RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 USP17L13C9JLJ4 530 aa16.91■□□□□ 0.3
SHANK1-204ENST00000391814 USP17L11C9JVI0 530 aa16.91■□□□□ 0.3
SHANK1-204ENST00000391814 USP17L18D6R9N7 530 aa16.91■□□□□ 0.3
SHANK1-204ENST00000391814 USP17L22D6RA61 530 aa16.91■□□□□ 0.3
SHANK1-204ENST00000391814 USP17L17D6RBQ6 530 aa16.91■□□□□ 0.3
SHANK1-204ENST00000391814 USP17L19D6RCP7 530 aa16.91■□□□□ 0.3
SHANK1-204ENST00000391814 USP17L20D6RJB6 530 aa16.91■□□□□ 0.3
SHANK1-204ENST00000391814 USP17L24Q0WX57 530 aa16.91■□□□□ 0.3
SHANK1-204ENST00000391814 SPDYAQ5MJ70 313 aa16.91■□□□□ 0.3
SHANK1-204ENST00000391814 USP17L6PQ6QN14 398 aa16.91■□□□□ 0.3
SHANK1-204ENST00000391814 AGAP3Q96P47 875 aa16.91■□□□□ 0.3
SHANK1-204ENST00000391814 ORAI2Q96SN7 254 aa16.91■□□□□ 0.3
SHANK1-204ENST00000391814 ZNF212Q9UDV6 495 aa16.91■□□□□ 0.3
SHANK1-204ENST00000391814 CHORDC1Q9UHD1 332 aaPredicted RBP16.91■□□□□ 0.3
SHANK1-204ENST00000391814 TAGLN3Q9UI15 199 aa16.91■□□□□ 0.3
SHANK1-204ENST00000391814 AK9Q5TCS8 1911 aa16.91■□□□□ 0.3
SHANK1-204ENST00000391814 EIF2AK2P19525 551 aaKnown RBP16.91■□□□□ 0.3
SHANK1-204ENST00000391814 SLC9A1P19634 815 aa16.91■□□□□ 0.3
SHANK1-204ENST00000391814 PTPN4P29074 926 aa16.91■□□□□ 0.3
SHANK1-204ENST00000391814 HERVK_113P62684 666 aa16.91■□□□□ 0.3
SHANK1-204ENST00000391814 PDXDC2PQ6P474 469 aa16.91■□□□□ 0.3
SHANK1-204ENST00000391814 TRIM72Q6ZMU5 477 aa16.91■□□□□ 0.3
SHANK1-204ENST00000391814 PID1Q7Z2X4 250 aa16.91■□□□□ 0.3
SHANK1-204ENST00000391814 MCEEQ96PE7 176 aa16.91■□□□□ 0.3
SHANK1-204ENST00000391814 METTL5Q9NRN9 209 aaKnown RBP16.91■□□□□ 0.3
SHANK1-204ENST00000391814 C2CD2Q9Y426 696 aa16.91■□□□□ 0.3
SHANK1-204ENST00000391814 DUSP10Q9Y6W6 482 aa16.91■□□□□ 0.3
SHANK1-204ENST00000391814 C1orf232A0A0U1RR37 186 aa16.91■□□□□ 0.3
SHANK1-204ENST00000391814 SLC16A3O15427 465 aaKnown RBP16.91■□□□□ 0.3
SHANK1-204ENST00000391814 EFCAB14O75071 495 aa16.91■□□□□ 0.3
SHANK1-204ENST00000391814 MYO1DO94832 1006 aa16.91■□□□□ 0.3
SHANK1-204ENST00000391814 PSMA4P25789 261 aaKnown RBP16.91■□□□□ 0.3
SHANK1-204ENST00000391814 ELF3P78545 371 aaPredicted RBP16.91■□□□□ 0.3
SHANK1-204ENST00000391814 ERFEQ4G0M1 354 aa16.91■□□□□ 0.3
SHANK1-204ENST00000391814 ARHGAP17Q68EM7 881 aa16.91■□□□□ 0.3
SHANK1-204ENST00000391814 CYLDQ9NQC7 956 aa16.91■□□□□ 0.3
SHANK1-204ENST00000391814 SNRPAP09012 282 aaKnown RBP16.9■□□□□ 0.3
SHANK1-204ENST00000391814 LCP1P13796 627 aa16.9■□□□□ 0.3
SHANK1-204ENST00000391814 UCHL3P15374 230 aa16.9■□□□□ 0.3
SHANK1-204ENST00000391814 KLRC1P26715 233 aa16.9■□□□□ 0.3
SHANK1-204ENST00000391814 ADORA2BP29275 332 aa16.9■□□□□ 0.3
SHANK1-204ENST00000391814 KRR1Q13601 381 aaKnown RBP16.9■□□□□ 0.3
SHANK1-204ENST00000391814 RSBN1Q5VWQ0 802 aaPredicted RBP16.9■□□□□ 0.3
SHANK1-204ENST00000391814 EEPD1Q7L9B9 569 aa16.9■□□□□ 0.3
SHANK1-204ENST00000391814 C11orf74Q86VG3 221 aa16.9■□□□□ 0.3
SHANK1-204ENST00000391814 PHF21AQ96BD5 680 aa16.9■□□□□ 0.3
SHANK1-204ENST00000391814 KPNA4O00629 521 aaPredicted RBP16.9■□□□□ 0.3
SHANK1-204ENST00000391814 LMBRD2Q68DH5 695 aaPredicted RBP16.9■□□□□ 0.3
SHANK1-204ENST00000391814 OR6P1Q8NGX9 317 aa16.9■□□□□ 0.3
SHANK1-204ENST00000391814 WDR48Q8TAF3 677 aa16.9■□□□□ 0.3
SHANK1-204ENST00000391814 PPCSQ9HAB8 311 aa16.9■□□□□ 0.3
SHANK1-204ENST00000391814 PDZK1P1A8MUH7 402 aa16.9■□□□□ 0.3
SHANK1-204ENST00000391814 F8W8V4 182 aa16.9■□□□□ 0.3
SHANK1-204ENST00000391814 NUP107P57740 925 aa16.9■□□□□ 0.3
SHANK1-204ENST00000391814 AP3B2Q13367 1082 aa16.9■□□□□ 0.3
SHANK1-204ENST00000391814 TRIP4Q15650 581 aaPredicted RBP16.9■□□□□ 0.3
SHANK1-204ENST00000391814 MAPK11Q15759 364 aa16.9■□□□□ 0.3
SHANK1-204ENST00000391814 KIZQ2M2Z5 673 aa16.9■□□□□ 0.3
SHANK1-204ENST00000391814 ABI1Q8IZP0 508 aa16.9■□□□□ 0.3
SHANK1-204ENST00000391814 SIX5Q8N196 739 aa16.9■□□□□ 0.3
SHANK1-204ENST00000391814 MMTAG2Q9BU76 263 aaKnown RBP16.9■□□□□ 0.3
SHANK1-204ENST00000391814 BARHL2Q9NY43 387 aa16.9■□□□□ 0.3
SHANK1-204ENST00000391814 SMAPO00193 183 aa16.9■□□□□ 0.3
SHANK1-204ENST00000391814 HNRNPRO43390 633 aaKnown RBP16.9■□□□□ 0.3
SHANK1-204ENST00000391814 FAM58BPP0C7Q3 252 aa16.9■□□□□ 0.3
SHANK1-204ENST00000391814 SMAD5Q99717 465 aaKnown RBP16.9■□□□□ 0.3
SHANK1-204ENST00000391814 DCUN1D5Q9BTE7 237 aa16.9■□□□□ 0.3
SHANK1-204ENST00000391814 TFE3P19532 575 aaPredicted RBP16.9■□□□□ 0.3
SHANK1-204ENST00000391814 LAMC2Q13753 1193 aa16.9■□□□□ 0.3
SHANK1-204ENST00000391814 ANGPT1Q15389 498 aa16.9■□□□□ 0.3
SHANK1-204ENST00000391814 ISLR2Q6UXK2 745 aa16.9■□□□□ 0.3
SHANK1-204ENST00000391814 LRRC74BQ6ZQY2 392 aa16.9■□□□□ 0.3
SHANK1-204ENST00000391814 BTN2A2Q8WVV5 523 aa16.9■□□□□ 0.3
SHANK1-204ENST00000391814 CFAP99D6REC4 459 aa16.89■□□□□ 0.29
SHANK1-204ENST00000391814 NFKBIAP25963 317 aa16.89■□□□□ 0.29
SHANK1-204ENST00000391814 GRM4Q14833 912 aa16.89■□□□□ 0.29
SHANK1-204ENST00000391814 DSTYKQ6XUX3 929 aa16.89■□□□□ 0.29
SHANK1-204ENST00000391814 CPSF1Q10570 1443 aaKnown RBP16.89■□□□□ 0.29
SHANK1-204ENST00000391814 F8VZ95 297 aa16.89■□□□□ 0.29
SHANK1-204ENST00000391814 KCNQ4P56696 695 aa16.89■□□□□ 0.29
SHANK1-204ENST00000391814 C21orf59P57076 290 aa16.89■□□□□ 0.29
SHANK1-204ENST00000391814 WASHC2DQ5SRD0 308 aa16.89■□□□□ 0.29
SHANK1-204ENST00000391814 C6orf10Q5SRN2 563 aa16.89■□□□□ 0.29
SHANK1-204ENST00000391814 AIPL1Q9NZN9 384 aa16.89■□□□□ 0.29
SHANK1-204ENST00000391814 PRDM15P57071 1507 aaPredicted RBP16.89■□□□□ 0.29
SHANK1-204ENST00000391814 PPP1R3GB7ZBB8 358 aa16.89■□□□□ 0.29
SHANK1-204ENST00000391814 GJB7Q6PEY0 223 aa16.89■□□□□ 0.29
SHANK1-204ENST00000391814 NANOGNBQ7Z5D8 188 aa16.89■□□□□ 0.29
SHANK1-204ENST00000391814 CDH24Q86UP0 819 aa16.89■□□□□ 0.29
SHANK1-204ENST00000391814 GPD1LQ8N335 351 aa16.89■□□□□ 0.29
SHANK1-204ENST00000391814 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.89■□□□□ 0.29
SHANK1-204ENST00000391814 TLR2O60603 784 aa16.89■□□□□ 0.29
SHANK1-204ENST00000391814 IMPDH2P12268 514 aa16.89■□□□□ 0.29
SHANK1-204ENST00000391814 NMT1P30419 496 aaKnown RBP16.89■□□□□ 0.29
SHANK1-204ENST00000391814 SLC34A1Q06495 639 aa16.89■□□□□ 0.29
SHANK1-204ENST00000391814 RASA2Q15283 850 aa16.89■□□□□ 0.29
SHANK1-204ENST00000391814 TPCN2Q8NHX9 752 aa16.89■□□□□ 0.29
SHANK1-204ENST00000391814 EIF2AK1Q9BQI3 630 aaKnown RBP16.89■□□□□ 0.29
SHANK1-204ENST00000391814 PABPC3Q9H361 631 aaKnown RBP16.89■□□□□ 0.29
SHANK1-204ENST00000391814 CDY2AQ9Y6F7 541 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms