RNA–Protein interactions for RNA: ENST00000375405.7

SCN1A-202, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,097 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-202ENST00000375405 ACADSP16219 412 aa4.85□□□□□ -1.63
SCN1A-202ENST00000375405 WARSP23381 471 aaKnown RBP4.85□□□□□ -1.63
SCN1A-202ENST00000375405 TALDO1P37837 337 aa4.85□□□□□ -1.63
SCN1A-202ENST00000375405 CASP9P55211 416 aa4.85□□□□□ -1.63
SCN1A-202ENST00000375405 LGALS3BPQ08380 585 aa4.85□□□□□ -1.63
SCN1A-202ENST00000375405 ZNF57Q68EA5 555 aaPredicted RBP4.85□□□□□ -1.63
SCN1A-202ENST00000375405 IL31Q6EBC2 164 aa4.85□□□□□ -1.63
SCN1A-202ENST00000375405 OR2L5Q8NG80 312 aa4.85□□□□□ -1.63
SCN1A-202ENST00000375405 ZNF354BQ96LW1 612 aa4.85□□□□□ -1.63
SCN1A-202ENST00000375405 QKIQ96PU8 341 aaKnown RBP eCLIP4.85□□□□□ -1.637e-7■■■■□ 21.5
SCN1A-202ENST00000375405 POLR1BQ9H9Y6 1135 aa4.85□□□□□ -1.63
SCN1A-202ENST00000375405 RSL24D1Q9UHA3 163 aaKnown RBP4.85□□□□□ -1.63
SCN1A-202ENST00000375405 PLCL2Q9UPR0 1127 aa4.85□□□□□ -1.63
SCN1A-202ENST00000375405 PCDHGA6Q9Y5G7 932 aa4.85□□□□□ -1.63
SCN1A-202ENST00000375405 HEY1Q9Y5J3 304 aa4.85□□□□□ -1.63
SCN1A-202ENST00000375405 HS6ST1O60243 411 aa4.85□□□□□ -1.63
SCN1A-202ENST00000375405 SLC25A12O75746 678 aa4.85□□□□□ -1.63
SCN1A-202ENST00000375405 ASNSP08243 561 aa4.85□□□□□ -1.63
SCN1A-202ENST00000375405 RBP3P10745 1247 aa4.85□□□□□ -1.63
SCN1A-202ENST00000375405 GYS1P13807 737 aa4.85□□□□□ -1.63
SCN1A-202ENST00000375405 SMCO1Q147U7 214 aa4.85□□□□□ -1.63
SCN1A-202ENST00000375405 EZH2Q15910 746 aaKnown RBP4.85□□□□□ -1.63
SCN1A-202ENST00000375405 AGMOQ6ZNB7 445 aa4.85□□□□□ -1.63
SCN1A-202ENST00000375405 ERICH1Q86X53 443 aa4.85□□□□□ -1.63
SCN1A-202ENST00000375405 CACTIN-AS1Q8N1I8 211 aa4.85□□□□□ -1.63
SCN1A-202ENST00000375405 PJA1Q8NG27 643 aa4.85□□□□□ -1.63
SCN1A-202ENST00000375405 BTBD6Q96KE9 485 aa4.85□□□□□ -1.63
SCN1A-202ENST00000375405 CHID1Q9BWS9 393 aa4.85□□□□□ -1.63
SCN1A-202ENST00000375405 FANCEQ9HB96 536 aa4.85□□□□□ -1.63
SCN1A-202ENST00000375405 FAM207AQ9NSI2 230 aaPredicted RBP4.85□□□□□ -1.63
SCN1A-202ENST00000375405 SHOC2Q9UQ13 582 aa4.85□□□□□ -1.63
SCN1A-202ENST00000375405 SYNRGQ9UMZ2 1314 aa4.85□□□□□ -1.63
SCN1A-202ENST00000375405 ANKRD34BA5PLL1 514 aa4.85□□□□□ -1.63
SCN1A-202ENST00000375405 OR5H15A6NDH6 313 aa4.85□□□□□ -1.63
SCN1A-202ENST00000375405 OR5H14A6NHG9 310 aa4.85□□□□□ -1.63
SCN1A-202ENST00000375405 OR5H1A6NKK0 313 aa4.85□□□□□ -1.63
SCN1A-202ENST00000375405 TRIM64CA6NLI5 447 aa4.85□□□□□ -1.63
SCN1A-202ENST00000375405 PARNO95453 639 aaKnown RBP4.85□□□□□ -1.63
SCN1A-202ENST00000375405 FTLP02792 175 aaPredicted RBP4.85□□□□□ -1.63
SCN1A-202ENST00000375405 IL6P05231 212 aa4.85□□□□□ -1.63
SCN1A-202ENST00000375405 CNPP09543 421 aaKnown RBP4.85□□□□□ -1.63
SCN1A-202ENST00000375405 PIK3R1P27986 724 aa4.85□□□□□ -1.63
SCN1A-202ENST00000375405 DEFA1P59665 94 aa4.85□□□□□ -1.63
SCN1A-202ENST00000375405 DEFA3P59666 94 aa4.85□□□□□ -1.63
SCN1A-202ENST00000375405 MYL5Q02045 173 aa4.85□□□□□ -1.63
SCN1A-202ENST00000375405 SLC34A1Q06495 639 aa4.85□□□□□ -1.63
SCN1A-202ENST00000375405 CAMK2GQ13555 558 aaPredicted RBP4.85□□□□□ -1.63
SCN1A-202ENST00000375405 RFX8Q6ZV50 586 aa4.85□□□□□ -1.63
SCN1A-202ENST00000375405 CCDC115Q96NT0 180 aa4.85□□□□□ -1.63
SCN1A-202ENST00000375405 TNKS2Q9H2K2 1166 aa4.85□□□□□ -1.63
SCN1A-202ENST00000375405 ZNF112Q9UJU3 913 aa4.85□□□□□ -1.63
SCN1A-202ENST00000375405 CCNL1Q9UK58 526 aaPredicted RBP4.85□□□□□ -1.63
SCN1A-202ENST00000375405 KIAA1257Q9ULG3 409 aa4.85□□□□□ -1.63
SCN1A-202ENST00000375405 FYCO1Q9BQS8 1478 aa4.85□□□□□ -1.63
SCN1A-202ENST00000375405 WWP2O00308 870 aa4.85□□□□□ -1.63
SCN1A-202ENST00000375405 STX16O14662 325 aa4.85□□□□□ -1.63
SCN1A-202ENST00000375405 CHUKO15111 745 aa4.85□□□□□ -1.63
SCN1A-202ENST00000375405 RB1P06400 928 aa4.85□□□□□ -1.63
SCN1A-202ENST00000375405 ESRRAP11474 423 aaPredicted RBP4.85□□□□□ -1.63
SCN1A-202ENST00000375405 ALDH9A1P49189 494 aa4.85□□□□□ -1.63
SCN1A-202ENST00000375405 NUMBP49757 651 aa4.85□□□□□ -1.63
SCN1A-202ENST00000375405 MYBPC1Q00872 1141 aa4.85□□□□□ -1.63
SCN1A-202ENST00000375405 CDC73Q6P1J9 531 aa4.85□□□□□ -1.63
SCN1A-202ENST00000375405 CATSPER4Q7RTX7 472 aa4.85□□□□□ -1.63
SCN1A-202ENST00000375405 RASSF3Q86WH2 238 aa4.85□□□□□ -1.63
SCN1A-202ENST00000375405 CHURC1Q8WUH1 139 aa4.85□□□□□ -1.63
SCN1A-202ENST00000375405 FBXW5Q969U6 566 aa4.85□□□□□ -1.63
SCN1A-202ENST00000375405 PTERQ96BW5 349 aa4.85□□□□□ -1.63
SCN1A-202ENST00000375405 DSN1Q9H410 356 aa4.85□□□□□ -1.63
SCN1A-202ENST00000375405 LRFN1Q9P244 771 aa4.85□□□□□ -1.63
SCN1A-202ENST00000375405 HEY2Q9UBP5 337 aa4.85□□□□□ -1.63
SCN1A-202ENST00000375405 ATF5Q9Y2D1 282 aaPredicted RBP4.85□□□□□ -1.63
SCN1A-202ENST00000375405 MAST3O60307 1309 aa4.85□□□□□ -1.63
SCN1A-202ENST00000375405 SMNDC1O75940 238 aaKnown RBP eCLIP4.84□□□□□ -1.63
SCN1A-202ENST00000375405 HSMCR30P0CW71 290 aa4.84□□□□□ -1.63
SCN1A-202ENST00000375405 DBTP11182 482 aaKnown RBP4.84□□□□□ -1.63
SCN1A-202ENST00000375405 GSPT1P15170 499 aaKnown RBP4.84□□□□□ -1.63
SCN1A-202ENST00000375405 RCVRNP35243 200 aa4.84□□□□□ -1.63
SCN1A-202ENST00000375405 CTCFP49711 727 aaPredicted RBP4.84□□□□□ -1.63
SCN1A-202ENST00000375405 RPL19P84098 196 aaKnown RBP4.84□□□□□ -1.63
SCN1A-202ENST00000375405 TSNQ15631 228 aaKnown RBP4.84□□□□□ -1.63
SCN1A-202ENST00000375405 NRSN1Q8IZ57 195 aa4.84□□□□□ -1.63
SCN1A-202ENST00000375405 NT5C1AQ9BXI3 368 aa4.84□□□□□ -1.63
SCN1A-202ENST00000375405 NLNQ9BYT8 704 aa4.84□□□□□ -1.63
SCN1A-202ENST00000375405 VPS11Q9H270 941 aa4.84□□□□□ -1.63
SCN1A-202ENST00000375405 NGRNQ9NPE2 291 aaKnown RBP4.84□□□□□ -1.63
SCN1A-202ENST00000375405 TMEM138Q9NPI0 162 aa4.84□□□□□ -1.63
SCN1A-202ENST00000375405 KLHL11Q9NVR0 708 aa4.84□□□□□ -1.63
SCN1A-202ENST00000375405 GNG13Q9P2W3 67 aa4.84□□□□□ -1.63
SCN1A-202ENST00000375405 STK17AQ9UEE5 414 aa4.84□□□□□ -1.63
SCN1A-202ENST00000375405 RBM8AQ9Y5S9 174 aaKnown RBP4.84□□□□□ -1.63
SCN1A-202ENST00000375405 AP1M2Q9Y6Q5 423 aa4.84□□□□□ -1.63
SCN1A-202ENST00000375405 RTEL1-TNFRSF6BF6WH68 1400 aa4.84□□□□□ -1.63
SCN1A-202ENST00000375405 ANO9A1A5B4 782 aa4.84□□□□□ -1.63
SCN1A-202ENST00000375405 AIM2O14862 343 aa4.84□□□□□ -1.63
SCN1A-202ENST00000375405 PGK2P07205 417 aa4.84□□□□□ -1.63
SCN1A-202ENST00000375405 FSHRP23945 695 aa4.84□□□□□ -1.63
SCN1A-202ENST00000375405 RGS2P41220 211 aa4.84□□□□□ -1.63
SCN1A-202ENST00000375405 NAMPTP43490 491 aa4.84□□□□□ -1.63
SCN1A-202ENST00000375405 BCAMP50895 628 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms