RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 C12orf50Q8NA57 414 aaPredicted RBP24.63■■□□□ 1.53
VPS16-201ENST00000380443 TRAPPC12Q8WVT3 735 aa24.63■■□□□ 1.53
VPS16-201ENST00000380443 PARK7Q99497 189 aaKnown RBP24.63■■□□□ 1.53
VPS16-201ENST00000380443 KATNBL1Q9H079 304 aa24.63■■□□□ 1.53
VPS16-201ENST00000380443 MROH7Q68CQ1 1323 aa24.63■■□□□ 1.53
VPS16-201ENST00000380443 A6NNZ2 444 aa24.62■■□□□ 1.53
VPS16-201ENST00000380443 PYGMP11217 842 aa24.62■■□□□ 1.53
VPS16-201ENST00000380443 MAN1A1P33908 653 aa24.62■■□□□ 1.53
VPS16-201ENST00000380443 FNTAP49354 379 aa24.62■■□□□ 1.53
VPS16-201ENST00000380443 IRF5Q13568 498 aa24.62■■□□□ 1.53
VPS16-201ENST00000380443 TUBB8Q3ZCM7 444 aa24.62■■□□□ 1.53
VPS16-201ENST00000380443 DUPD1Q68J44 220 aa24.62■■□□□ 1.53
VPS16-201ENST00000380443 FAM76AQ8TAV0 307 aa24.62■■□□□ 1.53
VPS16-201ENST00000380443 ZNF606Q8WXB4 792 aa24.62■■□□□ 1.53
VPS16-201ENST00000380443 BRI3BPQ8WY22 251 aa24.62■■□□□ 1.53
VPS16-201ENST00000380443 ZIM3Q96PE6 472 aa24.62■■□□□ 1.53
VPS16-201ENST00000380443 PARP2Q9UGN5 583 aa24.62■■□□□ 1.53
VPS16-201ENST00000380443 GOLGA6CA6NDK9 693 aa24.61■■□□□ 1.53
VPS16-201ENST00000380443 ZEB2O60315 1214 aa24.61■■□□□ 1.53
VPS16-201ENST00000380443 AOC2O75106 756 aa24.61■■□□□ 1.53
VPS16-201ENST00000380443 PROSCO94903 275 aa24.61■■□□□ 1.53
VPS16-201ENST00000380443 CALB1P05937 261 aa24.61■■□□□ 1.53
VPS16-201ENST00000380443 GOLGA6DP0CG33 693 aa24.61■■□□□ 1.53
VPS16-201ENST00000380443 HOXD8P13378 290 aaPredicted RBP24.61■■□□□ 1.53
VPS16-201ENST00000380443 MARCKSL1P49006 195 aa24.61■■□□□ 1.53
VPS16-201ENST00000380443 GUCY2FP51841 1108 aa24.61■■□□□ 1.53
VPS16-201ENST00000380443 MYL6P60660 151 aa24.61■■□□□ 1.53
VPS16-201ENST00000380443 GRB14Q14449 540 aa24.61■■□□□ 1.53
VPS16-201ENST00000380443 SPRYD7Q5W111 196 aa24.61■■□□□ 1.53
VPS16-201ENST00000380443 REM2Q8IYK8 340 aaPredicted RBP24.61■■□□□ 1.53
VPS16-201ENST00000380443 PRELID2Q8N945 189 aa24.61■■□□□ 1.53
VPS16-201ENST00000380443 GADD45GIP1Q8TAE8 222 aaPredicted RBP24.61■■□□□ 1.53
VPS16-201ENST00000380443 CDT1Q9H211 546 aa24.61■■□□□ 1.53
VPS16-201ENST00000380443 PARVAQ9NVD7 372 aa24.61■■□□□ 1.53
VPS16-201ENST00000380443 SLC5A4Q9NY91 659 aa24.61■■□□□ 1.53
VPS16-201ENST00000380443 GOLGA6AQ9NYA3 693 aa24.61■■□□□ 1.53
VPS16-201ENST00000380443 NR2E1Q9Y466 385 aa24.61■■□□□ 1.53
VPS16-201ENST00000380443 ZSWIM8A7E2V4 1837 aa24.61■■□□□ 1.53
VPS16-201ENST00000380443 FSCN2O14926 492 aa24.61■■□□□ 1.53
VPS16-201ENST00000380443 DAPK3O43293 454 aa24.61■■□□□ 1.53
VPS16-201ENST00000380443 TFAMQ00059 246 aaKnown RBP24.61■■□□□ 1.53
VPS16-201ENST00000380443 ZNF699Q32M78 642 aa24.61■■□□□ 1.53
VPS16-201ENST00000380443 MAGOHBQ96A72 148 aaKnown RBP24.61■■□□□ 1.53
VPS16-201ENST00000380443 FAM212AQ96EL1 285 aa24.61■■□□□ 1.53
VPS16-201ENST00000380443 BTBD6Q96KE9 485 aa24.61■■□□□ 1.53
VPS16-201ENST00000380443 FAM124BQ9H5Z6 455 aaPredicted RBP24.61■■□□□ 1.53
VPS16-201ENST00000380443 ASB7Q9H672 318 aa24.61■■□□□ 1.53
VPS16-201ENST00000380443 IFT122Q9HBG6 1241 aa24.61■■□□□ 1.53
VPS16-201ENST00000380443 CHORDC1Q9UHD1 332 aaPredicted RBP24.61■■□□□ 1.53
VPS16-201ENST00000380443 UMODL1Q5DID0 1318 aa24.61■■□□□ 1.53
VPS16-201ENST00000380443 PSTPIP1O43586 416 aa24.6■■□□□ 1.53
VPS16-201ENST00000380443 GYS2P54840 703 aa24.6■■□□□ 1.53
VPS16-201ENST00000380443 TRADDQ15628 312 aa24.6■■□□□ 1.53
VPS16-201ENST00000380443 TMEM63BQ5T3F8 832 aa24.6■■□□□ 1.53
VPS16-201ENST00000380443 IQSEC1Q6DN90 963 aa24.6■■□□□ 1.53
VPS16-201ENST00000380443 DPP9Q86TI2 863 aa24.6■■□□□ 1.53
VPS16-201ENST00000380443 THNSL1Q8IYQ7 743 aa24.6■■□□□ 1.53
VPS16-201ENST00000380443 AFG1LQ8WV93 481 aa24.6■■□□□ 1.53
VPS16-201ENST00000380443 ABHD16BQ9H3Z7 469 aa24.6■■□□□ 1.53
VPS16-201ENST00000380443 PLEKHA4Q9H4M7 779 aa24.6■■□□□ 1.53
VPS16-201ENST00000380443 ERVK-5Q9HDB9 667 aa24.6■■□□□ 1.53
VPS16-201ENST00000380443 CISHQ9NSE2 258 aa24.6■■□□□ 1.53
VPS16-201ENST00000380443 PCDHGC3Q9UN70 934 aa24.6■■□□□ 1.53
VPS16-201ENST00000380443 THSD7BQ9C0I4 1608 aa24.6■■□□□ 1.53
VPS16-201ENST00000380443 SNAI1O95863 264 aaPredicted RBP24.59■■□□□ 1.53
VPS16-201ENST00000380443 PTGIRP43119 386 aa24.59■■□□□ 1.53
VPS16-201ENST00000380443 TAP1Q03518 808 aa24.59■■□□□ 1.53
VPS16-201ENST00000380443 FAM110CQ1W6H9 321 aa24.59■■□□□ 1.53
VPS16-201ENST00000380443 DUSP28Q4G0W2 176 aa24.59■■□□□ 1.53
VPS16-201ENST00000380443 GPR142Q7Z601 462 aa24.59■■□□□ 1.53
VPS16-201ENST00000380443 JAMLQ86YT9 394 aa24.59■■□□□ 1.53
VPS16-201ENST00000380443 TMEM35BQ8NCS4 154 aa24.59■■□□□ 1.53
VPS16-201ENST00000380443 C16orf70Q9BSU1 422 aa24.59■■□□□ 1.53
VPS16-201ENST00000380443 LRRC19Q9H756 370 aa24.59■■□□□ 1.53
VPS16-201ENST00000380443 MMP8P22894 467 aa24.58■■□□□ 1.53
VPS16-201ENST00000380443 ATICP31939 592 aa24.58■■□□□ 1.53
VPS16-201ENST00000380443 CDH5P33151 784 aaPredicted RBP24.58■■□□□ 1.53
VPS16-201ENST00000380443 LMAN1P49257 510 aa24.58■■□□□ 1.53
VPS16-201ENST00000380443 CDC42EP1Q00587 391 aa24.58■■□□□ 1.53
VPS16-201ENST00000380443 MAMLD1Q13495 774 aa24.58■■□□□ 1.53
VPS16-201ENST00000380443 EEF1DP3Q658K8 133 aa24.58■■□□□ 1.53
VPS16-201ENST00000380443 PLEKHH3Q7Z736 793 aa24.58■■□□□ 1.53
VPS16-201ENST00000380443 RIN2Q8WYP3 895 aaPredicted RBP24.58■■□□□ 1.53
VPS16-201ENST00000380443 SLCO2A1Q92959 643 aa24.58■■□□□ 1.53
VPS16-201ENST00000380443 CELF4Q9BZC1 486 aaKnown RBP24.58■■□□□ 1.53
VPS16-201ENST00000380443 XYLT2Q9H1B5 865 aa24.58■■□□□ 1.53
VPS16-201ENST00000380443 HOMER3Q9NSC5 361 aa24.58■■□□□ 1.53
VPS16-201ENST00000380443 CEP83Q9Y592 693 aa24.58■■□□□ 1.53
VPS16-201ENST00000380443 CALCAP01258 141 aa24.58■■□□□ 1.53
VPS16-201ENST00000380443 EIF4BP23588 611 aaKnown RBP24.58■■□□□ 1.53
VPS16-201ENST00000380443 MKRN3Q13064 507 aaKnown RBP24.58■■□□□ 1.53
VPS16-201ENST00000380443 MTHFD1LQ6UB35 978 aa24.58■■□□□ 1.53
VPS16-201ENST00000380443 NT5DC4Q86YG4 428 aa24.58■■□□□ 1.53
VPS16-201ENST00000380443 PIK3R5Q8WYR1 880 aa24.58■■□□□ 1.53
VPS16-201ENST00000380443 C11orf70Q9BRQ4 267 aa24.58■■□□□ 1.53
VPS16-201ENST00000380443 MINDY3Q9H8M7 445 aa24.58■■□□□ 1.53
VPS16-201ENST00000380443 IP6K2Q9UHH9 426 aa24.58■■□□□ 1.53
VPS16-201ENST00000380443 FEZ2Q9UHY8 353 aaPredicted RBP24.58■■□□□ 1.53
VPS16-201ENST00000380443 PCNTO95613 3336 aa24.57■■□□□ 1.52
VPS16-201ENST00000380443 SLC15A5A6NIM6 579 aa24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms