RNA–Protein interactions for RNA: ENST00000380741.8

SMN2-201, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-201ENST00000380741 HS6ST3Q8IZP7 471 aa18.34■□□□□ 0.53
SMN2-201ENST00000380741 KCNG4Q8TDN1 519 aa18.34■□□□□ 0.53
SMN2-201ENST00000380741 BCO2Q9BYV7 579 aa18.34■□□□□ 0.53
SMN2-201ENST00000380741 OSBPL6Q9BZF3 934 aa18.34■□□□□ 0.53
SMN2-201ENST00000380741 SEMA4AQ9H3S1 761 aa18.34■□□□□ 0.53
SMN2-201ENST00000380741 MAFFQ9ULX9 164 aa18.34■□□□□ 0.53
SMN2-201ENST00000380741 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.34■□□□□ 0.53
SMN2-201ENST00000380741 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.34■□□□□ 0.53
SMN2-201ENST00000380741 TSC2P49815 1807 aa18.34■□□□□ 0.53
SMN2-201ENST00000380741 DNAH14Q0VDD8 3507 aa18.34■□□□□ 0.53
SMN2-201ENST00000380741 COL4A2P08572 1712 aa18.33■□□□□ 0.52
SMN2-201ENST00000380741 FAM170BA6NMN3 283 aa18.33■□□□□ 0.52
SMN2-201ENST00000380741 OGTO15294 1046 aa18.33■□□□□ 0.52
SMN2-201ENST00000380741 TRAK2O60296 914 aa18.33■□□□□ 0.52
SMN2-201ENST00000380741 MICAL2O94851 1124 aa18.33■□□□□ 0.52
SMN2-201ENST00000380741 VNN2O95498 520 aa18.33■□□□□ 0.52
SMN2-201ENST00000380741 BMP15O95972 392 aa18.33■□□□□ 0.52
SMN2-201ENST00000380741 KRT18P05783 430 aaKnown RBP18.33■□□□□ 0.52
SMN2-201ENST00000380741 OR4Q2P0C623 313 aa18.33■□□□□ 0.52
SMN2-201ENST00000380741 SCP2P22307 547 aa18.33■□□□□ 0.52
SMN2-201ENST00000380741 LONP1P36776 959 aaKnown RBP18.33■□□□□ 0.52
SMN2-201ENST00000380741 KYAT1Q16773 422 aa18.33■□□□□ 0.52
SMN2-201ENST00000380741 CYP4A22Q5TCH4 519 aa18.33■□□□□ 0.52
SMN2-201ENST00000380741 SLC39A4Q6P5W5 647 aa18.33■□□□□ 0.52
SMN2-201ENST00000380741 ZC3H14Q6PJT7 736 aaKnown RBP18.33■□□□□ 0.52
SMN2-201ENST00000380741 BRAPQ7Z569 592 aa18.33■□□□□ 0.52
SMN2-201ENST00000380741 BEST2Q8NFU1 509 aa18.33■□□□□ 0.52
SMN2-201ENST00000380741 RASSF8Q8NHQ8 419 aa18.33■□□□□ 0.52
SMN2-201ENST00000380741 RAD54LQ92698 747 aa18.33■□□□□ 0.52
SMN2-201ENST00000380741 ZNF512Q96ME7 567 aaPredicted RBP18.33■□□□□ 0.52
SMN2-201ENST00000380741 ZSWIM3Q96MP5 696 aa18.33■□□□□ 0.52
SMN2-201ENST00000380741 ASB16Q96NS5 453 aa18.33■□□□□ 0.52
SMN2-201ENST00000380741 FIZ1Q96SL8 496 aa18.33■□□□□ 0.52
SMN2-201ENST00000380741 MSTO1Q9BUK6 570 aa18.33■□□□□ 0.52
SMN2-201ENST00000380741 ZHX3Q9H4I2 956 aa18.33■□□□□ 0.52
SMN2-201ENST00000380741 RPF1Q9H9Y2 349 aaKnown RBP18.33■□□□□ 0.52
SMN2-201ENST00000380741 HEBP1Q9NRV9 189 aa18.33■□□□□ 0.52
SMN2-201ENST00000380741 OTOGLQ3ZCN5 2332 aa18.33■□□□□ 0.52
SMN2-201ENST00000380741 TICRRQ7Z2Z1 1910 aa18.33■□□□□ 0.52
SMN2-201ENST00000380741 A0A0B4J269 797 aa18.32■□□□□ 0.52
SMN2-201ENST00000380741 PPEF2O14830 753 aa18.32■□□□□ 0.52
SMN2-201ENST00000380741 XPOTO43592 962 aaKnown RBP18.32■□□□□ 0.52
SMN2-201ENST00000380741 MOSPD3O75425 235 aa18.32■□□□□ 0.52
SMN2-201ENST00000380741 ADRB2P07550 413 aa18.32■□□□□ 0.52
SMN2-201ENST00000380741 TARSP26639 723 aaKnown RBP18.32■□□□□ 0.52
SMN2-201ENST00000380741 EPHA5P54756 1037 aa18.32■□□□□ 0.52
SMN2-201ENST00000380741 GRM2Q14416 872 aa18.32■□□□□ 0.52
SMN2-201ENST00000380741 SF3A1Q15459 793 aaKnown RBP18.32■□□□□ 0.52
SMN2-201ENST00000380741 DSTYKQ6XUX3 929 aa18.32■□□□□ 0.52
SMN2-201ENST00000380741 USP37Q86T82 979 aa18.32■□□□□ 0.52
SMN2-201ENST00000380741 PGLYRP2Q96PD5 576 aa18.32■□□□□ 0.52
SMN2-201ENST00000380741 CRISPLD1Q9H336 500 aa18.32■□□□□ 0.52
SMN2-201ENST00000380741 ZFP14Q9HCL3 533 aa18.32■□□□□ 0.52
SMN2-201ENST00000380741 ASAH2Q9NR71 780 aa18.32■□□□□ 0.52
SMN2-201ENST00000380741 SPATA6Q9NWH7 488 aaPredicted RBP18.32■□□□□ 0.52
SMN2-201ENST00000380741 YIPF1Q9Y548 306 aa18.32■□□□□ 0.52
SMN2-201ENST00000380741 F5P12259 2224 aa18.32■□□□□ 0.52
SMN2-201ENST00000380741 TBCAO75347 108 aaKnown RBP18.31■□□□□ 0.52
SMN2-201ENST00000380741 MYL4P12829 197 aa18.31■□□□□ 0.52
SMN2-201ENST00000380741 GJA1P17302 382 aa18.31■□□□□ 0.52
SMN2-201ENST00000380741 NMT1P30419 496 aaKnown RBP18.31■□□□□ 0.52
SMN2-201ENST00000380741 GTF2BQ00403 316 aa18.31■□□□□ 0.52
SMN2-201ENST00000380741 SPATA1Q5VX52 437 aa18.31■□□□□ 0.52
SMN2-201ENST00000380741 JADE1Q6IE81 842 aa18.31■□□□□ 0.52
SMN2-201ENST00000380741 MAP4K3Q8IVH8 894 aa18.31■□□□□ 0.52
SMN2-201ENST00000380741 LEMD2Q8NC56 503 aa18.31■□□□□ 0.52
SMN2-201ENST00000380741 LARP4BQ92615 738 aaKnown RBP18.31■□□□□ 0.52
SMN2-201ENST00000380741 DNASE1L2Q92874 299 aa18.31■□□□□ 0.52
SMN2-201ENST00000380741 SMARCD2Q92925 531 aa18.31■□□□□ 0.52
SMN2-201ENST00000380741 FAM212AQ96EL1 285 aa18.31■□□□□ 0.52
SMN2-201ENST00000380741 TSPAN18Q96SJ8 248 aa18.31■□□□□ 0.52
SMN2-201ENST00000380741 OXCT2Q9BYC2 517 aaPredicted RBP18.31■□□□□ 0.52
SMN2-201ENST00000380741 CPSF3Q9UKF6 684 aaKnown RBP18.31■□□□□ 0.52
SMN2-201ENST00000380741 SCN1AP35498 2009 aa18.31■□□□□ 0.52
SMN2-201ENST00000380741 SHISA7A6NL88 538 aa18.3■□□□□ 0.52
SMN2-201ENST00000380741 NFICP08651 508 aa18.3■□□□□ 0.52
SMN2-201ENST00000380741 MAGEA9P43362 315 aa18.3■□□□□ 0.52
SMN2-201ENST00000380741 LILRA4P59901 499 aa18.3■□□□□ 0.52
SMN2-201ENST00000380741 GPR17Q13304 367 aa18.3■□□□□ 0.52
SMN2-201ENST00000380741 TEAD2Q15562 447 aa18.3■□□□□ 0.52
SMN2-201ENST00000380741 OVOS1Q6IE37 1185 aa18.3■□□□□ 0.52
SMN2-201ENST00000380741 VITQ6UXI7 678 aa18.3■□□□□ 0.52
SMN2-201ENST00000380741 ZNF852Q6ZMS4 543 aa18.3■□□□□ 0.52
SMN2-201ENST00000380741 CLDN23Q96B33 292 aa18.3■□□□□ 0.52
SMN2-201ENST00000380741 TRMT61BQ9BVS5 477 aaKnown RBP18.3■□□□□ 0.52
SMN2-201ENST00000380741 BRD9Q9H8M2 597 aa18.3■□□□□ 0.52
SMN2-201ENST00000380741 TCHHQ07283 1943 aa18.29■□□□□ 0.52
SMN2-201ENST00000380741 VPS37CA5D8V6 355 aaPredicted RBP18.29■□□□□ 0.52
SMN2-201ENST00000380741 OR6C75A6NL08 312 aa18.29■□□□□ 0.52
SMN2-201ENST00000380741 TISP43B9A030 160 aa18.29■□□□□ 0.52
SMN2-201ENST00000380741 ANKRD63C9JTQ0 380 aa18.29■□□□□ 0.52
SMN2-201ENST00000380741 LAMTOR5O43504 91 aa18.29■□□□□ 0.52
SMN2-201ENST00000380741 TYMPP19971 482 aa18.29■□□□□ 0.52
SMN2-201ENST00000380741 VIPR2P41587 438 aa18.29■□□□□ 0.52
SMN2-201ENST00000380741 DUSP4Q13115 394 aa18.29■□□□□ 0.52
SMN2-201ENST00000380741 ZC2HC1CQ53FD0 456 aaPredicted RBP18.29■□□□□ 0.52
SMN2-201ENST00000380741 C9orf57Q5W0N0 161 aa18.29■□□□□ 0.52
SMN2-201ENST00000380741 CD302Q8IX05 232 aa18.29■□□□□ 0.52
SMN2-201ENST00000380741 SHKBP1Q8TBC3 707 aa18.29■□□□□ 0.52
SMN2-201ENST00000380741 ZSCAN18Q8TBC5 510 aaPredicted RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms