RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 IKZF4Q9H2S9 585 aa8.3□□□□□ -1.08
CDKL5-202ENST00000379996 RNF19AQ9NV58 838 aa8.3□□□□□ -1.08
CDKL5-202ENST00000379996 SUCLA2Q9P2R7 463 aaPredicted RBP8.3□□□□□ -1.08
CDKL5-202ENST00000379996 PACSIN2Q9UNF0 486 aaPredicted RBP8.3□□□□□ -1.08
CDKL5-202ENST00000379996 PDCD11Q14690 1871 aaKnown RBP8.3□□□□□ -1.08
CDKL5-202ENST00000379996 ARVCFO00192 962 aa8.3□□□□□ -1.08
CDKL5-202ENST00000379996 DDX3YO15523 660 aaKnown RBP8.3□□□□□ -1.08
CDKL5-202ENST00000379996 AFPP02771 609 aaKnown RBP8.3□□□□□ -1.08
CDKL5-202ENST00000379996 PROZP22891 400 aa8.3□□□□□ -1.08
CDKL5-202ENST00000379996 MARK3P27448 753 aa8.3□□□□□ -1.08
CDKL5-202ENST00000379996 GPC3P51654 580 aa8.3□□□□□ -1.08
CDKL5-202ENST00000379996 ITGA7Q13683 1181 aa8.3□□□□□ -1.08
CDKL5-202ENST00000379996 TSNAXIP1Q2TAA8 658 aa8.3□□□□□ -1.08
CDKL5-202ENST00000379996 GBP6Q6ZN66 633 aa8.3□□□□□ -1.08
CDKL5-202ENST00000379996 TAS1R3Q7RTX0 852 aa8.3□□□□□ -1.08
CDKL5-202ENST00000379996 NT5DC3Q86UY8 548 aa8.3□□□□□ -1.08
CDKL5-202ENST00000379996 CAGE1Q8TC20 777 aa8.3□□□□□ -1.08
CDKL5-202ENST00000379996 ADAM32Q8TC27 787 aa8.3□□□□□ -1.08
CDKL5-202ENST00000379996 GLT1D1Q96MS3 346 aa8.3□□□□□ -1.08
CDKL5-202ENST00000379996 CRACR2AQ9BSW2 395 aa8.3□□□□□ -1.08
CDKL5-202ENST00000379996 ISCUQ9H1K1 167 aa8.3□□□□□ -1.08
CDKL5-202ENST00000379996 IFT122Q9HBG6 1241 aa8.3□□□□□ -1.08
CDKL5-202ENST00000379996 TBX20Q9UMR3 447 aa8.3□□□□□ -1.08
CDKL5-202ENST00000379996 LTBP2Q14767 1821 aa8.3□□□□□ -1.08
CDKL5-202ENST00000379996 ADGRA3Q8IWK6 1321 aa8.3□□□□□ -1.08
CDKL5-202ENST00000379996 ANKRD33BA6NCL7 494 aa8.29□□□□□ -1.08
CDKL5-202ENST00000379996 SRRM3A6NNA2 597 aaPredicted RBP8.29□□□□□ -1.08
CDKL5-202ENST00000379996 NR3C1P04150 777 aa8.29□□□□□ -1.08
CDKL5-202ENST00000379996 HADHBP55084 474 aaKnown RBP8.29□□□□□ -1.08
CDKL5-202ENST00000379996 ASIC2Q16515 512 aa8.29□□□□□ -1.08
CDKL5-202ENST00000379996 CCDC40Q4G0X9 1142 aa8.29□□□□□ -1.08
CDKL5-202ENST00000379996 TBCELQ5QJ74 424 aa8.29□□□□□ -1.08
CDKL5-202ENST00000379996 C8orf74Q6P047 294 aa8.29□□□□□ -1.08
CDKL5-202ENST00000379996 CXCL17Q6UXB2 119 aa8.29□□□□□ -1.08
CDKL5-202ENST00000379996 HAUS6Q7Z4H7 955 aa8.29□□□□□ -1.08
CDKL5-202ENST00000379996 PRPF31Q8WWY3 499 aaKnown RBP8.29□□□□□ -1.08
CDKL5-202ENST00000379996 PSMB7Q99436 277 aa8.29□□□□□ -1.08
CDKL5-202ENST00000379996 EPB41L4BQ9H329 900 aa8.29□□□□□ -1.08
CDKL5-202ENST00000379996 KMT5AQ9NQR1 393 aa8.29□□□□□ -1.08
CDKL5-202ENST00000379996 ADAMTS1Q9UHI8 967 aa8.29□□□□□ -1.08
CDKL5-202ENST00000379996 BZW2Q9Y6E2 419 aaKnown RBP8.29□□□□□ -1.08
CDKL5-202ENST00000379996 CNTNAP2Q9UHC6 1331 aa8.29□□□□□ -1.08
CDKL5-202ENST00000379996 F8VZ95 297 aa8.29□□□□□ -1.08
CDKL5-202ENST00000379996 CALUO43852 315 aaPredicted RBP8.29□□□□□ -1.08
CDKL5-202ENST00000379996 GFPT2O94808 682 aa8.29□□□□□ -1.08
CDKL5-202ENST00000379996 GARTP22102 1010 aa8.29□□□□□ -1.08
CDKL5-202ENST00000379996 AXLP30530 894 aa8.29□□□□□ -1.08
CDKL5-202ENST00000379996 TNNT3P45378 269 aaPredicted RBP8.29□□□□□ -1.08
CDKL5-202ENST00000379996 PHKA2P46019 1235 aa8.29□□□□□ -1.08
CDKL5-202ENST00000379996 MBTD1Q05BQ5 628 aa8.29□□□□□ -1.08
CDKL5-202ENST00000379996 NR1H3Q13133 447 aa8.29□□□□□ -1.08
CDKL5-202ENST00000379996 GDF6Q6KF10 455 aaPredicted RBP8.29□□□□□ -1.08
CDKL5-202ENST00000379996 SCUBE3Q8IX30 993 aa8.29□□□□□ -1.08
CDKL5-202ENST00000379996 TSPYL1Q9H0U9 437 aa8.29□□□□□ -1.08
CDKL5-202ENST00000379996 DEF6Q9H4E7 631 aa8.29□□□□□ -1.08
CDKL5-202ENST00000379996 GPRC5CQ9NQ84 441 aa8.29□□□□□ -1.08
CDKL5-202ENST00000379996 SETD4Q9NVD3 440 aa8.29□□□□□ -1.08
CDKL5-202ENST00000379996 GOLGA6CA6NDK9 693 aa8.29□□□□□ -1.08
CDKL5-202ENST00000379996 K7ENM7 598 aa8.29□□□□□ -1.08
CDKL5-202ENST00000379996 HEXIM1O94992 359 aaKnown RBP8.29□□□□□ -1.08
CDKL5-202ENST00000379996 GOLGA6DP0CG33 693 aa8.29□□□□□ -1.08
CDKL5-202ENST00000379996 CRYBB1P53674 252 aaPredicted RBP8.29□□□□□ -1.08
CDKL5-202ENST00000379996 KLHL30Q0D2K2 578 aa8.29□□□□□ -1.08
CDKL5-202ENST00000379996 MTFR1Q15390 333 aa8.29□□□□□ -1.08
CDKL5-202ENST00000379996 HSP90B2PQ58FF3 399 aa8.29□□□□□ -1.08
CDKL5-202ENST00000379996 C1orf220Q5T0J3 134 aa8.29□□□□□ -1.08
CDKL5-202ENST00000379996 TSHZ1Q6ZSZ6 1077 aa8.29□□□□□ -1.08
CDKL5-202ENST00000379996 CACNA2D4Q7Z3S7 1137 aa8.29□□□□□ -1.08
CDKL5-202ENST00000379996 DNAAF5Q86Y56 855 aa8.29□□□□□ -1.08
CDKL5-202ENST00000379996 PLPP7Q8NBV4 271 aa8.29□□□□□ -1.08
CDKL5-202ENST00000379996 U2AF1L4Q8WU68 220 aaKnown RBP8.29□□□□□ -1.08
CDKL5-202ENST00000379996 FBXL18Q96ME1 805 aa8.29□□□□□ -1.08
CDKL5-202ENST00000379996 LRRC4CQ9HCJ2 640 aa8.29□□□□□ -1.08
CDKL5-202ENST00000379996 PTPRHQ9HD43 1115 aa8.29□□□□□ -1.08
CDKL5-202ENST00000379996 PRMT7Q9NVM4 692 aaPredicted RBP8.29□□□□□ -1.08
CDKL5-202ENST00000379996 GOLGA6AQ9NYA3 693 aa8.29□□□□□ -1.08
CDKL5-202ENST00000379996 PCDHA3Q9Y5H8 950 aa8.29□□□□□ -1.08
CDKL5-202ENST00000379996 EVPLQ92817 2033 aa8.28□□□□□ -1.08
CDKL5-202ENST00000379996 PARNO95453 639 aaKnown RBP8.28□□□□□ -1.08
CDKL5-202ENST00000379996 NOP2P46087 812 aaKnown RBP8.28□□□□□ -1.08
CDKL5-202ENST00000379996 PEX3P56589 373 aa8.28□□□□□ -1.08
CDKL5-202ENST00000379996 KYAT1Q16773 422 aa8.28□□□□□ -1.08
CDKL5-202ENST00000379996 ZNF568Q3ZCX4 644 aa8.28□□□□□ -1.08
CDKL5-202ENST00000379996 RUFY4Q6ZNE9 571 aa8.28□□□□□ -1.08
CDKL5-202ENST00000379996 ZBTB8OSQ8IWT0 167 aa8.28□□□□□ -1.08
CDKL5-202ENST00000379996 FAM126BQ8IXS8 530 aa8.28□□□□□ -1.08
CDKL5-202ENST00000379996 METTL13Q8N6R0 699 aa8.28□□□□□ -1.08
CDKL5-202ENST00000379996 FAM76AQ8TAV0 307 aa8.28□□□□□ -1.08
CDKL5-202ENST00000379996 TMEM143Q96AN5 459 aa8.28□□□□□ -1.08
CDKL5-202ENST00000379996 INO80BQ9C086 356 aaPredicted RBP8.28□□□□□ -1.08
CDKL5-202ENST00000379996 SENP6Q9GZR1 1112 aaPredicted RBP8.28□□□□□ -1.08
CDKL5-202ENST00000379996 RNF208Q9H0X6 261 aa8.28□□□□□ -1.08
CDKL5-202ENST00000379996 CWC15Q9P013 229 aaKnown RBP8.28□□□□□ -1.08
CDKL5-202ENST00000379996 SLC12A6Q9UHW9 1150 aa8.28□□□□□ -1.08
CDKL5-202ENST00000379996 NFU1Q9UMS0 254 aa8.28□□□□□ -1.08
CDKL5-202ENST00000379996 ANK1P16157 1881 aa8.28□□□□□ -1.08
CDKL5-202ENST00000379996 ESYT3A0FGR9 886 aa8.28□□□□□ -1.08
CDKL5-202ENST00000379996 ACKR2O00590 384 aa8.28□□□□□ -1.08
CDKL5-202ENST00000379996 ABLIM1O14639 778 aa8.28□□□□□ -1.08
CDKL5-202ENST00000379996 CETN3O15182 167 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms