRK-208ENST00000392449 MTF2Q9Y483 593 aaPredicted RBP18.02■□□□□ 0.48
PTPRK-208ENST00000392449 SPTLC1O15269 473 aa18.01■□□□□ 0.47
PTPRK-208ENST00000392449 AARSP49588 968 aaKnown RBP eCLIP18.01■□□□□ 0.47
PTPRK-208ENST00000392449 TPGS2Q68CL5 300 aa18.01■□□□□ 0.47
PTPRK-208ENST00000392449 DSTYKQ6XUX3 929 aa18.01■□□□□ 0.47
PTPRK-208ENST00000392449 PJA1Q8NG27 643 aa18.01■□□□□ 0.47
PTPRK-208ENST00000392449 ZSWIM3Q96MP5 696 aa18.01■□□□□ 0.47
PTPRK-208ENST00000392449 TMEM209Q96SK2 561 aa18.01■□□□□ 0.47
PTPRK-208ENST00000392449 TBC1D7Q9P0N9 293 aa18.01■□□□□ 0.47
PTPRK-208ENST00000392449 AFF4Q9UHB7 1163 aaKnown RBP18.01■□□□□ 0.47
PTPRK-208ENST00000392449 SCN1AP35498 2009 aa18.01■□□□□ 0.47
PTPRK-208ENST00000392449 WDR87Q6ZQQ6 2873 aa18.01■□□□□ 0.47
PTPRK-208ENST00000392449 MYMKA6NI61 221 aa18.01■□□□□ 0.47
PTPRK-208ENST00000392449 ADRB2P07550 413 aa18.01■□□□□ 0.47
PTPRK-208ENST00000392449 CYP3A5P20815 502 aa18.01■□□□□ 0.47
PTPRK-208ENST00000392449 FCARP24071 287 aa18.01■□□□□ 0.47
PTPRK-208ENST00000392449 STARD6P59095 220 aa18.01■□□□□ 0.47
PTPRK-208ENST00000392449 KCNA1Q09470 495 aa18.01■□□□□ 0.47
PTPRK-208ENST00000392449 GRM2Q14416 872 aa18.01■□□□□ 0.47
PTPRK-208ENST00000392449 MLF2Q15773 248 aaPredicted RBP18.01■□□□□ 0.47
PTPRK-208ENST00000392449 SLC44A4Q53GD3 710 aa18.01■□□□□ 0.47
PTPRK-208ENST00000392449 SPATA1Q5VX52 437 aa18.01■□□□□ 0.47
PTPRK-208ENST00000392449 TTC9BQ8N6N2 239 aa18.01■□□□□ 0.47
PTPRK-208ENST00000392449 AVENQ9NQS1 362 aaPredicted RBP18.01■□□□□ 0.47
PTPRK-208ENST00000392449 GDE1Q9NZC3 331 aa18.01■□□□□ 0.47
PTPRK-208ENST00000392449 A0A087X0B3 334 aa18■□□□□ 0.47
PTPRK-208ENST00000392449 MOSPD3O75425 235 aa18■□□□□ 0.47
PTPRK-208ENST00000392449 OAZ2O95190 189 aa18■□□□□ 0.47
PTPRK-208ENST00000392449 MYL4P12829 197 aa18■□□□□ 0.47
PTPRK-208ENST00000392449 PDCP20941 246 aa18■□□□□ 0.47
PTPRK-208ENST00000392449 LILRA4P59901 499 aa18■□□□□ 0.47
PTPRK-208ENST00000392449 FAM78AQ5JUQ0 283 aa18■□□□□ 0.47
PTPRK-208ENST00000392449 ADALQ6DHV7 355 aa18■□□□□ 0.47
PTPRK-208ENST00000392449 PDZD4Q76G19 769 aaPredicted RBP18■□□□□ 0.47
PTPRK-208ENST00000392449 KRI1Q8N9T8 703 aaKnown RBP18■□□□□ 0.47
PTPRK-208ENST00000392449 PANK2Q9BZ23 570 aa18■□□□□ 0.47
PTPRK-208ENST00000392449 YIPF1Q9Y548 306 aa18■□□□□ 0.47
PTPRK-208ENST00000392449 SRPRBQ9Y5M8 271 aaKnown RBP18■□□□□ 0.47
PTPRK-208ENST00000392449 RIF1Q5UIP0 2472 aaKnown RBP17.99■□□□□ 0.47
PTPRK-208ENST00000392449 NCANO14594 1321 aa17.99■□□□□ 0.47
PTPRK-208ENST00000392449 ECI2O75521 394 aa17.99■□□□□ 0.47
PTPRK-208ENST00000392449 SOAT2O75908 522 aa17.99■□□□□ 0.47
PTPRK-208ENST00000392449 ATXN8OSP0DMR3 200 aa17.99■□□□□ 0.47
PTPRK-208ENST00000392449 DUSP4Q13115 394 aa17.99■□□□□ 0.47
PTPRK-208ENST00000392449 TMEM132DQ14C87 1099 aa17.99■□□□□ 0.47
PTPRK-208ENST00000392449 UBXN2BQ14CS0 331 aa17.99■□□□□ 0.47
PTPRK-208ENST00000392449 KYAT1Q16773 422 aa17.99■□□□□ 0.47
PTPRK-208ENST00000392449 C9orf57Q5W0N0 161 aa17.99■□□□□ 0.47
PTPRK-208ENST00000392449 OVOS1Q6IE37 1185 aa17.99■□□□□ 0.47
PTPRK-208ENST00000392449 ZNF720Q7Z2F6 126 aa17.99■□□□□ 0.47
PTPRK-208ENST00000392449 USP37Q86T82 979 aa17.99■□□□□ 0.47
PTPRK-208ENST00000392449 ZSWIM2Q8NEG5 633 aa17.99■□□□□ 0.47
PTPRK-208ENST00000392449 BEST2Q8NFU1 509 aa17.99■□□□□ 0.47
PTPRK-208ENST00000392449 NKD2Q969F2 451 aaPredicted RBP17.99■□□□□ 0.47
PTPRK-208ENST00000392449 FAM84AQ96KN4 292 aa17.99■□□□□ 0.47
PTPRK-208ENST00000392449 SENP8Q96LD8 212 aa17.99■□□□□ 0.47
PTPRK-208ENST00000392449 USP28Q96RU2 1077 aa17.99■□□□□ 0.47
PTPRK-208ENST00000392449 FGFBP2Q9BYJ0 223 aa17.99■□□□□ 0.47
PTPRK-208ENST00000392449 MTMR6Q9Y217 621 aa17.99■□□□□ 0.47
PTPRK-208ENST00000392449 SLC27A5Q9Y2P5 690 aa17.99■□□□□ 0.47
PTPRK-208ENST00000392449 R4GN57 208 aa17.99■□□□□ 0.47
PTPRK-208ENST00000392449 CACNA1IQ9P0X4 2223 aa17.99■□□□□ 0.47
PTPRK-208ENST00000392449 PTPRZ1P23471 2315 aaPredicted RBP17.98■□□□□ 0.47
PTPRK-208ENST00000392449 KANSL1LA0AUZ9 987 aa17.98■□□□□ 0.47
PTPRK-208ENST00000392449 TULP1O00294 542 aaPredicted RBP17.98■□□□□ 0.47
PTPRK-208ENST00000392449 XPOTO43592 962 aaKnown RBP17.98■□□□□ 0.47
PTPRK-208ENST00000392449 ADSSP30520 456 aa17.98■□□□□ 0.47
PTPRK-208ENST00000392449 CASP5P51878 434 aa17.98■□□□□ 0.47
PTPRK-208ENST00000392449 WNT7BP56706 349 aa17.98■□□□□ 0.47
PTPRK-208ENST00000392449 RRAGBQ5VZM2 374 aa17.98■□□□□ 0.47
PTPRK-208ENST00000392449 CRELD2Q6UXH1 353 aaPredicted RBP17.98■□□□□ 0.47
PTPRK-208ENST00000392449 ELMOD1Q8N336 334 aa17.98■□□□□ 0.47
PTPRK-208ENST00000392449 ATAD1Q8NBU5 361 aa17.98■□□□□ 0.47
PTPRK-208ENST00000392449 OR10T2Q8NGX3 314 aa17.98■□□□□ 0.47
PTPRK-208ENST00000392449 DNAJC19Q96DA6 116 aa17.98■□□□□ 0.47
PTPRK-208ENST00000392449 ZNF512Q96ME7 567 aaPredicted RBP17.98■□□□□ 0.47
PTPRK-208ENST00000392449 DDX23Q9BUQ8 820 aaKnown RBP17.98■□□□□ 0.47
PTPRK-208ENST00000392449 DNAJC25Q9H1X3 360 aa17.98■□□□□ 0.47
PTPRK-208ENST00000392449 HEBP1Q9NRV9 189 aa17.98■□□□□ 0.47
PTPRK-208ENST00000392449 STK17AQ9UEE5 414 aa17.98■□□□□ 0.47
PTPRK-208ENST00000392449 AGO2Q9UKV8 859 aaKnown RBP17.98■□□□□ 0.47
PTPRK-208ENST00000392449 PATJQ8NI35 1801 aa17.97■□□□□ 0.47
PTPRK-208ENST00000392449 TCHHQ07283 1943 aa17.97■□□□□ 0.47
PTPRK-208ENST00000392449 PPP1R37O75864 691 aa17.97■□□□□ 0.47
PTPRK-208ENST00000392449 SCP2P22307 547 aa17.97■□□□□ 0.47
PTPRK-208ENST00000392449 VIPR2P41587 438 aa17.97■□□□□ 0.47
PTPRK-208ENST00000392449 TEAD2Q15562 447 aa17.97■□□□□ 0.47
PTPRK-208ENST00000392449 CYP4A22Q5TCH4 519 aa17.97■□□□□ 0.47
PTPRK-208ENST00000392449 IQCEQ6IPM2 695 aa17.97■□□□□ 0.47
PTPRK-208ENST00000392449 TPRG1Q6ZUI0 275 aa17.97■□□□□ 0.47
PTPRK-208ENST00000392449 GPIHBP1Q8IV16 184 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms