RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 LOC102724159A0A0B4J2E5 919 aa21.53■■□□□ 1.04
VSX1-202ENST00000376709 B4GALT5O43286 388 aa21.53■■□□□ 1.04
VSX1-202ENST00000376709 GBP1P32455 592 aa21.53■■□□□ 1.04
VSX1-202ENST00000376709 FNTAP49354 379 aa21.53■■□□□ 1.04
VSX1-202ENST00000376709 ATP1A2P50993 1020 aa21.53■■□□□ 1.04
VSX1-202ENST00000376709 IRAK1P51617 712 aa21.53■■□□□ 1.04
VSX1-202ENST00000376709 IGBP1P78318 339 aa21.53■■□□□ 1.04
VSX1-202ENST00000376709 ZNF844Q08AG5 666 aa21.53■■□□□ 1.04
VSX1-202ENST00000376709 PWP2Q15269 919 aaKnown RBP21.53■■□□□ 1.04
VSX1-202ENST00000376709 SIX1Q15475 284 aaPredicted RBP21.53■■□□□ 1.04
VSX1-202ENST00000376709 BRI3BPQ8WY22 251 aa21.53■■□□□ 1.04
VSX1-202ENST00000376709 NIF3L1Q9GZT8 377 aa21.53■■□□□ 1.04
VSX1-202ENST00000376709 TMBIM4Q9HC24 238 aa21.53■■□□□ 1.04
VSX1-202ENST00000376709 PPFIA2O75334 1257 aa21.52■■□□□ 1.04
VSX1-202ENST00000376709 PROSCO94903 275 aa21.52■■□□□ 1.04
VSX1-202ENST00000376709 NR1D1P20393 614 aa21.52■■□□□ 1.04
VSX1-202ENST00000376709 PROZP22891 400 aa21.52■■□□□ 1.04
VSX1-202ENST00000376709 ZNF132P52740 706 aa21.52■■□□□ 1.04
VSX1-202ENST00000376709 GNGT1P63211 74 aa21.52■■□□□ 1.04
VSX1-202ENST00000376709 SKOR1P84550 965 aa21.52■■□□□ 1.04
VSX1-202ENST00000376709 C1QBPQ07021 282 aaKnown RBP21.52■■□□□ 1.04
VSX1-202ENST00000376709 MAMLD1Q13495 774 aa21.52■■□□□ 1.04
VSX1-202ENST00000376709 SGO2Q562F6 1265 aa21.52■■□□□ 1.04
VSX1-202ENST00000376709 CDR2LQ86X02 465 aaPredicted RBP21.52■■□□□ 1.04
VSX1-202ENST00000376709 C12orf50Q8NA57 414 aaPredicted RBP21.52■■□□□ 1.04
VSX1-202ENST00000376709 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.52■■□□□ 1.04
VSX1-202ENST00000376709 FBXO25Q8TCJ0 367 aa21.52■■□□□ 1.04
VSX1-202ENST00000376709 GTF3C2Q8WUA4 911 aaPredicted RBP21.52■■□□□ 1.04
VSX1-202ENST00000376709 FZD8Q9H461 694 aa21.52■■□□□ 1.04
VSX1-202ENST00000376709 RNPEPQ9H4A4 650 aa21.52■■□□□ 1.04
VSX1-202ENST00000376709 PASKQ96RG2 1323 aa21.51■■□□□ 1.03
VSX1-202ENST00000376709 FSCN2O14926 492 aa21.51■■□□□ 1.03
VSX1-202ENST00000376709 ADORA2AP29274 412 aa21.51■■□□□ 1.03
VSX1-202ENST00000376709 RPL21P46778 160 aaKnown RBP21.51■■□□□ 1.03
VSX1-202ENST00000376709 KCNJ1P48048 391 aa21.51■■□□□ 1.03
VSX1-202ENST00000376709 GTF2A2P52657 109 aa21.51■■□□□ 1.03
VSX1-202ENST00000376709 ZNF394Q53GI3 561 aa21.51■■□□□ 1.03
VSX1-202ENST00000376709 GJC2Q5T442 439 aaPredicted RBP21.51■■□□□ 1.03
VSX1-202ENST00000376709 DAB2IPQ5VWQ8 1189 aa21.51■■□□□ 1.03
VSX1-202ENST00000376709 TTC19Q6DKK2 380 aaPredicted RBP21.51■■□□□ 1.03
VSX1-202ENST00000376709 RUFY4Q6ZNE9 571 aa21.51■■□□□ 1.03
VSX1-202ENST00000376709 CISHQ9NSE2 258 aa21.51■■□□□ 1.03
VSX1-202ENST00000376709 PARP2Q9UGN5 583 aa21.51■■□□□ 1.03
VSX1-202ENST00000376709 A6NNZ2 444 aa21.51■■□□□ 1.03
VSX1-202ENST00000376709 ECEL1O95672 775 aa21.51■■□□□ 1.03
VSX1-202ENST00000376709 TNNC2P02585 160 aa21.51■■□□□ 1.03
VSX1-202ENST00000376709 HOXC6P09630 235 aa21.51■■□□□ 1.03
VSX1-202ENST00000376709 CCNA1P78396 465 aa21.51■■□□□ 1.03
VSX1-202ENST00000376709 ZNF699Q32M78 642 aa21.51■■□□□ 1.03
VSX1-202ENST00000376709 TUBB8Q3ZCM7 444 aa21.51■■□□□ 1.03
VSX1-202ENST00000376709 KDM7AQ6ZMT4 941 aa21.51■■□□□ 1.03
VSX1-202ENST00000376709 UBR7Q8N806 425 aa21.51■■□□□ 1.03
VSX1-202ENST00000376709 LRRC19Q9H756 370 aa21.51■■□□□ 1.03
VSX1-202ENST00000376709 PTPRHQ9HD43 1115 aa21.51■■□□□ 1.03
VSX1-202ENST00000376709 PARVAQ9NVD7 372 aa21.51■■□□□ 1.03
VSX1-202ENST00000376709 GRHL1Q9NZI5 618 aa21.51■■□□□ 1.03
VSX1-202ENST00000376709 TLR3O15455 904 aaKnown RBP21.5■■□□□ 1.03
VSX1-202ENST00000376709 ASAP2O43150 1006 aa21.5■■□□□ 1.03
VSX1-202ENST00000376709 MBTD1Q05BQ5 628 aa21.5■■□□□ 1.03
VSX1-202ENST00000376709 PPP1R7Q15435 360 aa21.5■■□□□ 1.03
VSX1-202ENST00000376709 ZNF792Q3KQV3 632 aa21.5■■□□□ 1.03
VSX1-202ENST00000376709 PLEKHA7Q6IQ23 1121 aa21.5■■□□□ 1.03
VSX1-202ENST00000376709 ZDHHC24Q6UX98 284 aa21.5■■□□□ 1.03
VSX1-202ENST00000376709 SCARA5Q6ZMJ2 495 aa21.5■■□□□ 1.03
VSX1-202ENST00000376709 CCDC50Q8IVM0 306 aa21.5■■□□□ 1.03
VSX1-202ENST00000376709 CEP120Q8N960 986 aa21.5■■□□□ 1.03
VSX1-202ENST00000376709 ANKRD36BP1Q96IX9 119 aa21.5■■□□□ 1.03
VSX1-202ENST00000376709 MTRF1LQ9UGC7 380 aaKnown RBP21.5■■□□□ 1.03
VSX1-202ENST00000376709 GRIN2DO15399 1336 aa21.5■■□□□ 1.03
VSX1-202ENST00000376709 UNCXA6NJT0 531 aa21.5■■□□□ 1.03
VSX1-202ENST00000376709 SSR1P43307 286 aaKnown RBP21.5■■□□□ 1.03
VSX1-202ENST00000376709 IFFO1Q0D2I5 559 aa21.5■■□□□ 1.03
VSX1-202ENST00000376709 SPDYCQ5MJ68 293 aa21.5■■□□□ 1.03
VSX1-202ENST00000376709 MAIP1Q8WWC4 291 aa21.5■■□□□ 1.03
VSX1-202ENST00000376709 C1orf54Q8WWF1 131 aa21.5■■□□□ 1.03
VSX1-202ENST00000376709 TXLNGYQ9BZA5 131 aa21.5■■□□□ 1.03
VSX1-202ENST00000376709 MINDY3Q9H8M7 445 aa21.5■■□□□ 1.03
VSX1-202ENST00000376709 PLXNA1Q9UIW2 1896 aa21.49■■□□□ 1.03
VSX1-202ENST00000376709 C22orf31O95567 290 aa21.49■■□□□ 1.03
VSX1-202ENST00000376709 WEE2P0C1S8 567 aa21.49■■□□□ 1.03
VSX1-202ENST00000376709 ARHGAP1Q07960 439 aa21.49■■□□□ 1.03
VSX1-202ENST00000376709 PTP4A2Q12974 167 aa21.49■■□□□ 1.03
VSX1-202ENST00000376709 LAMC2Q13753 1193 aa21.49■■□□□ 1.03
VSX1-202ENST00000376709 EEF1DP3Q658K8 133 aa21.49■■□□□ 1.03
VSX1-202ENST00000376709 RHOT1Q8IXI2 618 aa21.49■■□□□ 1.03
VSX1-202ENST00000376709 DDX27Q96GQ7 796 aaKnown RBP21.49■■□□□ 1.03
VSX1-202ENST00000376709 GBA2Q9HCG7 927 aaPredicted RBP21.49■■□□□ 1.03
VSX1-202ENST00000376709 BCCIPQ9P287 314 aaKnown RBP eCLIP21.49■■□□□ 1.03
VSX1-202ENST00000376709 USTQ9Y2C2 406 aa21.49■■□□□ 1.03
VSX1-202ENST00000376709 PLXNB2O15031 1838 aa21.49■■□□□ 1.03
VSX1-202ENST00000376709 EIF3HO15372 352 aaKnown RBP eCLIP21.48■■□□□ 1.03
VSX1-202ENST00000376709 PSTPIP1O43586 416 aa21.48■■□□□ 1.03
VSX1-202ENST00000376709 LGALS2P05162 132 aa21.48■■□□□ 1.03
VSX1-202ENST00000376709 INSRRP14616 1297 aa21.48■■□□□ 1.03
VSX1-202ENST00000376709 MMP8P22894 467 aa21.48■■□□□ 1.03
VSX1-202ENST00000376709 BRD2P25440 801 aaKnown RBP21.48■■□□□ 1.03
VSX1-202ENST00000376709 HPDP32754 393 aaPredicted RBP21.48■■□□□ 1.03
VSX1-202ENST00000376709 PHKA2P46019 1235 aa21.48■■□□□ 1.03
VSX1-202ENST00000376709 PMS2P54278 862 aa21.48■■□□□ 1.03
VSX1-202ENST00000376709 PDCLQ13371 301 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms