RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 LRRC19Q9H756 370 aa13.43□□□□□ -0.26
VPS16-202ENST00000380445 PARVAQ9NVD7 372 aa13.43□□□□□ -0.26
VPS16-202ENST00000380445 PRMT7Q9NVM4 692 aaPredicted RBP13.43□□□□□ -0.26
VPS16-202ENST00000380445 MTRF1LQ9UGC7 380 aaKnown RBP13.43□□□□□ -0.26
VPS16-202ENST00000380445 ABLIM1O14639 778 aa13.43□□□□□ -0.26
VPS16-202ENST00000380445 PROSCO94903 275 aa13.43□□□□□ -0.26
VPS16-202ENST00000380445 IL18RAPO95256 599 aa13.43□□□□□ -0.26
VPS16-202ENST00000380445 LSM8O95777 96 aaKnown RBP13.43□□□□□ -0.26
VPS16-202ENST00000380445 MAN1A1P33908 653 aa13.43□□□□□ -0.26
VPS16-202ENST00000380445 PTGIRP43119 386 aa13.43□□□□□ -0.26
VPS16-202ENST00000380445 ZNF132P52740 706 aa13.43□□□□□ -0.26
VPS16-202ENST00000380445 EIF3BP55884 814 aaKnown RBP13.43□□□□□ -0.26
VPS16-202ENST00000380445 ZNF568Q3ZCX4 644 aa13.43□□□□□ -0.26
VPS16-202ENST00000380445 LRRC31Q6UY01 552 aa13.43□□□□□ -0.26
VPS16-202ENST00000380445 COPS5Q92905 334 aa13.43□□□□□ -0.26
VPS16-202ENST00000380445 ZNF518BQ9C0D4 1074 aa13.43□□□□□ -0.26
VPS16-202ENST00000380445 PTPRHQ9HD43 1115 aa13.43□□□□□ -0.26
VPS16-202ENST00000380445 VTA1Q9NP79 307 aa13.43□□□□□ -0.26
VPS16-202ENST00000380445 TNFSF13BQ9Y275 285 aa13.43□□□□□ -0.26
VPS16-202ENST00000380445 PASKQ96RG2 1323 aa13.43□□□□□ -0.26
VPS16-202ENST00000380445 IQCA1LA6NCM1 817 aa13.43□□□□□ -0.26
VPS16-202ENST00000380445 MAGEB2O15479 319 aa13.43□□□□□ -0.26
VPS16-202ENST00000380445 B4GALT4O60513 344 aa13.43□□□□□ -0.26
VPS16-202ENST00000380445 PPFIA2O75334 1257 aa13.43□□□□□ -0.26
VPS16-202ENST00000380445 YBX3P16989 372 aaKnown RBP eCLIP13.43□□□□□ -0.26
VPS16-202ENST00000380445 PHKA2P46019 1235 aa13.43□□□□□ -0.26
VPS16-202ENST00000380445 EMC10Q5UCC4 262 aa13.43□□□□□ -0.26
VPS16-202ENST00000380445 PLEKHA7Q6IQ23 1121 aa13.43□□□□□ -0.26
VPS16-202ENST00000380445 UBR7Q8N806 425 aa13.43□□□□□ -0.26
VPS16-202ENST00000380445 C11orf70Q9BRQ4 267 aa13.43□□□□□ -0.26
VPS16-202ENST00000380445 TMBIM4Q9HC24 238 aa13.43□□□□□ -0.26
VPS16-202ENST00000380445 SLC45A1Q9Y2W3 748 aa13.43□□□□□ -0.26
VPS16-202ENST00000380445 PSTPIP1O43586 416 aa13.42□□□□□ -0.26
VPS16-202ENST00000380445 STRNO43815 780 aa13.42□□□□□ -0.26
VPS16-202ENST00000380445 GH1P01241 217 aa13.42□□□□□ -0.26
VPS16-202ENST00000380445 CALB1P05937 261 aa13.42□□□□□ -0.26
VPS16-202ENST00000380445 RARAP10276 462 aa13.42□□□□□ -0.26
VPS16-202ENST00000380445 MYL6P60660 151 aa13.42□□□□□ -0.26
VPS16-202ENST00000380445 TFAMQ00059 246 aaKnown RBP13.42□□□□□ -0.26
VPS16-202ENST00000380445 EAPPQ56P03 285 aaPredicted RBP13.42□□□□□ -0.26
VPS16-202ENST00000380445 PASD1Q8IV76 773 aa13.42□□□□□ -0.26
VPS16-202ENST00000380445 RHOT1Q8IXI2 618 aa13.42□□□□□ -0.26
VPS16-202ENST00000380445 THNSL1Q8IYQ7 743 aa13.42□□□□□ -0.26
VPS16-202ENST00000380445 FAXDC2Q96IV6 333 aa13.42□□□□□ -0.26
VPS16-202ENST00000380445 CXorf56Q9H5V9 222 aa13.42□□□□□ -0.26
VPS16-202ENST00000380445 PDGFCQ9NRA1 345 aa13.42□□□□□ -0.26
VPS16-202ENST00000380445 HOMER3Q9NSC5 361 aa13.42□□□□□ -0.26
VPS16-202ENST00000380445 ZDHHC18Q9NUE0 388 aa13.42□□□□□ -0.26
VPS16-202ENST00000380445 UMODL1Q5DID0 1318 aa13.42□□□□□ -0.26
VPS16-202ENST00000380445 H0YGN5 161 aa13.42□□□□□ -0.26
VPS16-202ENST00000380445 HOXC6P09630 235 aa13.42□□□□□ -0.26
VPS16-202ENST00000380445 TNFAIP2Q03169 654 aa13.42□□□□□ -0.26
VPS16-202ENST00000380445 MAMLD1Q13495 774 aa13.42□□□□□ -0.26
VPS16-202ENST00000380445 UAP1Q16222 522 aaPredicted RBP13.42□□□□□ -0.26
VPS16-202ENST00000380445 SGO2Q562F6 1265 aa13.42□□□□□ -0.26
VPS16-202ENST00000380445 KDM7AQ6ZMT4 941 aa13.42□□□□□ -0.26
VPS16-202ENST00000380445 PNMA8AQ86V59 439 aaPredicted RBP13.42□□□□□ -0.26
VPS16-202ENST00000380445 ARFGAP2Q8N6H7 521 aa13.42□□□□□ -0.26
VPS16-202ENST00000380445 TMEM35BQ8NCS4 154 aa13.42□□□□□ -0.26
VPS16-202ENST00000380445 SLCO2A1Q92959 643 aa13.42□□□□□ -0.26
VPS16-202ENST00000380445 RPF1Q9H9Y2 349 aaKnown RBP13.42□□□□□ -0.26
VPS16-202ENST00000380445 NFS1Q9Y697 457 aa13.42□□□□□ -0.26
VPS16-202ENST00000380445 UTRNP46939 3433 aa13.41□□□□□ -0.26
VPS16-202ENST00000380445 PPFIA4O75335 1185 aa13.41□□□□□ -0.26
VPS16-202ENST00000380445 ECEL1O95672 775 aa13.41□□□□□ -0.26
VPS16-202ENST00000380445 CETPP11597 493 aa13.41□□□□□ -0.26
VPS16-202ENST00000380445 TMOD1P28289 359 aa13.41□□□□□ -0.26
VPS16-202ENST00000380445 GJA5P36382 358 aa13.41□□□□□ -0.26
VPS16-202ENST00000380445 FLT3P36888 993 aa13.41□□□□□ -0.26
VPS16-202ENST00000380445 CETN2P41208 172 aa13.41□□□□□ -0.26
VPS16-202ENST00000380445 IRAK1P51617 712 aa13.41□□□□□ -0.26
VPS16-202ENST00000380445 CLCN3P51790 818 aa13.41□□□□□ -0.26
VPS16-202ENST00000380445 PLTPP55058 493 aa13.41□□□□□ -0.26
VPS16-202ENST00000380445 MBTD1Q05BQ5 628 aa13.41□□□□□ -0.26
VPS16-202ENST00000380445 ARHGAP1Q07960 439 aa13.41□□□□□ -0.26
VPS16-202ENST00000380445 SIX1Q15475 284 aaPredicted RBP13.41□□□□□ -0.26
VPS16-202ENST00000380445 ZNF699Q32M78 642 aa13.41□□□□□ -0.26
VPS16-202ENST00000380445 KCTD16Q68DU8 428 aa13.41□□□□□ -0.26
VPS16-202ENST00000380445 TTC27Q6P3X3 843 aa13.41□□□□□ -0.26
VPS16-202ENST00000380445 GRK7Q8WTQ7 553 aa13.41□□□□□ -0.26
VPS16-202ENST00000380445 TRAPPC12Q8WVT3 735 aa13.41□□□□□ -0.26
VPS16-202ENST00000380445 PPM1EQ8WY54 764 aa13.41□□□□□ -0.26
VPS16-202ENST00000380445 CISHQ9NSE2 258 aa13.41□□□□□ -0.26
VPS16-202ENST00000380445 DONSONQ9NYP3 566 aa13.41□□□□□ -0.26
VPS16-202ENST00000380445 IP6K2Q9UHH9 426 aa13.41□□□□□ -0.26
VPS16-202ENST00000380445 SNX24Q9Y343 169 aa13.41□□□□□ -0.26
VPS16-202ENST00000380445 IVNS1ABPQ9Y6Y0 642 aa13.41□□□□□ -0.26
VPS16-202ENST00000380445 GLTPD2A6NH11 291 aa13.41□□□□□ -0.26
VPS16-202ENST00000380445 TLR3O15455 904 aaKnown RBP13.41□□□□□ -0.26
VPS16-202ENST00000380445 C22orf31O95567 290 aa13.41□□□□□ -0.26
VPS16-202ENST00000380445 CYP2C8P10632 490 aa13.41□□□□□ -0.26
VPS16-202ENST00000380445 NR1D1P20393 614 aa13.41□□□□□ -0.26
VPS16-202ENST00000380445 MMP8P22894 467 aa13.41□□□□□ -0.26
VPS16-202ENST00000380445 KYAT1Q16773 422 aa13.41□□□□□ -0.26
VPS16-202ENST00000380445 FAM187BQ17R55 369 aa13.41□□□□□ -0.26
VPS16-202ENST00000380445 ZNF792Q3KQV3 632 aa13.41□□□□□ -0.26
VPS16-202ENST00000380445 MMS22LQ6ZRQ5 1243 aa13.41□□□□□ -0.26
VPS16-202ENST00000380445 SYDE1Q6ZW31 735 aaPredicted RBP13.41□□□□□ -0.26
VPS16-202ENST00000380445 ZNF467Q7Z7K2 595 aaPredicted RBP13.41□□□□□ -0.26
VPS16-202ENST00000380445 CPNE8Q86YQ8 564 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms