RNA–Protein interactions for RNA: ENST00000376093.6

LST1-208, leukocyte specific transcript 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LST1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LST1-208ENST00000376093 NOTUMQ6P988 496 aa13.15□□□□□ -0.3
LST1-208ENST00000376093 SYCE2Q6PIF2 218 aa13.15□□□□□ -0.3
LST1-208ENST00000376093 TMEM184AQ6ZMB5 413 aa13.15□□□□□ -0.3
LST1-208ENST00000376093 MRPL10Q7Z7H8 261 aaKnown RBP13.15□□□□□ -0.3
LST1-208ENST00000376093 CDR2LQ86X02 465 aaPredicted RBP13.15□□□□□ -0.3
LST1-208ENST00000376093 CATSPER3Q86XQ3 398 aa13.15□□□□□ -0.3
LST1-208ENST00000376093 TMEM87AQ8NBN3 555 aa13.15□□□□□ -0.3
LST1-208ENST00000376093 SMG8Q8ND04 991 aaKnown RBP13.15□□□□□ -0.3
LST1-208ENST00000376093 CASP10Q92851 521 aa13.15□□□□□ -0.3
LST1-208ENST00000376093 PHF7Q9BWX1 381 aaPredicted RBP13.15□□□□□ -0.3
LST1-208ENST00000376093 FOXP1Q9H334 677 aaPredicted RBP13.15□□□□□ -0.3
LST1-208ENST00000376093 SH2B1Q9NRF2 756 aaPredicted RBP13.15□□□□□ -0.3
LST1-208ENST00000376093 CDH22Q9UJ99 828 aa13.15□□□□□ -0.3
LST1-208ENST00000376093 IPPQ9Y573 584 aa13.15□□□□□ -0.3
LST1-208ENST00000376093 HCFC2Q9Y5Z7 792 aa13.15□□□□□ -0.3
LST1-208ENST00000376093 A0A0A0MRY4 1105 aa13.14□□□□□ -0.31
LST1-208ENST00000376093 LRRIQ4A6NIV6 560 aa13.14□□□□□ -0.31
LST1-208ENST00000376093 LOC730098B7Z3J9 87 aa13.14□□□□□ -0.31
LST1-208ENST00000376093 ARF4P18085 180 aaPredicted RBP13.14□□□□□ -0.31
LST1-208ENST00000376093 AXLP30530 894 aa13.14□□□□□ -0.31
LST1-208ENST00000376093 MLH1P40692 756 aa13.14□□□□□ -0.31
LST1-208ENST00000376093 RBM25P49756 843 aaKnown RBP13.14□□□□□ -0.31
LST1-208ENST00000376093 NCBP1Q09161 790 aaKnown RBP13.14□□□□□ -0.31
LST1-208ENST00000376093 CBX2Q14781 532 aaPredicted RBP13.14□□□□□ -0.31
LST1-208ENST00000376093 DDX53Q86TM3 631 aaKnown RBP13.14□□□□□ -0.31
LST1-208ENST00000376093 NOSTRINQ8IVI9 506 aa13.14□□□□□ -0.31
LST1-208ENST00000376093 FBXL6Q8N531 539 aa13.14□□□□□ -0.31
LST1-208ENST00000376093 FBXO18Q8NFZ0 1043 aa13.14□□□□□ -0.31
LST1-208ENST00000376093 ERMNQ8TAM6 284 aa13.14□□□□□ -0.31
LST1-208ENST00000376093 SUSD6Q92537 303 aa13.14□□□□□ -0.31
LST1-208ENST00000376093 VN1R3Q9BXE9 311 aa13.14□□□□□ -0.31
LST1-208ENST00000376093 TRIM6Q9C030 488 aaPredicted RBP13.14□□□□□ -0.31
LST1-208ENST00000376093 CSRNP2Q9H175 543 aa13.14□□□□□ -0.31
LST1-208ENST00000376093 S1PR5Q9H228 398 aa13.14□□□□□ -0.31
LST1-208ENST00000376093 NXF3Q9H4D5 531 aaKnown RBP13.14□□□□□ -0.31
LST1-208ENST00000376093 TUFT1Q9NNX1 390 aa13.14□□□□□ -0.31
LST1-208ENST00000376093 NOL7Q9UMY1 257 aaKnown RBP13.14□□□□□ -0.31
LST1-208ENST00000376093 NRP1O14786 923 aa13.13□□□□□ -0.31
LST1-208ENST00000376093 NPTXRO95502 500 aa13.13□□□□□ -0.31
LST1-208ENST00000376093 CTSAP10619 480 aa13.13□□□□□ -0.31
LST1-208ENST00000376093 EPCAMP16422 314 aa13.13□□□□□ -0.31
LST1-208ENST00000376093 VCPP55072 806 aaKnown RBP13.13□□□□□ -0.31
LST1-208ENST00000376093 POU5F1BQ06416 359 aa13.13□□□□□ -0.31
LST1-208ENST00000376093 PCBP1Q15365 356 aaKnown RBP eCLIP13.13□□□□□ -0.31
LST1-208ENST00000376093 ATCAYQ86WG3 371 aa13.13□□□□□ -0.31
LST1-208ENST00000376093 CNNM3Q8NE01 707 aa13.13□□□□□ -0.31
LST1-208ENST00000376093 ATOH1Q92858 354 aaPredicted RBP13.13□□□□□ -0.31
LST1-208ENST00000376093 CCDC51Q96ER9 411 aa13.13□□□□□ -0.31
LST1-208ENST00000376093 GAD1Q99259 594 aa13.13□□□□□ -0.31
LST1-208ENST00000376093 POLR3CQ9BUI4 534 aaPredicted RBP13.13□□□□□ -0.31
LST1-208ENST00000376093 UBN1Q9NPG3 1134 aa13.13□□□□□ -0.31
LST1-208ENST00000376093 DBR1Q9UK59 544 aaKnown RBP13.13□□□□□ -0.31
LST1-208ENST00000376093 FAN1Q9Y2M0 1017 aa13.13□□□□□ -0.31
LST1-208ENST00000376093 PRG3Q9Y2Y8 225 aaPredicted RBP13.13□□□□□ -0.31
LST1-208ENST00000376093 ARHGEF35A5YM69 484 aa13.12□□□□□ -0.31
LST1-208ENST00000376093 ARL5CA6NH57 179 aa13.12□□□□□ -0.31
LST1-208ENST00000376093 WEE2P0C1S8 567 aa13.12□□□□□ -0.31
LST1-208ENST00000376093 XRCC6P12956 609 aaKnown RBP eCLIP13.12□□□□□ -0.31
LST1-208ENST00000376093 HOXB8P17481 243 aaPredicted RBP13.12□□□□□ -0.31
LST1-208ENST00000376093 LIG1P18858 919 aa13.12□□□□□ -0.31
LST1-208ENST00000376093 AKAP5P24588 427 aa13.12□□□□□ -0.31
LST1-208ENST00000376093 OR1G1P47890 313 aa13.12□□□□□ -0.31
LST1-208ENST00000376093 SCNN1GP51170 649 aa13.12□□□□□ -0.31
LST1-208ENST00000376093 ZXDAP98168 799 aa13.12□□□□□ -0.31
LST1-208ENST00000376093 ORC2Q13416 577 aaPredicted RBP13.12□□□□□ -0.31
LST1-208ENST00000376093 PTPN14Q15678 1187 aa13.12□□□□□ -0.31
LST1-208ENST00000376093 RARS2Q5T160 578 aaKnown RBP13.12□□□□□ -0.31
LST1-208ENST00000376093 SLC27A1Q6PCB7 646 aa13.12□□□□□ -0.31
LST1-208ENST00000376093 ELMSAN1Q6PJG2 1045 aa13.12□□□□□ -0.31
LST1-208ENST00000376093 C12orf76Q8N812 135 aaPredicted RBP13.12□□□□□ -0.31
LST1-208ENST00000376093 MCPH1Q8NEM0 835 aa13.12□□□□□ -0.31
LST1-208ENST00000376093 OR13H1Q8NG92 308 aa13.12□□□□□ -0.31
LST1-208ENST00000376093 NACC1Q96RE7 527 aa13.12□□□□□ -0.31
LST1-208ENST00000376093 TMEM175Q9BSA9 504 aa13.12□□□□□ -0.31
LST1-208ENST00000376093 NFKBIZQ9BYH8 718 aa13.12□□□□□ -0.31
LST1-208ENST00000376093 KANSL3Q9P2N6 904 aa13.12□□□□□ -0.31
LST1-208ENST00000376093 ALDH2P05091 517 aa13.11□□□□□ -0.31
LST1-208ENST00000376093 RPA1P27694 616 aa13.11□□□□□ -0.31
LST1-208ENST00000376093 CCT6AP40227 531 aaKnown RBP13.11□□□□□ -0.31
LST1-208ENST00000376093 GIT2Q14161 759 aa13.11□□□□□ -0.31
LST1-208ENST00000376093 HAUS3Q68CZ6 603 aa13.11□□□□□ -0.31
LST1-208ENST00000376093 CES5AQ6NT32 575 aa13.11□□□□□ -0.31
LST1-208ENST00000376093 ZBTB8OSQ8IWT0 167 aa13.11□□□□□ -0.31
LST1-208ENST00000376093 COLGALT2Q8IYK4 626 aa13.11□□□□□ -0.31
LST1-208ENST00000376093 HACE1Q8IYU2 909 aa13.11□□□□□ -0.31
LST1-208ENST00000376093 BSNDQ8WZ55 320 aa13.11□□□□□ -0.31
LST1-208ENST00000376093 NSUN5Q96P11 429 aaKnown RBP13.11□□□□□ -0.31
LST1-208ENST00000376093 SMG9Q9H0W8 520 aaKnown RBP13.11□□□□□ -0.31
LST1-208ENST00000376093 POMKQ9H5K3 350 aa13.11□□□□□ -0.31
LST1-208ENST00000376093 POLD4Q9HCU8 107 aa13.11□□□□□ -0.31
LST1-208ENST00000376093 MARCH5Q9NX47 278 aa13.11□□□□□ -0.31
LST1-208ENST00000376093 MIOSQ9NXC5 875 aa13.11□□□□□ -0.31
LST1-208ENST00000376093 LRWD1Q9UFC0 647 aa13.11□□□□□ -0.31
LST1-208ENST00000376093 PARP2Q9UGN5 583 aa13.11□□□□□ -0.31
LST1-208ENST00000376093 USTQ9Y2C2 406 aa13.11□□□□□ -0.31
LST1-208ENST00000376093 DENND4AQ7Z401 1863 aa13.1□□□□□ -0.31
LST1-208ENST00000376093 F8W810 466 aa13.1□□□□□ -0.31
LST1-208ENST00000376093 H0Y858 1186 aa13.1□□□□□ -0.31
LST1-208ENST00000376093 J3QW42 95 aa13.1□□□□□ -0.31
LST1-208ENST00000376093 NPR3P17342 541 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms