RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 GNASQ5JWF2 1037 aa13.91□□□□□ -0.18
NPHP4-203ENST00000378169 SH3BP5O60239 455 aa13.91□□□□□ -0.18
NPHP4-203ENST00000378169 ITGA8P53708 1063 aa13.91□□□□□ -0.18
NPHP4-203ENST00000378169 TSPY1Q01534 308 aa13.91□□□□□ -0.18
NPHP4-203ENST00000378169 TRIM42Q8IWZ5 723 aa13.91□□□□□ -0.18
NPHP4-203ENST00000378169 TTC39CQ8N584 583 aa13.91□□□□□ -0.18
NPHP4-203ENST00000378169 ATP8B4Q8TF62 1192 aa13.91□□□□□ -0.18
NPHP4-203ENST00000378169 CCT8L2Q96SF2 557 aa13.91□□□□□ -0.18
NPHP4-203ENST00000378169 KLF6Q99612 283 aaPredicted RBP13.91□□□□□ -0.18
NPHP4-203ENST00000378169 FGFBP2Q9BYJ0 223 aa13.91□□□□□ -0.18
NPHP4-203ENST00000378169 WDR35Q9P2L0 1181 aa13.91□□□□□ -0.18
NPHP4-203ENST00000378169 GTPBP10A4D1E9 387 aaKnown RBP13.91□□□□□ -0.18
NPHP4-203ENST00000378169 H3BQF6 201 aa13.91□□□□□ -0.18
NPHP4-203ENST00000378169 ATP9AO75110 1047 aa13.91□□□□□ -0.18
NPHP4-203ENST00000378169 PRLRP16471 622 aa13.91□□□□□ -0.18
NPHP4-203ENST00000378169 ITIH2P19823 946 aa13.91□□□□□ -0.18
NPHP4-203ENST00000378169 NCF2P19878 526 aaPredicted RBP13.91□□□□□ -0.18
NPHP4-203ENST00000378169 COILP38432 576 aaPredicted RBP13.91□□□□□ -0.18
NPHP4-203ENST00000378169 DLG4P78352 724 aa13.91□□□□□ -0.18
NPHP4-203ENST00000378169 THEM5Q8N1Q8 247 aa13.91□□□□□ -0.18
NPHP4-203ENST00000378169 NCAPGQ9BPX3 1015 aa13.91□□□□□ -0.18
NPHP4-203ENST00000378169 MRIQ9BWK5 157 aa13.91□□□□□ -0.18
NPHP4-203ENST00000378169 RANBP17Q9H2T7 1088 aaKnown RBP13.91□□□□□ -0.18
NPHP4-203ENST00000378169 METTL5Q9NRN9 209 aaKnown RBP13.91□□□□□ -0.18
NPHP4-203ENST00000378169 ADARB2Q9NS39 739 aaKnown RBP13.91□□□□□ -0.18
NPHP4-203ENST00000378169 CCDC195A0A1B0GUA6 201 aa13.91□□□□□ -0.18
NPHP4-203ENST00000378169 CELF2O95319 508 aaKnown RBP13.91□□□□□ -0.18
NPHP4-203ENST00000378169 NPTXRO95502 500 aa13.91□□□□□ -0.18
NPHP4-203ENST00000378169 LAMC2Q13753 1193 aa13.91□□□□□ -0.18
NPHP4-203ENST00000378169 KLHL38Q2WGJ6 581 aa13.91□□□□□ -0.18
NPHP4-203ENST00000378169 MEI1Q5TIA1 1274 aa13.91□□□□□ -0.18
NPHP4-203ENST00000378169 KDELC2Q7Z4H8 507 aa13.91□□□□□ -0.18
NPHP4-203ENST00000378169 MDM1Q8TC05 714 aa13.91□□□□□ -0.18
NPHP4-203ENST00000378169 PPARGC1AQ9UBK2 798 aaKnown RBP13.91□□□□□ -0.18
NPHP4-203ENST00000378169 IPO11Q9UI26 975 aaKnown RBP13.91□□□□□ -0.18
NPHP4-203ENST00000378169 ESRRAP11474 423 aaPredicted RBP13.9□□□□□ -0.18
NPHP4-203ENST00000378169 PPP3CAQ08209 521 aa13.9□□□□□ -0.18
NPHP4-203ENST00000378169 KCNMA1Q12791 1236 aa13.9□□□□□ -0.18
NPHP4-203ENST00000378169 MMEL1Q495T6 779 aa13.9□□□□□ -0.18
NPHP4-203ENST00000378169 APPL2Q8NEU8 664 aa13.9□□□□□ -0.18
NPHP4-203ENST00000378169 PARD3BQ8TEW8 1205 aa13.9□□□□□ -0.18
NPHP4-203ENST00000378169 AFG1LQ8WV93 481 aa13.9□□□□□ -0.18
NPHP4-203ENST00000378169 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.9□□□□□ -0.181e-11■■■■■ 94.4
NPHP4-203ENST00000378169 FAM84AQ96KN4 292 aa13.9□□□□□ -0.18
NPHP4-203ENST00000378169 PRMT1Q99873 361 aaKnown RBP13.9□□□□□ -0.18
NPHP4-203ENST00000378169 VIRMAQ69YN4 1812 aaKnown RBP13.9□□□□□ -0.18
NPHP4-203ENST00000378169 A0A087WZ62 844 aa13.9□□□□□ -0.18
NPHP4-203ENST00000378169 TCP11X1B4DZS4 312 aa13.9□□□□□ -0.18
NPHP4-203ENST00000378169 ATP9BO43861 1147 aa13.9□□□□□ -0.18
NPHP4-203ENST00000378169 CDH16O75309 829 aa13.9□□□□□ -0.18
NPHP4-203ENST00000378169 SPATA31C1P0DKV0 1188 aa13.9□□□□□ -0.18
NPHP4-203ENST00000378169 CHN1P15882 459 aa13.9□□□□□ -0.18
NPHP4-203ENST00000378169 PTPRAP18433 802 aa13.9□□□□□ -0.18
NPHP4-203ENST00000378169 LSP1P33241 339 aa13.9□□□□□ -0.18
NPHP4-203ENST00000378169 SERPINB6P35237 376 aa13.9□□□□□ -0.18
NPHP4-203ENST00000378169 NPY5RQ15761 445 aa13.9□□□□□ -0.18
NPHP4-203ENST00000378169 MAP1SQ66K74 1059 aaPredicted RBP13.9□□□□□ -0.18
NPHP4-203ENST00000378169 EMC1Q8N766 993 aa13.9□□□□□ -0.18
NPHP4-203ENST00000378169 EXT2Q93063 718 aa13.9□□□□□ -0.18
NPHP4-203ENST00000378169 PARK7Q99497 189 aaKnown RBP13.9□□□□□ -0.18
NPHP4-203ENST00000378169 FDXACB1Q9BRP7 624 aaPredicted RBP13.9□□□□□ -0.18
NPHP4-203ENST00000378169 TRIM55Q9BYV6 548 aa13.9□□□□□ -0.18
NPHP4-203ENST00000378169 ANKRD63C9JTQ0 380 aa13.9□□□□□ -0.18
NPHP4-203ENST00000378169 APOL1O14791 398 aa13.9□□□□□ -0.18
NPHP4-203ENST00000378169 MAPK13O15264 365 aa13.9□□□□□ -0.18
NPHP4-203ENST00000378169 CYP3A4P08684 503 aa13.9□□□□□ -0.18
NPHP4-203ENST00000378169 FKBP1CQ5VVH2 108 aa13.9□□□□□ -0.18
NPHP4-203ENST00000378169 CCDC60Q8IWA6 550 aaPredicted RBP13.9□□□□□ -0.18
NPHP4-203ENST00000378169 NUDCD1Q96RS6 583 aa13.9□□□□□ -0.18
NPHP4-203ENST00000378169 VCX3BQ9H321 246 aa13.9□□□□□ -0.18
NPHP4-203ENST00000378169 ATP8B3O60423 1300 aa13.9□□□□□ -0.19
NPHP4-203ENST00000378169 PDE2AO00408 941 aaPredicted RBP13.89□□□□□ -0.19
NPHP4-203ENST00000378169 CALCAP01258 141 aa13.89□□□□□ -0.19
NPHP4-203ENST00000378169 GZMAP12544 262 aa13.89□□□□□ -0.19
NPHP4-203ENST00000378169 MAP2K2P36507 400 aa13.89□□□□□ -0.19
NPHP4-203ENST00000378169 FKBP1AP62942 108 aaKnown RBP13.89□□□□□ -0.19
NPHP4-203ENST00000378169 PHLDB3Q6NSJ2 640 aa13.89□□□□□ -0.19
NPHP4-203ENST00000378169 METTL7BQ6UX53 244 aa13.89□□□□□ -0.19
NPHP4-203ENST00000378169 EP400NLQ6ZTU2 488 aa13.89□□□□□ -0.19
NPHP4-203ENST00000378169 ETNPPLQ8TBG4 499 aa13.89□□□□□ -0.19
NPHP4-203ENST00000378169 ACTR5Q9H9F9 607 aaPredicted RBP13.89□□□□□ -0.19
NPHP4-203ENST00000378169 CHMP2BQ9UQN3 213 aa13.89□□□□□ -0.19
NPHP4-203ENST00000378169 FRMD3A2A2Y4 597 aa13.89□□□□□ -0.19
NPHP4-203ENST00000378169 H0Y3Z8 333 aa13.89□□□□□ -0.19
NPHP4-203ENST00000378169 EIF3HO15372 352 aaKnown RBP eCLIP13.89□□□□□ -0.19
NPHP4-203ENST00000378169 CXCL8P10145 99 aa13.89□□□□□ -0.19
NPHP4-203ENST00000378169 CETPP11597 493 aa13.89□□□□□ -0.19
NPHP4-203ENST00000378169 SLC8A1P32418 973 aa13.89□□□□□ -0.19
NPHP4-203ENST00000378169 DGKDQ16760 1214 aa13.89□□□□□ -0.19
NPHP4-203ENST00000378169 ZNF677Q86XU0 584 aa13.89□□□□□ -0.19
NPHP4-203ENST00000378169 BFARQ9NZS9 450 aa13.89□□□□□ -0.19
NPHP4-203ENST00000378169 RAP1GAPP47736 663 aa13.89□□□□□ -0.19
NPHP4-203ENST00000378169 FAXCQ5TGI0 409 aa13.89□□□□□ -0.19
NPHP4-203ENST00000378169 MFSD14CQ5VZR4 134 aa13.89□□□□□ -0.19
NPHP4-203ENST00000378169 TATDN1Q6P1N9 297 aa13.89□□□□□ -0.19
NPHP4-203ENST00000378169 CCDC33Q8N5R6 958 aa13.89□□□□□ -0.19
NPHP4-203ENST00000378169 TMC2Q8TDI7 906 aa13.89□□□□□ -0.19
NPHP4-203ENST00000378169 PDCD6IPQ8WUM4 868 aaKnown RBP13.89□□□□□ -0.19
NPHP4-203ENST00000378169 RUBCNQ92622 972 aa13.89□□□□□ -0.19
NPHP4-203ENST00000378169 OPTNQ96CV9 577 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms