RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 AAASQ9NRG9 546 aa13.2□□□□□ -0.3
PRPF40B-202ENST00000380281 RHBDL2Q9NX52 303 aa13.2□□□□□ -0.3
PRPF40B-202ENST00000380281 RAB20Q9NX57 234 aa13.2□□□□□ -0.3
PRPF40B-202ENST00000380281 CYP39A1Q9NYL5 469 aa13.2□□□□□ -0.3
PRPF40B-202ENST00000380281 NOCTQ9UK39 431 aaKnown RBP13.2□□□□□ -0.3
PRPF40B-202ENST00000380281 BLOC1S6Q9UL45 172 aa13.2□□□□□ -0.3
PRPF40B-202ENST00000380281 AGTP01019 485 aa13.19□□□□□ -0.3
PRPF40B-202ENST00000380281 PLS3P13797 630 aa13.19□□□□□ -0.3
PRPF40B-202ENST00000380281 ETS2P15036 469 aa13.19□□□□□ -0.3
PRPF40B-202ENST00000380281 GSTT1P30711 240 aa13.19□□□□□ -0.3
PRPF40B-202ENST00000380281 PRKG1Q13976 671 aa13.19□□□□□ -0.3
PRPF40B-202ENST00000380281 FASTKD3Q14CZ7 662 aaKnown RBP13.19□□□□□ -0.3
PRPF40B-202ENST00000380281 SEC14L1Q92503 715 aa13.19□□□□□ -0.3
PRPF40B-202ENST00000380281 MASTLQ96GX5 879 aa13.19□□□□□ -0.3
PRPF40B-202ENST00000380281 WNT8AQ9H1J5 351 aa13.19□□□□□ -0.3
PRPF40B-202ENST00000380281 SAYSD1Q9NPB0 183 aa13.19□□□□□ -0.3
PRPF40B-202ENST00000380281 ZNF277Q9NRM2 450 aaPredicted RBP13.19□□□□□ -0.3
PRPF40B-202ENST00000380281 SCOCQ9UIL1 159 aa13.19□□□□□ -0.3
PRPF40B-202ENST00000380281 PCDHGA4Q9Y5G9 962 aa13.19□□□□□ -0.3
PRPF40B-202ENST00000380281 SBF2Q86WG5 1849 aa13.19□□□□□ -0.3
PRPF40B-202ENST00000380281 H0YIN7 160 aa13.19□□□□□ -0.3
PRPF40B-202ENST00000380281 NPTX2P47972 431 aa13.19□□□□□ -0.3
PRPF40B-202ENST00000380281 TAS2R40P59535 323 aa13.19□□□□□ -0.3
PRPF40B-202ENST00000380281 RPS6P62753 249 aaKnown RBP13.19□□□□□ -0.3
PRPF40B-202ENST00000380281 NOP14P78316 857 aaKnown RBP13.19□□□□□ -0.3
PRPF40B-202ENST00000380281 SMAD1Q15797 465 aaKnown RBP13.19□□□□□ -0.3
PRPF40B-202ENST00000380281 MTERF2Q49AM1 385 aa13.19□□□□□ -0.3
PRPF40B-202ENST00000380281 KRT39Q6A163 491 aa13.19□□□□□ -0.3
PRPF40B-202ENST00000380281 ZC3H18Q86VM9 953 aaKnown RBP13.19□□□□□ -0.3
PRPF40B-202ENST00000380281 VSIG1Q86XK7 387 aa13.19□□□□□ -0.3
PRPF40B-202ENST00000380281 OGFOD1Q8N543 542 aa13.19□□□□□ -0.3
PRPF40B-202ENST00000380281 GBP7Q8N8V2 638 aaPredicted RBP13.19□□□□□ -0.3
PRPF40B-202ENST00000380281 EIF1ADQ8N9N8 165 aaKnown RBP13.19□□□□□ -0.3
PRPF40B-202ENST00000380281 FAM13CQ8NE31 585 aa13.19□□□□□ -0.3
PRPF40B-202ENST00000380281 GMCL1P1Q8NEA9 526 aa13.19□□□□□ -0.3
PRPF40B-202ENST00000380281 PGM2Q96G03 612 aa13.19□□□□□ -0.3
PRPF40B-202ENST00000380281 NAALADL1Q9UQQ1 740 aa13.19□□□□□ -0.3
PRPF40B-202ENST00000380281 ARL2BPQ9Y2Y0 163 aa13.19□□□□□ -0.3
PRPF40B-202ENST00000380281 RREB1Q92766 1687 aa13.18□□□□□ -0.3
PRPF40B-202ENST00000380281 VIL1P09327 827 aaKnown RBP13.18□□□□□ -0.3
PRPF40B-202ENST00000380281 NUDT17P0C025 328 aa13.18□□□□□ -0.3
PRPF40B-202ENST00000380281 ADRA2BP18089 450 aa13.18□□□□□ -0.3
PRPF40B-202ENST00000380281 NSFP46459 744 aaKnown RBP13.18□□□□□ -0.3
PRPF40B-202ENST00000380281 MRPS9P82933 396 aaKnown RBP13.18□□□□□ -0.3
PRPF40B-202ENST00000380281 P3H1Q32P28 736 aa13.18□□□□□ -0.3
PRPF40B-202ENST00000380281 TKFCQ3LXA3 575 aa13.18□□□□□ -0.3
PRPF40B-202ENST00000380281 IZUMO3Q5VZ72 239 aa13.18□□□□□ -0.3
PRPF40B-202ENST00000380281 CDR2LQ86X02 465 aaPredicted RBP13.18□□□□□ -0.3
PRPF40B-202ENST00000380281 FBXL13Q8NEE6 735 aa13.18□□□□□ -0.3
PRPF40B-202ENST00000380281 FNBP1Q96RU3 617 aa13.18□□□□□ -0.3
PRPF40B-202ENST00000380281 RMDN3Q96TC7 470 aa13.18□□□□□ -0.3
PRPF40B-202ENST00000380281 MOV10L1Q9BXT6 1211 aaKnown RBP13.18□□□□□ -0.3
PRPF40B-202ENST00000380281 FHDC1Q9C0D6 1143 aaPredicted RBP13.18□□□□□ -0.3
PRPF40B-202ENST00000380281 TMEM206Q9H813 350 aa13.18□□□□□ -0.3
PRPF40B-202ENST00000380281 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.18□□□□□ -0.3
PRPF40B-202ENST00000380281 NKIRAS1Q9NYS0 192 aa13.18□□□□□ -0.3
PRPF40B-202ENST00000380281 GABBR1Q9UBS5 961 aa13.18□□□□□ -0.3
PRPF40B-202ENST00000380281 SEL1LQ9UBV2 794 aa13.18□□□□□ -0.3
PRPF40B-202ENST00000380281 LNPEPQ9UIQ6 1025 aa13.18□□□□□ -0.3
PRPF40B-202ENST00000380281 SUGT1Q9Y2Z0 365 aa13.18□□□□□ -0.3
PRPF40B-202ENST00000380281 YDJCA8MPS7 323 aa13.18□□□□□ -0.3
PRPF40B-202ENST00000380281 UNC5CO95185 931 aa13.18□□□□□ -0.3
PRPF40B-202ENST00000380281 APBA3O96018 575 aa13.18□□□□□ -0.3
PRPF40B-202ENST00000380281 KCNA3P22001 575 aa13.18□□□□□ -0.3
PRPF40B-202ENST00000380281 EPHB2P29323 1055 aa13.18□□□□□ -0.3
PRPF40B-202ENST00000380281 NRLP54845 237 aa13.18□□□□□ -0.3
PRPF40B-202ENST00000380281 WNT7BP56706 349 aa13.18□□□□□ -0.3
PRPF40B-202ENST00000380281 RASIP1Q5U651 963 aa13.18□□□□□ -0.3
PRPF40B-202ENST00000380281 SWSAP1Q6NVH7 229 aa13.18□□□□□ -0.3
PRPF40B-202ENST00000380281 SCARA5Q6ZMJ2 495 aa13.18□□□□□ -0.3
PRPF40B-202ENST00000380281 ANKS1BQ7Z6G8 1248 aa13.18□□□□□ -0.3
PRPF40B-202ENST00000380281 TMEM130Q8N3G9 435 aa13.18□□□□□ -0.3
PRPF40B-202ENST00000380281 ASAP3Q8TDY4 903 aa13.18□□□□□ -0.3
PRPF40B-202ENST00000380281 TMEM143Q96AN5 459 aa13.18□□□□□ -0.3
PRPF40B-202ENST00000380281 IDI2Q9BXS1 227 aa13.18□□□□□ -0.3
PRPF40B-202ENST00000380281 NMRK1Q9NWW6 199 aa13.18□□□□□ -0.3
PRPF40B-202ENST00000380281 PPP1R1BQ9UD71 204 aaPredicted RBP13.18□□□□□ -0.3
PRPF40B-202ENST00000380281 SEPT9Q9UHD8 586 aaPredicted RBP13.18□□□□□ -0.3
PRPF40B-202ENST00000380281 DCTN4Q9UJW0 460 aa13.18□□□□□ -0.3
PRPF40B-202ENST00000380281 PCDHA3Q9Y5H8 950 aa13.18□□□□□ -0.3
PRPF40B-202ENST00000380281 USH1CQ9Y6N9 552 aa13.18□□□□□ -0.3
PRPF40B-202ENST00000380281 GAS8O95995 478 aa13.18□□□□□ -0.3
PRPF40B-202ENST00000380281 CTNNA2P26232 953 aa13.18□□□□□ -0.3
PRPF40B-202ENST00000380281 MAGEA8P43361 318 aa13.18□□□□□ -0.3
PRPF40B-202ENST00000380281 CACNA2D1P54289 1103 aa13.18□□□□□ -0.3
PRPF40B-202ENST00000380281 OSTNP61366 133 aa13.18□□□□□ -0.3
PRPF40B-202ENST00000380281 ORC1Q13415 861 aa13.18□□□□□ -0.3
PRPF40B-202ENST00000380281 SMTNL2Q2TAL5 461 aa13.18□□□□□ -0.3
PRPF40B-202ENST00000380281 VSTM1Q6UX27 236 aa13.18□□□□□ -0.3
PRPF40B-202ENST00000380281 RFX8Q6ZV50 586 aa13.18□□□□□ -0.3
PRPF40B-202ENST00000380281 FAM71AQ8IYT1 594 aa13.18□□□□□ -0.3
PRPF40B-202ENST00000380281 RAB3IPQ96QF0 476 aaPredicted RBP13.18□□□□□ -0.3
PRPF40B-202ENST00000380281 TCHPQ9BT92 498 aa13.18□□□□□ -0.3
PRPF40B-202ENST00000380281 PITPNM3Q9BZ71 974 aa13.18□□□□□ -0.3
PRPF40B-202ENST00000380281 QTRT2Q9H974 415 aaKnown RBP13.18□□□□□ -0.3
PRPF40B-202ENST00000380281 EHMT1Q9H9B1 1298 aa13.18□□□□□ -0.3
PRPF40B-202ENST00000380281 PCDHB4Q9Y5E5 795 aa13.18□□□□□ -0.3
PRPF40B-202ENST00000380281 ZCCHC18P0CG32 403 aa13.17□□□□□ -0.3
PRPF40B-202ENST00000380281 SETSIPP0DME0 302 aa13.17□□□□□ -0.3
PRPF40B-202ENST00000380281 OVGP1Q12889 678 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms