RNA–Protein interactions for RNA: ENST00000374826.8

PMS1-202, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best) BASIC

Gene PMS1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-202ENST00000374826 TOGARAM1Q9Y4F4 1720 aa5.82□□□□□ -1.48
PMS1-202ENST00000374826 NSD2O96028 1365 aa5.81□□□□□ -1.48
PMS1-202ENST00000374826 MAP3K19Q56UN5 1328 aa5.81□□□□□ -1.48
PMS1-202ENST00000374826 PRAMEF4O60810 478 aa5.81□□□□□ -1.48
PMS1-202ENST00000374826 LTA4HP09960 611 aaKnown RBP5.81□□□□□ -1.48
PMS1-202ENST00000374826 GYPEP15421 78 aa5.81□□□□□ -1.48
PMS1-202ENST00000374826 TNNT2P45379 298 aaPredicted RBP5.81□□□□□ -1.48
PMS1-202ENST00000374826 MEF2AQ02078 507 aaPredicted RBP5.81□□□□□ -1.48
PMS1-202ENST00000374826 RRS1Q15050 365 aaKnown RBP5.81□□□□□ -1.48
PMS1-202ENST00000374826 FSCN1Q16658 493 aaKnown RBP5.81□□□□□ -1.48
PMS1-202ENST00000374826 UGT8Q16880 541 aa5.81□□□□□ -1.48
PMS1-202ENST00000374826 COLEC12Q5KU26 742 aa5.81□□□□□ -1.48
PMS1-202ENST00000374826 ARHGEF25Q86VW2 580 aa5.81□□□□□ -1.48
PMS1-202ENST00000374826 AFAP1L2Q8N4X5 818 aa5.81□□□□□ -1.48
PMS1-202ENST00000374826 EAF2Q96CJ1 260 aaPredicted RBP5.81□□□□□ -1.48
PMS1-202ENST00000374826 IL17RAQ96F46 866 aa5.81□□□□□ -1.48
PMS1-202ENST00000374826 NAF1Q96HR8 494 aaKnown RBP5.81□□□□□ -1.48
PMS1-202ENST00000374826 SLC46A2Q9BY10 475 aa5.81□□□□□ -1.48
PMS1-202ENST00000374826 ADARB2Q9NS39 739 aaKnown RBP5.81□□□□□ -1.48
PMS1-202ENST00000374826 EIF2B4Q9UI10 523 aaKnown RBP5.81□□□□□ -1.48
PMS1-202ENST00000374826 NHSQ6T4R5 1651 aa5.81□□□□□ -1.48
PMS1-202ENST00000374826 BLMP54132 1417 aaPredicted RBP5.81□□□□□ -1.48
PMS1-202ENST00000374826 CRB1P82279 1406 aa5.81□□□□□ -1.48
PMS1-202ENST00000374826 RTL1A6NKG5 1358 aa5.8□□□□□ -1.48
PMS1-202ENST00000374826 TMEM127O75204 238 aa5.8□□□□□ -1.48
PMS1-202ENST00000374826 GZMKP49863 264 aa5.8□□□□□ -1.48
PMS1-202ENST00000374826 EVA1CP58658 441 aa5.8□□□□□ -1.48
PMS1-202ENST00000374826 RBM6P78332 1123 aaKnown RBP5.8□□□□□ -1.48
PMS1-202ENST00000374826 MRPL49Q13405 166 aaKnown RBP5.8□□□□□ -1.48
PMS1-202ENST00000374826 UBE3CQ15386 1083 aa5.8□□□□□ -1.48
PMS1-202ENST00000374826 VPS72Q15906 364 aa5.8□□□□□ -1.48
PMS1-202ENST00000374826 CC2D1BQ5T0F9 858 aaKnown RBP5.8□□□□□ -1.48
PMS1-202ENST00000374826 IQSEC1Q6DN90 963 aa5.8□□□□□ -1.48
PMS1-202ENST00000374826 FAM83AQ86UY5 434 aa5.8□□□□□ -1.48
PMS1-202ENST00000374826 GLB1L3Q8NCI6 653 aaPredicted RBP5.8□□□□□ -1.48
PMS1-202ENST00000374826 LTV1Q96GA3 475 aaPredicted RBP5.8□□□□□ -1.48
PMS1-202ENST00000374826 NDC1Q9BTX1 674 aa5.8□□□□□ -1.48
PMS1-202ENST00000374826 SERHL2Q9H4I8 314 aa5.8□□□□□ -1.48
PMS1-202ENST00000374826 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.8□□□□□ -1.48
PMS1-202ENST00000374826 KNSTRNQ9Y448 316 aa5.8□□□□□ -1.48
PMS1-202ENST00000374826 TAF1LQ8IZX4 1826 aa5.8□□□□□ -1.48
PMS1-202ENST00000374826 SMG6Q86US8 1419 aaKnown RBP5.8□□□□□ -1.48
PMS1-202ENST00000374826 FLT4P35916 1363 aa5.8□□□□□ -1.48
PMS1-202ENST00000374826 SPATA31A1Q5TZJ5 1347 aa5.79□□□□□ -1.48
PMS1-202ENST00000374826 SPATA31A5Q5VU36 1347 aa5.79□□□□□ -1.48
PMS1-202ENST00000374826 SPATA31A7Q8IWB4 1347 aa5.79□□□□□ -1.48
PMS1-202ENST00000374826 WDR17Q8IZU2 1322 aa5.79□□□□□ -1.48
PMS1-202ENST00000374826 RREB1Q92766 1687 aa5.79□□□□□ -1.48
PMS1-202ENST00000374826 TUBGCP6Q96RT7 1819 aa5.79□□□□□ -1.48
PMS1-202ENST00000374826 TMEM200CA6NKL6 621 aa5.79□□□□□ -1.48
PMS1-202ENST00000374826 LPXNO60711 386 aa5.79□□□□□ -1.48
PMS1-202ENST00000374826 DNAJC6O75061 913 aa5.79□□□□□ -1.48
PMS1-202ENST00000374826 ENPP1P22413 925 aa5.79□□□□□ -1.48
PMS1-202ENST00000374826 CD38P28907 300 aa5.79□□□□□ -1.48
PMS1-202ENST00000374826 HOXC9P31274 260 aa5.79□□□□□ -1.48
PMS1-202ENST00000374826 AMPHP49418 695 aa5.79□□□□□ -1.48
PMS1-202ENST00000374826 CLK3P49761 638 aaKnown RBP5.79□□□□□ -1.48
PMS1-202ENST00000374826 USP14P54578 494 aa5.79□□□□□ -1.48
PMS1-202ENST00000374826 FAM189BP81408 668 aa5.79□□□□□ -1.48
PMS1-202ENST00000374826 TMPRSS15P98073 1019 aa5.79□□□□□ -1.48
PMS1-202ENST00000374826 STAT4Q14765 748 aa5.79□□□□□ -1.48
PMS1-202ENST00000374826 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.79□□□□□ -1.48
PMS1-202ENST00000374826 ZKSCAN2Q63HK3 967 aa5.79□□□□□ -1.48
PMS1-202ENST00000374826 ABHD15Q6UXT9 468 aa5.79□□□□□ -1.48
PMS1-202ENST00000374826 Q6YL49 198 aa5.79□□□□□ -1.48
PMS1-202ENST00000374826 TOM1L2Q6ZVM7 507 aa5.79□□□□□ -1.48
PMS1-202ENST00000374826 OR52N2Q8NGI0 321 aa5.79□□□□□ -1.48
PMS1-202ENST00000374826 SNX33Q8WV41 574 aa5.79□□□□□ -1.48
PMS1-202ENST00000374826 RAX2Q96IS3 184 aa5.79□□□□□ -1.48
PMS1-202ENST00000374826 CPEB1Q9BZB8 566 aaKnown RBP5.79□□□□□ -1.48
PMS1-202ENST00000374826 EDARQ9UNE0 448 aa5.79□□□□□ -1.48
PMS1-202ENST00000374826 COX11Q9Y6N1 276 aa5.79□□□□□ -1.48
PMS1-202ENST00000374826 RGPD3A6NKT7 1758 aaPredicted RBP5.79□□□□□ -1.48
PMS1-202ENST00000374826 RGPD4Q7Z3J3 1758 aa5.79□□□□□ -1.48
PMS1-202ENST00000374826 NUP188Q5SRE5 1749 aa5.79□□□□□ -1.48
PMS1-202ENST00000374826 COL3A1P02461 1466 aaPredicted RBP5.78□□□□□ -1.48
PMS1-202ENST00000374826 SIPA1L3O60292 1781 aaPredicted RBP5.78□□□□□ -1.48
PMS1-202ENST00000374826 PPM1GO15355 546 aaPredicted RBP5.78□□□□□ -1.48
PMS1-202ENST00000374826 CPEP16870 476 aa5.78□□□□□ -1.48
PMS1-202ENST00000374826 CNGA1P29973 690 aa5.78□□□□□ -1.48
PMS1-202ENST00000374826 DDX10Q13206 875 aaKnown RBP5.78□□□□□ -1.48
PMS1-202ENST00000374826 C19orf54Q5BKX5 351 aa5.78□□□□□ -1.48
PMS1-202ENST00000374826 KRT26Q7Z3Y9 468 aa5.78□□□□□ -1.48
PMS1-202ENST00000374826 MORC1Q86VD1 984 aa5.78□□□□□ -1.48
PMS1-202ENST00000374826 LILRA3Q8N6C8 439 aaPredicted RBP5.78□□□□□ -1.48
PMS1-202ENST00000374826 PAWRQ96IZ0 340 aaKnown RBP5.78□□□□□ -1.48
PMS1-202ENST00000374826 LSM14BQ9BX40 385 aaKnown RBP5.78□□□□□ -1.48
PMS1-202ENST00000374826 WDR11Q9BZH6 1224 aa5.78□□□□□ -1.48
PMS1-202ENST00000374826 ANKFY1Q9P2R3 1169 aa5.78□□□□□ -1.48
PMS1-202ENST00000374826 DPP7Q9UHL4 492 aa5.78□□□□□ -1.48
PMS1-202ENST00000374826 MEGF6O75095 1541 aa5.78□□□□□ -1.48
PMS1-202ENST00000374826 INSRP06213 1382 aa5.78□□□□□ -1.48
PMS1-202ENST00000374826 LY75O60449 1722 aa5.77□□□□□ -1.49
PMS1-202ENST00000374826 DISP2A7MBM2 1401 aa5.77□□□□□ -1.49
PMS1-202ENST00000374826 TNS2Q63HR2 1409 aa5.77□□□□□ -1.49
PMS1-202ENST00000374826 GOLGA8AA7E2F4 631 aa5.77□□□□□ -1.49
PMS1-202ENST00000374826 EYA4O95677 639 aa5.77□□□□□ -1.49
PMS1-202ENST00000374826 ZNF37AP17032 561 aaPredicted RBP5.77□□□□□ -1.49
PMS1-202ENST00000374826 CTSSP25774 331 aa5.77□□□□□ -1.49
PMS1-202ENST00000374826 APOBEC3AP31941 199 aaPredicted RBP5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 288.8 ms